RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 SMAD6O43541 496 aaKnown RBP1.99□□□□□ -2.09
RTF1-207ENST00000561076 XRCC3O43542 346 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 CHMP2AO43633 222 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 AKAP8O43823 692 aaKnown RBP1.99□□□□□ -2.09
RTF1-207ENST00000561076 PEX1O43933 1283 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 B4GALT2O60909 372 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 ATG13O75143 517 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 SPAG6O75602 509 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 TOM1L1O75674 476 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 SURF6O75683 361 aaKnown RBP1.99□□□□□ -2.09
RTF1-207ENST00000561076 RGS11O94810 467 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 TJP3O95049 919 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 NDUFB4O95168 129 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 YEATS4O95619 227 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 TTLL1O95922 423 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 MOCS2O96007 188 aaPredicted RBP1.99□□□□□ -2.09
RTF1-207ENST00000561076 SERPINA3P01011 423 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 LCKP06239 509 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 PROS1P07225 676 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 ASNSP08243 561 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 MMP3P08254 477 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 IL6RP08887 468 aaPredicted RBP1.99□□□□□ -2.09
RTF1-207ENST00000561076 POLR2MP0CAP2 368 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 STAG3L3P0CL85 134 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 GCFC2P16383 781 aaKnown RBP1.99□□□□□ -2.09
RTF1-207ENST00000561076 LBPP18428 481 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 CD9P21926 228 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 BMP5P22003 454 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 GLDCP23378 1020 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 ACADLP28330 430 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 TNFRSF8P28908 595 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 SHMT1P34896 483 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 RFC4P35249 363 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 IDUAP35475 653 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 MAGEA1P43355 309 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 MMP13P45452 471 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 CEBPDP49716 269 aaPredicted RBP1.99□□□□□ -2.09
RTF1-207ENST00000561076 NR0B1P51843 470 aaKnown RBP1.99□□□□□ -2.09
RTF1-207ENST00000561076 NUDT6P53370 316 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 CACNA2D1P54289 1103 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 AIF1P55008 147 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 GSDMDP57764 484 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 KCNK10P57789 538 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 PTENP60484 403 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 RPS8P62241 208 aaKnown RBP1.99□□□□□ -2.09
RTF1-207ENST00000561076 ADAM8P78325 824 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 DLK1P80370 383 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 CCZ1BP86790 482 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 CCZ1P86791 482 aaPredicted RBP1.99□□□□□ -2.09
RTF1-207ENST00000561076 PDE1BQ01064 536 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 TNFRSF17Q02223 184 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 MBTD1Q05BQ5 628 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 ARHGAP1Q07960 439 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 FOXM1Q08050 763 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 HSPA14Q0VDF9 509 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 PMPCAQ10713 525 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 GRIK2Q13002 908 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 NME3Q13232 169 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 CUL1Q13616 776 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 CUL3Q13618 768 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 DOC2AQ14183 400 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 RBBP5Q15291 538 aaKnown RBP1.99□□□□□ -2.09
RTF1-207ENST00000561076 STXBP2Q15833 593 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 DPYSL2Q16555 572 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 FAM153CQ494X1 144 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 PLK5Q496M5 336 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 FBXO48Q5FWF7 155 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 PCID2Q5JVF3 399 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 C6orf10Q5SRN2 563 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 DCST1Q5T197 706 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 CCNYL2Q5T2Q4 361 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 ARMC12Q5T9G4 340 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 ALS2CLQ60I27 953 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 TPGS2Q68CL5 300 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 PM20D1Q6GTS8 502 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 WBP2NLQ6ICG8 309 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 UGT3A1Q6NUS8 523 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 METTL2BQ6P1Q9 378 aaKnown RBP1.99□□□□□ -2.09
RTF1-207ENST00000561076 LRRC8BQ6P9F7 803 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 CYB5D1Q6P9G0 228 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 PAPD4Q6PIY7 484 aaKnown RBP1.99□□□□□ -2.09
RTF1-207ENST00000561076 FIGLAQ6QHK4 219 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 METAP1DQ6UB28 335 aaPredicted RBP1.99□□□□□ -2.09
RTF1-207ENST00000561076 CES3Q6UWW8 571 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 DLEU7Q6UYE1 221 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 B3GNT6Q6ZMB0 384 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 PQLC2Q6ZP29 291 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 QSOX2Q6ZRP7 698 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 DCDC5Q6ZRR9 648 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 TMEM26Q6ZUK4 368 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 Q6ZWC4 215 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 LINGO2Q7L985 606 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 MAVSQ7Z434 540 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 GDF7Q7Z4P5 450 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 MDGA2Q7Z553 956 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 WDR53Q7Z5U6 358 aaPredicted RBP1.99□□□□□ -2.09
RTF1-207ENST00000561076 NRROSQ86YC3 692 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 PSTKQ8IV42 348 aaKnown RBP1.99□□□□□ -2.09
RTF1-207ENST00000561076 ZDHHC21Q8IVQ6 265 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 AQP12AQ8IXF9 295 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms