RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 IRGCQ6NXR0 463 aa14.84□□□□□ -0.03
SNRPA1-213ENST00000560856 KLHL35Q6PF15 583 aa14.84□□□□□ -0.03
SNRPA1-213ENST00000560856 FAM92BQ6ZTR7 304 aa14.84□□□□□ -0.03
SNRPA1-213ENST00000560856 KCNMB4Q86W47 210 aa14.84□□□□□ -0.03
SNRPA1-213ENST00000560856 CNTN4Q8IWV2 1026 aa14.84□□□□□ -0.03
SNRPA1-213ENST00000560856 TBC1D21Q8IYX1 336 aa14.84□□□□□ -0.03
SNRPA1-213ENST00000560856 ADGRF3Q8IZF5 1079 aa14.84□□□□□ -0.03
SNRPA1-213ENST00000560856 C2CD4AQ8NCU7 369 aaPredicted RBP14.84□□□□□ -0.03
SNRPA1-213ENST00000560856 OR5K2Q8NHB8 316 aa14.84□□□□□ -0.03
SNRPA1-213ENST00000560856 CALML6Q8TD86 181 aa14.84□□□□□ -0.03
SNRPA1-213ENST00000560856 LCN9Q8WX39 176 aa14.84□□□□□ -0.03
SNRPA1-213ENST00000560856 ZDHHC12Q96GR4 267 aa14.84□□□□□ -0.03
SNRPA1-213ENST00000560856 PPM1MQ96MI6 270 aa14.84□□□□□ -0.03
SNRPA1-213ENST00000560856 TAAR9Q96RI9 348 aa14.84□□□□□ -0.03
SNRPA1-213ENST00000560856 TSSK1BQ9BXA7 367 aa14.84□□□□□ -0.03
SNRPA1-213ENST00000560856 ZMYND15Q9H091 742 aa14.84□□□□□ -0.03
SNRPA1-213ENST00000560856 DPH5Q9H2P9 285 aa14.84□□□□□ -0.03
SNRPA1-213ENST00000560856 ZNF768Q9H5H4 540 aaKnown RBP14.84□□□□□ -0.03
SNRPA1-213ENST00000560856 IARS2Q9NSE4 1012 aaKnown RBP14.84□□□□□ -0.03
SNRPA1-213ENST00000560856 ICKQ9UPZ9 632 aa14.84□□□□□ -0.03
SNRPA1-213ENST00000560856 CHMP2BQ9UQN3 213 aa14.84□□□□□ -0.03
SNRPA1-213ENST00000560856 ASF1AQ9Y294 204 aa14.84□□□□□ -0.03
SNRPA1-213ENST00000560856 VPS9D1Q9Y2B5 631 aa14.84□□□□□ -0.03
SNRPA1-213ENST00000560856 IGHV5-51A0A0C4DH38 117 aa14.83□□□□□ -0.04
SNRPA1-213ENST00000560856 H3BMM5 538 aa14.83□□□□□ -0.04
SNRPA1-213ENST00000560856 KPNA5O15131 536 aa14.83□□□□□ -0.04
SNRPA1-213ENST00000560856 PFDN6O15212 129 aa14.83□□□□□ -0.04
SNRPA1-213ENST00000560856 HAUS5O94927 633 aa14.83□□□□□ -0.04
SNRPA1-213ENST00000560856 TUBB4AP04350 444 aa14.83□□□□□ -0.04
SNRPA1-213ENST00000560856 POLR2CP19387 275 aaPredicted RBP14.83□□□□□ -0.04
SNRPA1-213ENST00000560856 ITPKBP27987 946 aa14.83□□□□□ -0.04
SNRPA1-213ENST00000560856 CLCN7P51798 805 aa14.83□□□□□ -0.04
SNRPA1-213ENST00000560856 KPNA2P52292 529 aaKnown RBP14.83□□□□□ -0.04
SNRPA1-213ENST00000560856 TIAL1Q01085 375 aaKnown RBP eCLIP14.83□□□□□ -0.04
SNRPA1-213ENST00000560856 FRG1Q14331 258 aaKnown RBP14.83□□□□□ -0.04
SNRPA1-213ENST00000560856 GRB7Q14451 532 aa14.83□□□□□ -0.04
SNRPA1-213ENST00000560856 WHAMMP3Q1A5X7 153 aa14.83□□□□□ -0.04
SNRPA1-213ENST00000560856 PLEKHS1Q5SXH7 462 aa14.83□□□□□ -0.04
SNRPA1-213ENST00000560856 CACHD1Q5VU97 1274 aa14.83□□□□□ -0.04
SNRPA1-213ENST00000560856 TRMT10BQ6PF06 316 aaKnown RBP14.83□□□□□ -0.04
SNRPA1-213ENST00000560856 CNSTQ6PJW8 725 aa14.83□□□□□ -0.04
SNRPA1-213ENST00000560856 OOSP2Q86WS3 158 aa14.83□□□□□ -0.04
SNRPA1-213ENST00000560856 BBOF1Q8ND07 529 aa14.83□□□□□ -0.04
SNRPA1-213ENST00000560856 ZNF248Q8NDW4 579 aa14.83□□□□□ -0.04
SNRPA1-213ENST00000560856 ART4Q93070 314 aa14.83□□□□□ -0.04
SNRPA1-213ENST00000560856 SLC41A2Q96JW4 573 aa14.83□□□□□ -0.04
SNRPA1-213ENST00000560856 SLC30A3Q99726 388 aa14.83□□□□□ -0.04
SNRPA1-213ENST00000560856 MAP3K3Q99759 626 aa14.83□□□□□ -0.04
SNRPA1-213ENST00000560856 FAM167BQ9BTA0 163 aa14.83□□□□□ -0.04
SNRPA1-213ENST00000560856 MENTQ9BUN1 341 aa14.83□□□□□ -0.04
SNRPA1-213ENST00000560856 SPRY4Q9C004 299 aa14.83□□□□□ -0.04
SNRPA1-213ENST00000560856 SRMSQ9H3Y6 488 aa14.83□□□□□ -0.04
SNRPA1-213ENST00000560856 XKR8Q9H6D3 395 aa14.83□□□□□ -0.04
SNRPA1-213ENST00000560856 FBXO8Q9NRD0 319 aa14.83□□□□□ -0.04
SNRPA1-213ENST00000560856 ZC3H7BQ9UGR2 993 aaKnown RBP14.83□□□□□ -0.04
SNRPA1-213ENST00000560856 B3GALT1Q9Y5Z6 326 aa14.83□□□□□ -0.04
SNRPA1-213ENST00000560856 CFAP47Q6ZTR5 3102 aa14.83□□□□□ -0.04
SNRPA1-213ENST00000560856 BTN3A1O00481 513 aa14.82□□□□□ -0.04
SNRPA1-213ENST00000560856 NELFEP18615 380 aaKnown RBP14.82□□□□□ -0.04
SNRPA1-213ENST00000560856 SEPHS1P49903 392 aa14.82□□□□□ -0.04
SNRPA1-213ENST00000560856 CKAP4Q07065 602 aaKnown RBP14.82□□□□□ -0.04
SNRPA1-213ENST00000560856 ABRQ12979 859 aa14.82□□□□□ -0.04
SNRPA1-213ENST00000560856 PDIA2Q13087 525 aaKnown RBP14.82□□□□□ -0.04
SNRPA1-213ENST00000560856 TMED2Q15363 201 aa14.82□□□□□ -0.04
SNRPA1-213ENST00000560856 KYNUQ16719 465 aa14.82□□□□□ -0.04
SNRPA1-213ENST00000560856 TEDDM1Q5T9Z0 273 aa14.82□□□□□ -0.04
SNRPA1-213ENST00000560856 ZDHHC24Q6UX98 284 aa14.82□□□□□ -0.04
SNRPA1-213ENST00000560856 UNC5DQ6UXZ4 953 aa14.82□□□□□ -0.04
SNRPA1-213ENST00000560856 OTOAQ7RTW8 1153 aa14.82□□□□□ -0.04
SNRPA1-213ENST00000560856 AMIGO1Q86WK6 493 aa14.82□□□□□ -0.04
SNRPA1-213ENST00000560856 FAM129CQ86XR2 697 aa14.82□□□□□ -0.04
SNRPA1-213ENST00000560856 ANKMY2Q8IV38 441 aa14.82□□□□□ -0.04
SNRPA1-213ENST00000560856 SPACA3Q8IXA5 215 aa14.82□□□□□ -0.04
SNRPA1-213ENST00000560856 GIMAP7Q8NHV1 300 aa14.82□□□□□ -0.04
SNRPA1-213ENST00000560856 FLVCR1-AS1Q8TAF5 88 aa14.82□□□□□ -0.04
SNRPA1-213ENST00000560856 UBXN4Q92575 508 aa14.82□□□□□ -0.04
SNRPA1-213ENST00000560856 FAM136AQ96C01 138 aa14.82□□□□□ -0.04
SNRPA1-213ENST00000560856 CERS2Q96G23 380 aa14.82□□□□□ -0.04
SNRPA1-213ENST00000560856 CFAP36Q96G28 342 aa14.82□□□□□ -0.04
SNRPA1-213ENST00000560856 DCBLD2Q96PD2 775 aa14.82□□□□□ -0.04
SNRPA1-213ENST00000560856 CD180Q99467 661 aa14.82□□□□□ -0.04
SNRPA1-213ENST00000560856 DDA1Q9BW61 102 aa14.82□□□□□ -0.04
SNRPA1-213ENST00000560856 TRIT1Q9H3H1 467 aaKnown RBP14.82□□□□□ -0.04
SNRPA1-213ENST00000560856 APMAPQ9HDC9 416 aa14.82□□□□□ -0.04
SNRPA1-213ENST00000560856 SLC39A1Q9NY26 324 aa14.82□□□□□ -0.04
SNRPA1-213ENST00000560856 MOCS1Q9NZB8 636 aa14.82□□□□□ -0.04
SNRPA1-213ENST00000560856 KLHL42Q9P2K6 505 aa14.82□□□□□ -0.04
SNRPA1-213ENST00000560856 SLC17A6Q9P2U8 582 aa14.82□□□□□ -0.04
SNRPA1-213ENST00000560856 POLG2Q9UHN1 485 aa14.82□□□□□ -0.04
SNRPA1-213ENST00000560856 POMT2Q9UKY4 750 aa14.82□□□□□ -0.04
SNRPA1-213ENST00000560856 MRFAP1Q9Y605 127 aa14.82□□□□□ -0.04
SNRPA1-213ENST00000560856 NFS1Q9Y697 457 aa14.82□□□□□ -0.04
SNRPA1-213ENST00000560856 SDK2Q58EX2 2172 aa14.82□□□□□ -0.04
SNRPA1-213ENST00000560856 ZFYVE26Q68DK2 2539 aa14.81□□□□□ -0.04
SNRPA1-213ENST00000560856 TLCD2A6NGC4 264 aa14.81□□□□□ -0.04
SNRPA1-213ENST00000560856 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.81□□□□□ -0.04
SNRPA1-213ENST00000560856 KIF2AO00139 706 aaPredicted RBP14.81□□□□□ -0.04
SNRPA1-213ENST00000560856 NDC80O14777 642 aa14.81□□□□□ -0.04
SNRPA1-213ENST00000560856 RASSF9O75901 435 aa14.81□□□□□ -0.04
SNRPA1-213ENST00000560856 KRT37O76014 449 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms