RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 GTF3C2Q8WUA4 911 aaPredicted RBP12.4□□□□□ -0.42
COMMD4-209ENST00000564068 STARD8Q92502 1023 aa12.4□□□□□ -0.42
COMMD4-209ENST00000564068 PIK3R3Q92569 461 aa12.4□□□□□ -0.42
COMMD4-209ENST00000564068 PHOX2BQ99453 314 aa12.4□□□□□ -0.42
COMMD4-209ENST00000564068 ITPAQ9BY32 194 aa12.4□□□□□ -0.42
COMMD4-209ENST00000564068 CIPCQ9C0C6 399 aa12.4□□□□□ -0.42
COMMD4-209ENST00000564068 TIGARQ9NQ88 270 aa12.4□□□□□ -0.42
COMMD4-209ENST00000564068 VPS4AQ9UN37 437 aa12.4□□□□□ -0.42
COMMD4-209ENST00000564068 RNF6Q9Y252 685 aa12.4□□□□□ -0.42
COMMD4-209ENST00000564068 PCDHGA10Q9Y5H3 936 aa12.4□□□□□ -0.42
COMMD4-209ENST00000564068 ZNF701M0R085 212 aaPredicted RBP12.39□□□□□ -0.43
COMMD4-209ENST00000564068 FZD9O00144 591 aa12.39□□□□□ -0.43
COMMD4-209ENST00000564068 ACOT8O14734 319 aa12.39□□□□□ -0.43
COMMD4-209ENST00000564068 C9P02748 559 aa12.39□□□□□ -0.43
COMMD4-209ENST00000564068 NR2F6P10588 404 aa12.39□□□□□ -0.43
COMMD4-209ENST00000564068 PRKAR1AP10644 381 aa12.39□□□□□ -0.43
COMMD4-209ENST00000564068 PABPC1P11940 636 aaKnown RBP12.39□□□□□ -0.43
COMMD4-209ENST00000564068 TNNI3P19429 210 aa12.39□□□□□ -0.43
COMMD4-209ENST00000564068 MAGEA6P43360 314 aa12.39□□□□□ -0.43
COMMD4-209ENST00000564068 BNC1Q01954 994 aa12.39□□□□□ -0.43
COMMD4-209ENST00000564068 CREB5Q02930 508 aa12.39□□□□□ -0.43
COMMD4-209ENST00000564068 PTGR1Q14914 329 aa12.39□□□□□ -0.43
COMMD4-209ENST00000564068 TARBP2Q15633 366 aaKnown RBP12.39□□□□□ -0.43
COMMD4-209ENST00000564068 ATAD3BQ5T9A4 648 aa12.39□□□□□ -0.43
COMMD4-209ENST00000564068 FAM171A1Q5VUB5 890 aa12.39□□□□□ -0.43
COMMD4-209ENST00000564068 SDE2Q6IQ49 451 aa12.39□□□□□ -0.43
COMMD4-209ENST00000564068 DUS1LQ6P1R4 473 aaKnown RBP12.39□□□□□ -0.43
COMMD4-209ENST00000564068 OR7D4Q8NG98 312 aa12.39□□□□□ -0.43
COMMD4-209ENST00000564068 BRSK1Q8TDC3 778 aa12.39□□□□□ -0.43
COMMD4-209ENST00000564068 ANKRD49Q8WVL7 239 aa12.39□□□□□ -0.43
COMMD4-209ENST00000564068 ASZ1Q8WWH4 475 aa12.39□□□□□ -0.43
COMMD4-209ENST00000564068 MYOCQ99972 504 aa12.39□□□□□ -0.43
COMMD4-209ENST00000564068 TCF25Q9BQ70 676 aa12.39□□□□□ -0.43
COMMD4-209ENST00000564068 ATG10Q9H0Y0 220 aa12.39□□□□□ -0.43
COMMD4-209ENST00000564068 NKIRAS2Q9NYR9 191 aa12.39□□□□□ -0.43
COMMD4-209ENST00000564068 ZIM2Q9NZV7 527 aa12.39□□□□□ -0.43
COMMD4-209ENST00000564068 TMEM181Q9P2C4 612 aa12.39□□□□□ -0.43
COMMD4-209ENST00000564068 TAF1P21675 1872 aa12.39□□□□□ -0.43
COMMD4-209ENST00000564068 SMIM30A4D0T7 59 aa12.39□□□□□ -0.43
COMMD4-209ENST00000564068 FABP12A6NFH5 140 aa12.39□□□□□ -0.43
COMMD4-209ENST00000564068 USP2O75604 605 aaPredicted RBP12.39□□□□□ -0.43
COMMD4-209ENST00000564068 BEST1O76090 585 aa12.39□□□□□ -0.43
COMMD4-209ENST00000564068 DPP6P42658 865 aa12.39□□□□□ -0.43
COMMD4-209ENST00000564068 FCGRTP55899 365 aa12.39□□□□□ -0.43
COMMD4-209ENST00000564068 PURAQ00577 322 aaKnown RBP12.39□□□□□ -0.43
COMMD4-209ENST00000564068 BLOC1S3Q6QNY0 202 aa12.39□□□□□ -0.43
COMMD4-209ENST00000564068 ASCC1Q8N9N2 400 aaKnown RBP12.39□□□□□ -0.43
COMMD4-209ENST00000564068 MTMR14Q8NCE2 650 aa12.39□□□□□ -0.43
COMMD4-209ENST00000564068 FRS2Q8WU20 508 aa12.39□□□□□ -0.43
COMMD4-209ENST00000564068 CDKN2AIPNLQ96HQ2 116 aa12.39□□□□□ -0.43
COMMD4-209ENST00000564068 IL4I1Q96RQ9 567 aa12.39□□□□□ -0.43
COMMD4-209ENST00000564068 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.39□□□□□ -0.43
COMMD4-209ENST00000564068 ING4Q9UNL4 249 aa12.39□□□□□ -0.43
COMMD4-209ENST00000564068 ANKDD1BA6NHY2 528 aa12.39□□□□□ -0.43
COMMD4-209ENST00000564068 SLC1A7O00341 560 aa12.39□□□□□ -0.43
COMMD4-209ENST00000564068 KERAO60938 352 aa12.39□□□□□ -0.43
COMMD4-209ENST00000564068 ALDH1A1P00352 501 aa12.39□□□□□ -0.43
COMMD4-209ENST00000564068 HSD17B1P14061 328 aa12.39□□□□□ -0.43
COMMD4-209ENST00000564068 SCNN1AP37088 669 aa12.39□□□□□ -0.43
COMMD4-209ENST00000564068 RPS14P62263 151 aaKnown RBP12.39□□□□□ -0.43
COMMD4-209ENST00000564068 BCL2L1Q07817 233 aa12.39□□□□□ -0.43
COMMD4-209ENST00000564068 IL18Q14116 193 aa12.39□□□□□ -0.43
COMMD4-209ENST00000564068 XKR6Q5GH73 641 aa12.39□□□□□ -0.43
COMMD4-209ENST00000564068 CES5AQ6NT32 575 aa12.39□□□□□ -0.43
COMMD4-209ENST00000564068 LYSMD3Q7Z3D4 306 aa12.39□□□□□ -0.43
COMMD4-209ENST00000564068 TMEM203Q969S6 136 aa12.39□□□□□ -0.43
COMMD4-209ENST00000564068 TTYH2Q9BSA4 534 aa12.39□□□□□ -0.43
COMMD4-209ENST00000564068 LSM7Q9UK45 103 aaKnown RBP12.39□□□□□ -0.43
COMMD4-209ENST00000564068 SNX7Q9UNH6 387 aa12.39□□□□□ -0.43
COMMD4-209ENST00000564068 M0QX08 132 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 TRBC1P01850 177 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 GSTM2P28161 218 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 ALDH3B2P48448 385 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 SIRPB2Q5JXA9 342 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 Q96MT0 163 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 TRNT1Q96Q11 434 aaKnown RBP12.38□□□□□ -0.43
COMMD4-209ENST00000564068 MFSD1Q9H3U5 465 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 AGPAT4Q9NRZ5 378 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 LYVE1Q9Y5Y7 322 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 TCRBV5S1A1TA0A578 114 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 ZNF487B1APH4 448 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 GABRDO14764 452 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 ACOX3O15254 700 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 PGRP06401 933 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 C7P10643 843 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 ITGA2P17301 1181 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 RFX3P48380 749 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 PSEN2P49810 448 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 PRKAG1P54619 331 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 SLC36A3Q495N2 470 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 USP39Q53GS9 565 aaKnown RBP12.38□□□□□ -0.43
COMMD4-209ENST00000564068 RNASE12Q5GAN4 147 aaKnown RBP12.38□□□□□ -0.43
COMMD4-209ENST00000564068 PAGE3Q5JUK9 113 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 CES4AQ5XG92 561 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 LINGO4Q6UY18 593 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 MON1AQ86VX9 555 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 DENND1CQ8IV53 801 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 TMEM159Q96B96 161 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 C3orf30Q96M34 536 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 GMLQ99445 158 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms