RNA–Protein interactions for RNA: ENST00000563253.5

NAE1-211, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 3

Gene NAE1, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-211ENST00000563253 AIMP2Q13155 320 aaKnown RBP3.56□□□□□ -1.84
NAE1-211ENST00000563253 IRF3Q14653 427 aa3.56□□□□□ -1.84
NAE1-211ENST00000563253 XKR6Q5GH73 641 aa3.56□□□□□ -1.84
NAE1-211ENST00000563253 TCTE1Q5JU00 501 aa3.56□□□□□ -1.84
NAE1-211ENST00000563253 CCDC30Q5VVM6 783 aa3.56□□□□□ -1.84
NAE1-211ENST00000563253 TRIM65Q6PJ69 517 aa3.56□□□□□ -1.84
NAE1-211ENST00000563253 FAM114A1Q8IWE2 563 aa3.56□□□□□ -1.84
NAE1-211ENST00000563253 LSMEM2Q8N112 164 aa3.56□□□□□ -1.84
NAE1-211ENST00000563253 MAPKAPK5-AS1Q8N8E1 139 aa3.56□□□□□ -1.84
NAE1-211ENST00000563253 OR4C3Q8NH37 302 aa3.56□□□□□ -1.84
NAE1-211ENST00000563253 MPP4Q96JB8 637 aa3.56□□□□□ -1.84
NAE1-211ENST00000563253 MAGED4Q96JG8 741 aa3.56□□□□□ -1.84
NAE1-211ENST00000563253 OSER1Q9NX31 292 aa3.56□□□□□ -1.84
NAE1-211ENST00000563253 TAB2Q9NYJ8 693 aa3.56□□□□□ -1.84
NAE1-211ENST00000563253 LARSQ9P2J5 1176 aaKnown RBP3.56□□□□□ -1.84
NAE1-211ENST00000563253 ZDHHC2Q9UIJ5 367 aa3.56□□□□□ -1.84
NAE1-211ENST00000563253 HACL1Q9UJ83 578 aa3.56□□□□□ -1.84
NAE1-211ENST00000563253 ZNF644Q9H582 1327 aaPredicted RBP3.55□□□□□ -1.84
NAE1-211ENST00000563253 PTGES3LE9PB15 166 aa3.55□□□□□ -1.84
NAE1-211ENST00000563253 E9PQ18 207 aa3.55□□□□□ -1.84
NAE1-211ENST00000563253 CREG1O75629 220 aa3.55□□□□□ -1.84
NAE1-211ENST00000563253 GPIP06744 558 aa3.55□□□□□ -1.84
NAE1-211ENST00000563253 CA6P23280 308 aa3.55□□□□□ -1.84
NAE1-211ENST00000563253 B3GALT5-AS1P59052 145 aa3.55□□□□□ -1.84
NAE1-211ENST00000563253 ARF3P61204 181 aaPredicted RBP3.55□□□□□ -1.84
NAE1-211ENST00000563253 TMF1P82094 1093 aa3.55□□□□□ -1.84
NAE1-211ENST00000563253 ARF1P84077 181 aaKnown RBP3.55□□□□□ -1.84
NAE1-211ENST00000563253 DMPKQ09013 629 aa3.55□□□□□ -1.84
NAE1-211ENST00000563253 DDX10Q13206 875 aaKnown RBP3.55□□□□□ -1.84
NAE1-211ENST00000563253 KRTAP5-1Q6L8H4 278 aa3.55□□□□□ -1.84
NAE1-211ENST00000563253 FAM180BQ6P0A1 224 aa3.55□□□□□ -1.84
NAE1-211ENST00000563253 HAUS6Q7Z4H7 955 aa3.55□□□□□ -1.84
NAE1-211ENST00000563253 RAB42Q8N4Z0 105 aa3.55□□□□□ -1.84
NAE1-211ENST00000563253 BMPERQ8N8U9 685 aa3.55□□□□□ -1.84
NAE1-211ENST00000563253 TRIML1Q8N9V2 468 aa3.55□□□□□ -1.84
NAE1-211ENST00000563253 PAPD5Q8NDF8 572 aaKnown RBP3.55□□□□□ -1.84
NAE1-211ENST00000563253 FAM222BQ8WU58 562 aa3.55□□□□□ -1.84
NAE1-211ENST00000563253 ZNRF4Q8WWF5 429 aa3.55□□□□□ -1.84
NAE1-211ENST00000563253 DYRK2Q92630 601 aa3.55□□□□□ -1.84
NAE1-211ENST00000563253 SAT2Q96F10 170 aaPredicted RBP3.55□□□□□ -1.84
NAE1-211ENST00000563253 AGAP3Q96P47 875 aa3.55□□□□□ -1.84
NAE1-211ENST00000563253 KCNK15Q9H427 330 aa3.55□□□□□ -1.84
NAE1-211ENST00000563253 SMARCAD1Q9H4L7 1026 aa3.55□□□□□ -1.84
NAE1-211ENST00000563253 SDR39U1Q9NRG7 319 aaPredicted RBP3.55□□□□□ -1.84
NAE1-211ENST00000563253 HYKKA2RU49 373 aa3.54□□□□□ -1.84
NAE1-211ENST00000563253 HEPACAM2A8MVW5 462 aa3.54□□□□□ -1.84
NAE1-211ENST00000563253 VPREB1P12018 145 aa3.54□□□□□ -1.84
NAE1-211ENST00000563253 TNFAIP3P21580 790 aa3.54□□□□□ -1.84
NAE1-211ENST00000563253 SLC6A6P31641 620 aa3.54□□□□□ -1.84
NAE1-211ENST00000563253 KRT2P35908 639 aa3.54□□□□□ -1.84
NAE1-211ENST00000563253 PSMB10P40306 273 aa3.54□□□□□ -1.84
NAE1-211ENST00000563253 ARSEP51690 589 aa3.54□□□□□ -1.84
NAE1-211ENST00000563253 PDX1P52945 283 aa3.54□□□□□ -1.84
NAE1-211ENST00000563253 SGSM1Q2NKQ1 1148 aa3.54□□□□□ -1.84
NAE1-211ENST00000563253 TMCO3Q6UWJ1 677 aa3.54□□□□□ -1.84
NAE1-211ENST00000563253 RSRC2Q7L4I2 434 aaKnown RBP3.54□□□□□ -1.84
NAE1-211ENST00000563253 LDB1Q86U70 411 aaPredicted RBP3.54□□□□□ -1.84
NAE1-211ENST00000563253 AACSQ86V21 672 aa3.54□□□□□ -1.84
NAE1-211ENST00000563253 MARVELD2Q8N4S9 558 aa3.54□□□□□ -1.84
NAE1-211ENST00000563253 DCLK2Q8N568 766 aa3.54□□□□□ -1.84
NAE1-211ENST00000563253 C1orf131Q8NDD1 294 aaKnown RBP3.54□□□□□ -1.84
NAE1-211ENST00000563253 OR13J1Q8NGT2 312 aa3.54□□□□□ -1.84
NAE1-211ENST00000563253 OR2AJ1Q8NGZ0 328 aa3.54□□□□□ -1.84
NAE1-211ENST00000563253 MOSPD2Q8NHP6 518 aa3.54□□□□□ -1.84
NAE1-211ENST00000563253 ZFAND2BQ8WV99 257 aa3.54□□□□□ -1.84
NAE1-211ENST00000563253 FNBP1Q96RU3 617 aa3.54□□□□□ -1.84
NAE1-211ENST00000563253 BTBD10Q9BSF8 475 aa3.54□□□□□ -1.84
NAE1-211ENST00000563253 FUCA2Q9BTY2 467 aa3.54□□□□□ -1.84
NAE1-211ENST00000563253 SPATC1LQ9H0A9 340 aa3.54□□□□□ -1.84
NAE1-211ENST00000563253 DPAGT1Q9H3H5 408 aa3.54□□□□□ -1.84
NAE1-211ENST00000563253 ZNF701Q9NV72 531 aaPredicted RBP3.54□□□□□ -1.84
NAE1-211ENST00000563253 SEC63Q9UGP8 760 aaKnown RBP3.54□□□□□ -1.84
NAE1-211ENST00000563253 MTUS1Q9ULD2 1270 aa3.54□□□□□ -1.84
NAE1-211ENST00000563253 PLAGL1Q9UM63 463 aa3.54□□□□□ -1.84
NAE1-211ENST00000563253 MSGN1A6NI15 193 aa3.53□□□□□ -1.84
NAE1-211ENST00000563253 VILLO15195 856 aa3.53□□□□□ -1.84
NAE1-211ENST00000563253 PAPSS1O43252 624 aaPredicted RBP3.53□□□□□ -1.84
NAE1-211ENST00000563253 XRCC3O43542 346 aa3.53□□□□□ -1.84
NAE1-211ENST00000563253 RNASEH1O60930 286 aaKnown RBP3.53□□□□□ -1.84
NAE1-211ENST00000563253 HOXC13P31276 330 aa3.53□□□□□ -1.84
NAE1-211ENST00000563253 SLC15A1P46059 708 aa3.53□□□□□ -1.84
NAE1-211ENST00000563253 SIRPAP78324 504 aa3.53□□□□□ -1.84
NAE1-211ENST00000563253 CDK3Q00526 305 aa3.53□□□□□ -1.84
NAE1-211ENST00000563253 NR1D2Q14995 579 aa3.53□□□□□ -1.84
NAE1-211ENST00000563253 RAB41Q5JT25 222 aa3.53□□□□□ -1.84
NAE1-211ENST00000563253 MAATS1Q7Z4T9 603 aa3.53□□□□□ -1.84
NAE1-211ENST00000563253 OR5AP2Q8NGF4 316 aa3.53□□□□□ -1.84
NAE1-211ENST00000563253 NEK1Q96PY6 1258 aa3.53□□□□□ -1.84
NAE1-211ENST00000563253 PKP2Q99959 881 aa3.53□□□□□ -1.84
NAE1-211ENST00000563253 LMF2Q9BU23 707 aaKnown RBP3.53□□□□□ -1.84
NAE1-211ENST00000563253 FNDC11Q9BVV2 318 aa3.53□□□□□ -1.84
NAE1-211ENST00000563253 CLEC7AQ9BXN2 247 aa3.53□□□□□ -1.84
NAE1-211ENST00000563253 PITPNM3Q9BZ71 974 aa3.53□□□□□ -1.84
NAE1-211ENST00000563253 S1PR5Q9H228 398 aa3.53□□□□□ -1.84
NAE1-211ENST00000563253 ZNF69Q9UC07 566 aa3.53□□□□□ -1.84
NAE1-211ENST00000563253 ZNF148Q9UQR1 794 aa3.53□□□□□ -1.84
NAE1-211ENST00000563253 GRIP1Q9Y3R0 1128 aa3.53□□□□□ -1.84
NAE1-211ENST00000563253 COL5A2P05997 1499 aaPredicted RBP3.53□□□□□ -1.84
NAE1-211ENST00000563253 ZNF541Q9H0D2 1346 aa3.52□□□□□ -1.85
NAE1-211ENST00000563253 B4DLN1 442 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms