RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 HNMTP50135 292 aa21.43■■□□□ 1.02
LINC01960-201ENST00000563759 HK2P52789 917 aa21.43■■□□□ 1.02
LINC01960-201ENST00000563759 RPL6Q02878 288 aaKnown RBP21.43■■□□□ 1.02
LINC01960-201ENST00000563759 PCBP2Q15366 365 aaKnown RBP eCLIP21.43■■□□□ 1.02
LINC01960-201ENST00000563759 EEF1AKMT2Q5JPI9 291 aaKnown RBP21.43■■□□□ 1.02
LINC01960-201ENST00000563759 TPRG1LQ5T0D9 272 aa21.43■■□□□ 1.02
LINC01960-201ENST00000563759 METRNLQ641Q3 311 aa21.43■■□□□ 1.02
LINC01960-201ENST00000563759 FOXR1Q6PIV2 292 aa21.43■■□□□ 1.02
LINC01960-201ENST00000563759 ABI3BPQ7Z7G0 1075 aa21.43■■□□□ 1.02
LINC01960-201ENST00000563759 RASGRP3Q8IV61 690 aa21.43■■□□□ 1.02
LINC01960-201ENST00000563759 AFAP1L2Q8N4X5 818 aa21.43■■□□□ 1.02
LINC01960-201ENST00000563759 OR13H1Q8NG92 308 aa21.43■■□□□ 1.02
LINC01960-201ENST00000563759 UBTD2Q8WUN7 234 aa21.43■■□□□ 1.02
LINC01960-201ENST00000563759 EDAQ92838 391 aa21.43■■□□□ 1.02
LINC01960-201ENST00000563759 OR2M4Q96R27 311 aa21.43■■□□□ 1.02
LINC01960-201ENST00000563759 TMEM79Q9BSE2 394 aa21.43■■□□□ 1.02
LINC01960-201ENST00000563759 OR52A5Q9H2C5 316 aa21.43■■□□□ 1.02
LINC01960-201ENST00000563759 MID1IP1Q9NPA3 183 aa21.43■■□□□ 1.02
LINC01960-201ENST00000563759 SPATA6Q9NWH7 488 aaPredicted RBP21.43■■□□□ 1.02
LINC01960-201ENST00000563759 KLQ9UEF7 1012 aa21.43■■□□□ 1.02
LINC01960-201ENST00000563759 PSMD13Q9UNM6 376 aa21.43■■□□□ 1.02
LINC01960-201ENST00000563759 KCNK6Q9Y257 313 aa21.43■■□□□ 1.02
LINC01960-201ENST00000563759 TP53BP1Q12888 1972 aaPredicted RBP21.42■■□□□ 1.02
LINC01960-201ENST00000563759 THADAQ6YHU6 1953 aa21.42■■□□□ 1.02
LINC01960-201ENST00000563759 BDP1A6H8Y1 2624 aa21.42■■□□□ 1.02
LINC01960-201ENST00000563759 TAPBPO15533 448 aa21.42■■□□□ 1.02
LINC01960-201ENST00000563759 CCNT2O60583 730 aaKnown RBP21.42■■□□□ 1.02
LINC01960-201ENST00000563759 DMPKQ09013 629 aa21.42■■□□□ 1.02
LINC01960-201ENST00000563759 RBBP7Q16576 425 aa21.42■■□□□ 1.02
LINC01960-201ENST00000563759 RD3Q7Z3Z2 195 aa21.42■■□□□ 1.02
LINC01960-201ENST00000563759 DEFB119Q8N690 84 aa21.42■■□□□ 1.02
LINC01960-201ENST00000563759 OR1E3Q8WZA6 343 aa21.42■■□□□ 1.02
LINC01960-201ENST00000563759 SCARF2Q96GP6 870 aaPredicted RBP21.42■■□□□ 1.02
LINC01960-201ENST00000563759 UHRF1Q96T88 793 aaPredicted RBP21.42■■□□□ 1.02
LINC01960-201ENST00000563759 PCED1AQ9H1Q7 454 aa21.42■■□□□ 1.02
LINC01960-201ENST00000563759 KCNK13Q9HB14 408 aa21.42■■□□□ 1.02
LINC01960-201ENST00000563759 DLGAP2Q9P1A6 1054 aa21.42■■□□□ 1.02
LINC01960-201ENST00000563759 OPTCQ9UBM4 332 aa21.42■■□□□ 1.02
LINC01960-201ENST00000563759 FIS1Q9Y3D6 152 aa21.42■■□□□ 1.02
LINC01960-201ENST00000563759 MUC3AQ02505 3323 aa21.42■■□□□ 1.02
LINC01960-201ENST00000563759 TDRD6O60522 2096 aaKnown RBP21.42■■□□□ 1.02
LINC01960-201ENST00000563759 KRT87PA6NCN2 255 aa21.41■■□□□ 1.02
LINC01960-201ENST00000563759 UBFD1O14562 309 aaKnown RBP21.41■■□□□ 1.02
LINC01960-201ENST00000563759 GIPC1O14908 333 aa21.41■■□□□ 1.02
LINC01960-201ENST00000563759 SCAMP1O15126 338 aa21.41■■□□□ 1.02
LINC01960-201ENST00000563759 PI15O43692 258 aa21.41■■□□□ 1.02
LINC01960-201ENST00000563759 MLYCDO95822 493 aa21.41■■□□□ 1.02
LINC01960-201ENST00000563759 RPL10P27635 214 aaKnown RBP21.41■■□□□ 1.02
LINC01960-201ENST00000563759 USP39Q53GS9 565 aaKnown RBP21.41■■□□□ 1.02
LINC01960-201ENST00000563759 KIRREL3Q8IZU9 778 aa21.41■■□□□ 1.02
LINC01960-201ENST00000563759 SPDYE1Q8NFV5 336 aaPredicted RBP21.41■■□□□ 1.02
LINC01960-201ENST00000563759 RMDN2Q96LZ7 410 aa21.41■■□□□ 1.02
LINC01960-201ENST00000563759 HGH1Q9BTY7 390 aa21.41■■□□□ 1.02
LINC01960-201ENST00000563759 CD244Q9BZW8 370 aa21.41■■□□□ 1.02
LINC01960-201ENST00000563759 AASDHPPTQ9NRN7 309 aa21.41■■□□□ 1.02
LINC01960-201ENST00000563759 ACSL5Q9ULC5 683 aa21.41■■□□□ 1.02
LINC01960-201ENST00000563759 TMEM233B4DJY2 109 aa21.41■■□□□ 1.02
LINC01960-201ENST00000563759 IFRD1O00458 451 aaPredicted RBP21.41■■□□□ 1.02
LINC01960-201ENST00000563759 ARL1P40616 181 aaPredicted RBP21.41■■□□□ 1.02
LINC01960-201ENST00000563759 GTF2H2Q13888 395 aa21.41■■□□□ 1.02
LINC01960-201ENST00000563759 GTF2H2CQ6P1K8 395 aa21.41■■□□□ 1.02
LINC01960-201ENST00000563759 UNC5DQ6UXZ4 953 aa21.41■■□□□ 1.02
LINC01960-201ENST00000563759 CADM4Q8NFZ8 388 aa21.41■■□□□ 1.02
LINC01960-201ENST00000563759 WWP1Q9H0M0 922 aa21.41■■□□□ 1.02
LINC01960-201ENST00000563759 ASF1AQ9Y294 204 aa21.41■■□□□ 1.02
LINC01960-201ENST00000563759 ANGPTL3Q9Y5C1 460 aa21.41■■□□□ 1.02
LINC01960-201ENST00000563759 METTL12A8MUP2 240 aa21.4■■□□□ 1.02
LINC01960-201ENST00000563759 MEI4A8MW99 385 aa21.4■■□□□ 1.02
LINC01960-201ENST00000563759 SLCO1B7G3V0H7 640 aa21.4■■□□□ 1.02
LINC01960-201ENST00000563759 MATN2O00339 956 aa21.4■■□□□ 1.02
LINC01960-201ENST00000563759 TNFRSF10CO14798 259 aa21.4■■□□□ 1.02
LINC01960-201ENST00000563759 MAP3K13O43283 966 aa21.4■■□□□ 1.02
LINC01960-201ENST00000563759 KCNJ13O60928 360 aa21.4■■□□□ 1.02
LINC01960-201ENST00000563759 STK16O75716 305 aa21.4■■□□□ 1.02
LINC01960-201ENST00000563759 C1orf105O95561 183 aa21.4■■□□□ 1.02
LINC01960-201ENST00000563759 ALOX15P16050 662 aaPredicted RBP21.4■■□□□ 1.02
LINC01960-201ENST00000563759 ACADLP28330 430 aa21.4■■□□□ 1.02
LINC01960-201ENST00000563759 GDF5P43026 501 aa21.4■■□□□ 1.02
LINC01960-201ENST00000563759 CLCNKAP51800 687 aa21.4■■□□□ 1.02
LINC01960-201ENST00000563759 SH3BP2P78314 561 aa21.4■■□□□ 1.02
LINC01960-201ENST00000563759 GOLGA7Q7Z5G4 137 aa21.4■■□□□ 1.02
LINC01960-201ENST00000563759 TEX9Q8N6V9 391 aa21.4■■□□□ 1.02
LINC01960-201ENST00000563759 AGAP11Q8TF27 550 aa21.4■■□□□ 1.02
LINC01960-201ENST00000563759 TSACCQ96A04 125 aaPredicted RBP21.4■■□□□ 1.02
LINC01960-201ENST00000563759 SLC6A18Q96N87 628 aa21.4■■□□□ 1.02
LINC01960-201ENST00000563759 ZBTB26Q9HCK0 441 aa21.4■■□□□ 1.02
LINC01960-201ENST00000563759 VTI1BQ9UEU0 232 aa21.4■■□□□ 1.02
LINC01960-201ENST00000563759 CIDEBQ9UHD4 219 aa21.4■■□□□ 1.02
LINC01960-201ENST00000563759 PPP6CO00743 305 aa21.39■■□□□ 1.02
LINC01960-201ENST00000563759 HGSO14964 777 aaPredicted RBP21.39■■□□□ 1.02
LINC01960-201ENST00000563759 HDAC3O15379 428 aa21.39■■□□□ 1.02
LINC01960-201ENST00000563759 DCXO43602 365 aa21.39■■□□□ 1.02
LINC01960-201ENST00000563759 THEGLP0DJG4 465 aa21.39■■□□□ 1.02
LINC01960-201ENST00000563759 AOC1P19801 751 aa21.39■■□□□ 1.02
LINC01960-201ENST00000563759 PTK2BQ14289 1009 aa21.39■■□□□ 1.02
LINC01960-201ENST00000563759 PDCD2Q16342 344 aaPredicted RBP21.39■■□□□ 1.02
LINC01960-201ENST00000563759 CCSMST1Q4G0I0 132 aa21.39■■□□□ 1.02
LINC01960-201ENST00000563759 METTL2BQ6P1Q9 378 aaKnown RBP21.39■■□□□ 1.02
LINC01960-201ENST00000563759 SLC36A4Q6YBV0 504 aa21.39■■□□□ 1.02
LINC01960-201ENST00000563759 MAVSQ7Z434 540 aa21.39■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms