RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 TBC1D25Q3MII6 688 aa8.31□□□□□ -1.08
UBR1-204ENST00000563239 SYTL3Q4VX76 610 aa8.31□□□□□ -1.08
UBR1-204ENST00000563239 SNAP47Q5SQN1 464 aa8.31□□□□□ -1.08
UBR1-204ENST00000563239 PLEKHS1Q5SXH7 462 aa8.31□□□□□ -1.08
UBR1-204ENST00000563239 CLEC14AQ86T13 490 aa8.31□□□□□ -1.08
UBR1-204ENST00000563239 PLXDC1Q8IUK5 500 aa8.31□□□□□ -1.08
UBR1-204ENST00000563239 ACVR1CQ8NER5 493 aa8.31□□□□□ -1.08
UBR1-204ENST00000563239 OR4E2Q8NGC2 313 aa8.31□□□□□ -1.08
UBR1-204ENST00000563239 OR52E1Q8NGJ3 308 aa8.31□□□□□ -1.08
UBR1-204ENST00000563239 KIF18AQ8NI77 898 aa8.31□□□□□ -1.08
UBR1-204ENST00000563239 FBXO25Q8TCJ0 367 aa8.31□□□□□ -1.08
UBR1-204ENST00000563239 ASZ1Q8WWH4 475 aa8.31□□□□□ -1.08
UBR1-204ENST00000563239 ZCCHC14Q8WYQ9 949 aaKnown RBP8.31□□□□□ -1.08
UBR1-204ENST00000563239 PMEPA1Q969W9 287 aa8.31□□□□□ -1.08
UBR1-204ENST00000563239 TMEM159Q96B96 161 aa8.31□□□□□ -1.08
UBR1-204ENST00000563239 FAM136AQ96C01 138 aa8.31□□□□□ -1.08
UBR1-204ENST00000563239 CERS2Q96G23 380 aa8.31□□□□□ -1.08
UBR1-204ENST00000563239 C9orf72Q96LT7 481 aa8.31□□□□□ -1.08
UBR1-204ENST00000563239 TGM7Q96PF1 710 aa8.31□□□□□ -1.08
UBR1-204ENST00000563239 FAM167BQ9BTA0 163 aa8.31□□□□□ -1.08
UBR1-204ENST00000563239 MENTQ9BUN1 341 aa8.31□□□□□ -1.08
UBR1-204ENST00000563239 TUBB2BQ9BVA1 445 aa8.31□□□□□ -1.08
UBR1-204ENST00000563239 STRADBQ9C0K7 418 aa8.31□□□□□ -1.08
UBR1-204ENST00000563239 RAB17Q9H0T7 212 aa8.31□□□□□ -1.08
UBR1-204ENST00000563239 TFB2MQ9H5Q4 396 aaKnown RBP8.31□□□□□ -1.08
UBR1-204ENST00000563239 SMYD2Q9NRG4 433 aa8.31□□□□□ -1.08
UBR1-204ENST00000563239 ZDHHC18Q9NUE0 388 aa8.31□□□□□ -1.08
UBR1-204ENST00000563239 OCIAD1Q9NX40 245 aa8.31□□□□□ -1.08
UBR1-204ENST00000563239 SEMA5BQ9P283 1151 aa8.31□□□□□ -1.08
UBR1-204ENST00000563239 ZMIZ1Q9ULJ6 1067 aa8.31□□□□□ -1.08
UBR1-204ENST00000563239 ICKQ9UPZ9 632 aa8.31□□□□□ -1.08
UBR1-204ENST00000563239 UTP11Q9Y3A2 253 aaKnown RBP8.31□□□□□ -1.08
UBR1-204ENST00000563239 NFS1Q9Y697 457 aa8.31□□□□□ -1.08
UBR1-204ENST00000563239 COLEC10Q9Y6Z7 277 aa8.31□□□□□ -1.08
UBR1-204ENST00000563239 OR6C74A6NCV1 312 aa8.3□□□□□ -1.08
UBR1-204ENST00000563239 SRRM3A6NNA2 597 aaPredicted RBP8.3□□□□□ -1.08
UBR1-204ENST00000563239 C9orf172C9J069 976 aa8.3□□□□□ -1.08
UBR1-204ENST00000563239 F8W8V4 182 aa8.3□□□□□ -1.08
UBR1-204ENST00000563239 H3BMM5 538 aa8.3□□□□□ -1.08
UBR1-204ENST00000563239 NDC80O14777 642 aa8.3□□□□□ -1.08
UBR1-204ENST00000563239 EIF3HO15372 352 aaKnown RBP eCLIP8.3□□□□□ -1.08
UBR1-204ENST00000563239 MATN4O95460 622 aa8.3□□□□□ -1.08
UBR1-204ENST00000563239 APOA4P06727 396 aa8.3□□□□□ -1.08
UBR1-204ENST00000563239 ITGA2BP08514 1039 aa8.3□□□□□ -1.08
UBR1-204ENST00000563239 ANKRD34CP0C6C1 535 aa8.3□□□□□ -1.08
UBR1-204ENST00000563239 NDUFS1P28331 727 aa8.3□□□□□ -1.08
UBR1-204ENST00000563239 ATP5DP30049 168 aa8.3□□□□□ -1.08
UBR1-204ENST00000563239 ABCG1P45844 678 aa8.3□□□□□ -1.08
UBR1-204ENST00000563239 KPNA2P52292 529 aaKnown RBP8.3□□□□□ -1.08
UBR1-204ENST00000563239 GPX6P59796 221 aa8.3□□□□□ -1.08
UBR1-204ENST00000563239 GUCY2DQ02846 1103 aa8.3□□□□□ -1.08
UBR1-204ENST00000563239 CAV1Q03135 178 aa8.3□□□□□ -1.08
UBR1-204ENST00000563239 ABRQ12979 859 aa8.3□□□□□ -1.08
UBR1-204ENST00000563239 CALCOCO2Q13137 446 aa8.3□□□□□ -1.08
UBR1-204ENST00000563239 PLCL1Q15111 1095 aa8.3□□□□□ -1.08
UBR1-204ENST00000563239 CCSMST1Q4G0I0 132 aa8.3□□□□□ -1.08
UBR1-204ENST00000563239 ACSBG2Q5FVE4 666 aa8.3□□□□□ -1.08
UBR1-204ENST00000563239 RBM20Q5T481 1227 aaKnown RBP8.3□□□□□ -1.08
UBR1-204ENST00000563239 C8orf74Q6P047 294 aa8.3□□□□□ -1.08
UBR1-204ENST00000563239 ZNF449Q6P9G9 518 aa8.3□□□□□ -1.08
UBR1-204ENST00000563239 FOXR1Q6PIV2 292 aa8.3□□□□□ -1.08
UBR1-204ENST00000563239 CYHR1Q6ZMK1 362 aa8.3□□□□□ -1.08
UBR1-204ENST00000563239 KIAA0408Q6ZU52 694 aa8.3□□□□□ -1.08
UBR1-204ENST00000563239 OTOAQ7RTW8 1153 aa8.3□□□□□ -1.08
UBR1-204ENST00000563239 PRSS42Q7Z5A4 293 aa8.3□□□□□ -1.08
UBR1-204ENST00000563239 GALNT7Q86SF2 657 aa8.3□□□□□ -1.08
UBR1-204ENST00000563239 RASGRP3Q8IV61 690 aa8.3□□□□□ -1.08
UBR1-204ENST00000563239 TBC1D21Q8IYX1 336 aa8.3□□□□□ -1.08
UBR1-204ENST00000563239 ZBED8Q8IZ13 594 aa8.3□□□□□ -1.08
UBR1-204ENST00000563239 ADGRF3Q8IZF5 1079 aa8.3□□□□□ -1.08
UBR1-204ENST00000563239 LSMEM2Q8N112 164 aa8.3□□□□□ -1.08
UBR1-204ENST00000563239 ZBTB2Q8N680 514 aa8.3□□□□□ -1.08
UBR1-204ENST00000563239 SIDT2Q8NBJ9 832 aaKnown RBP8.3□□□□□ -1.08
UBR1-204ENST00000563239 LRRN4CLQ8ND94 238 aa8.3□□□□□ -1.08
UBR1-204ENST00000563239 AGBL5Q8NDL9 886 aa8.3□□□□□ -1.08
UBR1-204ENST00000563239 OR5K2Q8NHB8 316 aa8.3□□□□□ -1.08
UBR1-204ENST00000563239 SNIP1Q8TAD8 396 aaKnown RBP8.3□□□□□ -1.08
UBR1-204ENST00000563239 FLVCR1-AS1Q8TAF5 88 aa8.3□□□□□ -1.08
UBR1-204ENST00000563239 CALML6Q8TD86 181 aa8.3□□□□□ -1.08
UBR1-204ENST00000563239 KLHL6Q8WZ60 621 aa8.3□□□□□ -1.08
UBR1-204ENST00000563239 PPM1MQ96MI6 270 aa8.3□□□□□ -1.08
UBR1-204ENST00000563239 ZNF578Q96N58 590 aaPredicted RBP8.3□□□□□ -1.08
UBR1-204ENST00000563239 PANX3Q96QZ0 392 aa8.3□□□□□ -1.08
UBR1-204ENST00000563239 CMKLR1Q99788 373 aa8.3□□□□□ -1.08
UBR1-204ENST00000563239 MCMBPQ9BTE3 642 aa8.3□□□□□ -1.08
UBR1-204ENST00000563239 AARSD1Q9BTE6 412 aaKnown RBP8.3□□□□□ -1.08
UBR1-204ENST00000563239 HGH1Q9BTY7 390 aa8.3□□□□□ -1.08
UBR1-204ENST00000563239 TSSK1BQ9BXA7 367 aa8.3□□□□□ -1.08
UBR1-204ENST00000563239 XKR8Q9H6D3 395 aa8.3□□□□□ -1.08
UBR1-204ENST00000563239 SAYSD1Q9NPB0 183 aa8.3□□□□□ -1.08
UBR1-204ENST00000563239 HRASLS2Q9NWW9 162 aa8.3□□□□□ -1.08
UBR1-204ENST00000563239 SIDT1Q9NXL6 827 aaKnown RBP8.3□□□□□ -1.08
UBR1-204ENST00000563239 PISDQ9UG56 409 aa8.3□□□□□ -1.08
UBR1-204ENST00000563239 KLHL3Q9UH77 587 aa8.3□□□□□ -1.08
UBR1-204ENST00000563239 RUVBL2Q9Y230 463 aaKnown RBP8.3□□□□□ -1.08
UBR1-204ENST00000563239 ASF1AQ9Y294 204 aa8.3□□□□□ -1.08
UBR1-204ENST00000563239 VPS9D1Q9Y2B5 631 aa8.3□□□□□ -1.08
UBR1-204ENST00000563239 RAXQ9Y2V3 346 aa8.3□□□□□ -1.08
UBR1-204ENST00000563239 PSAT1Q9Y617 370 aa8.3□□□□□ -1.08
UBR1-204ENST00000563239 ZFYVE26Q68DK2 2539 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms