RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 AMIGO1Q86WK6 493 aa16.5■□□□□ 0.23
LRRC28-210ENST00000558879 TBC1D21Q8IYX1 336 aa16.5■□□□□ 0.23
LRRC28-210ENST00000558879 PPHLN1Q8NEY8 458 aaKnown RBP16.5■□□□□ 0.23
LRRC28-210ENST00000558879 OR4L1Q8NH43 312 aa16.5■□□□□ 0.23
LRRC28-210ENST00000558879 OR5K2Q8NHB8 316 aa16.5■□□□□ 0.23
LRRC28-210ENST00000558879 LKAAEAR1Q8TD35 194 aa16.5■□□□□ 0.23
LRRC28-210ENST00000558879 LRFN5Q96NI6 719 aa16.5■□□□□ 0.23
LRRC28-210ENST00000558879 PADI1Q9ULC6 663 aa16.5■□□□□ 0.23
LRRC28-210ENST00000558879 CDYLQ9Y232 598 aa16.5■□□□□ 0.23
LRRC28-210ENST00000558879 MYO18BQ8IUG5 2567 aa16.5■□□□□ 0.23
LRRC28-210ENST00000558879 MDC1Q14676 2089 aaKnown RBP16.5■□□□□ 0.23
LRRC28-210ENST00000558879 GSAPA4D1B5 854 aa16.49■□□□□ 0.23
LRRC28-210ENST00000558879 SLC9B1P1A6NJY1 282 aa16.49■□□□□ 0.23
LRRC28-210ENST00000558879 BHMG1C9JSJ3 638 aaPredicted RBP16.49■□□□□ 0.23
LRRC28-210ENST00000558879 SLC28A2O43868 658 aa16.49■□□□□ 0.23
LRRC28-210ENST00000558879 SCRG1O75711 98 aa16.49■□□□□ 0.23
LRRC28-210ENST00000558879 FURINP09958 794 aa16.49■□□□□ 0.23
LRRC28-210ENST00000558879 CCNYL3P0C7X3 344 aa16.49■□□□□ 0.23
LRRC28-210ENST00000558879 TPBGLP0DKB5 382 aa16.49■□□□□ 0.23
LRRC28-210ENST00000558879 SHMT2P34897 504 aa16.49■□□□□ 0.23
LRRC28-210ENST00000558879 BASP1P80723 227 aaKnown RBP16.49■□□□□ 0.23
LRRC28-210ENST00000558879 GPS2Q13227 327 aa16.49■□□□□ 0.23
LRRC28-210ENST00000558879 PCID2Q5JVF3 399 aa16.49■□□□□ 0.23
LRRC28-210ENST00000558879 TMTC4Q5T4D3 741 aa16.49■□□□□ 0.23
LRRC28-210ENST00000558879 PCSK5Q92824 1860 aa16.49■□□□□ 0.23
LRRC28-210ENST00000558879 TRAPPC9Q96Q05 1148 aa16.49■□□□□ 0.23
LRRC28-210ENST00000558879 AKIRIN1Q9H9L7 192 aaPredicted RBP16.49■□□□□ 0.23
LRRC28-210ENST00000558879 SYTL2Q9HCH5 934 aa16.49■□□□□ 0.23
LRRC28-210ENST00000558879 KCND1Q9NSA2 647 aa16.49■□□□□ 0.23
LRRC28-210ENST00000558879 ACTR10Q9NZ32 417 aa16.49■□□□□ 0.23
LRRC28-210ENST00000558879 MARCH4Q9P2E8 410 aaPredicted RBP16.49■□□□□ 0.23
LRRC28-210ENST00000558879 PPP2R2CQ9Y2T4 447 aa16.49■□□□□ 0.23
LRRC28-210ENST00000558879 PCDHB3Q9Y5E6 796 aa16.49■□□□□ 0.23
LRRC28-210ENST00000558879 C2orf74A8MZ97 194 aa16.48■□□□□ 0.23
LRRC28-210ENST00000558879 CREG1O75629 220 aa16.48■□□□□ 0.23
LRRC28-210ENST00000558879 NTRK1P04629 796 aa16.48■□□□□ 0.23
LRRC28-210ENST00000558879 TPSB2P20231 275 aa16.48■□□□□ 0.23
LRRC28-210ENST00000558879 CCR7P32248 378 aa16.48■□□□□ 0.23
LRRC28-210ENST00000558879 KCNJ1P48048 391 aa16.48■□□□□ 0.23
LRRC28-210ENST00000558879 NFKB2Q00653 900 aa16.48■□□□□ 0.23
LRRC28-210ENST00000558879 PRKG2Q13237 762 aa16.48■□□□□ 0.23
LRRC28-210ENST00000558879 BRD3Q15059 726 aa16.48■□□□□ 0.23
LRRC28-210ENST00000558879 TPSAB1Q15661 275 aa16.48■□□□□ 0.23
LRRC28-210ENST00000558879 SYTL3Q4VX76 610 aa16.48■□□□□ 0.23
LRRC28-210ENST00000558879 FASTKD1Q53R41 847 aaKnown RBP16.48■□□□□ 0.23
LRRC28-210ENST00000558879 C16orf46Q6P387 395 aa16.48■□□□□ 0.23
LRRC28-210ENST00000558879 SPESP1Q6UW49 350 aa16.48■□□□□ 0.23
LRRC28-210ENST00000558879 NAPRTQ6XQN6 538 aa16.48■□□□□ 0.23
LRRC28-210ENST00000558879 TMEM126BQ8IUX1 230 aa16.48■□□□□ 0.23
LRRC28-210ENST00000558879 SLC22A15Q8IZD6 547 aa16.48■□□□□ 0.23
LRRC28-210ENST00000558879 PRELID2Q8N945 189 aa16.48■□□□□ 0.23
LRRC28-210ENST00000558879 SLC38A9Q8NBW4 561 aa16.48■□□□□ 0.23
LRRC28-210ENST00000558879 OR6P1Q8NGX9 317 aa16.48■□□□□ 0.23
LRRC28-210ENST00000558879 FLVCR1-AS1Q8TAF5 88 aa16.48■□□□□ 0.23
LRRC28-210ENST00000558879 APOBEC4Q8WW27 367 aaKnown RBP16.48■□□□□ 0.23
LRRC28-210ENST00000558879 RUFY1Q96T51 708 aa16.48■□□□□ 0.23
LRRC28-210ENST00000558879 TTC1Q99614 292 aa16.48■□□□□ 0.23
LRRC28-210ENST00000558879 AP1M1Q9BXS5 423 aa16.48■□□□□ 0.23
LRRC28-210ENST00000558879 FAM117AQ9C073 453 aa16.48■□□□□ 0.23
LRRC28-210ENST00000558879 IL22Q9GZX6 179 aa16.48■□□□□ 0.23
LRRC28-210ENST00000558879 ACTL8Q9H568 366 aa16.48■□□□□ 0.23
LRRC28-210ENST00000558879 XKR8Q9H6D3 395 aa16.48■□□□□ 0.23
LRRC28-210ENST00000558879 FANCEQ9HB96 536 aa16.48■□□□□ 0.23
LRRC28-210ENST00000558879 MRM3Q9HC36 420 aaKnown RBP16.48■□□□□ 0.23
LRRC28-210ENST00000558879 CHRAC1Q9NRG0 131 aa16.48■□□□□ 0.23
LRRC28-210ENST00000558879 CATSPERZQ9NTU4 200 aa16.48■□□□□ 0.23
LRRC28-210ENST00000558879 ASF1AQ9Y294 204 aa16.48■□□□□ 0.23
LRRC28-210ENST00000558879 KCNMB2Q9Y691 235 aa16.48■□□□□ 0.23
LRRC28-210ENST00000558879 F8W8V4 182 aa16.47■□□□□ 0.23
LRRC28-210ENST00000558879 SUV39H1O43463 412 aa16.47■□□□□ 0.23
LRRC28-210ENST00000558879 GPC4O75487 556 aa16.47■□□□□ 0.23
LRRC28-210ENST00000558879 PVRP15151 417 aa16.47■□□□□ 0.23
LRRC28-210ENST00000558879 ARNTP27540 789 aa16.47■□□□□ 0.23
LRRC28-210ENST00000558879 CXCR5P32302 372 aa16.47■□□□□ 0.23
LRRC28-210ENST00000558879 RORAP35398 523 aa16.47■□□□□ 0.23
LRRC28-210ENST00000558879 SESN2P58004 480 aaPredicted RBP16.47■□□□□ 0.23
LRRC28-210ENST00000558879 CRADDP78560 199 aa16.47■□□□□ 0.23
LRRC28-210ENST00000558879 CDK16Q00536 496 aa16.47■□□□□ 0.23
LRRC28-210ENST00000558879 DEFB109BQ30KR1 87 aa16.47■□□□□ 0.23
LRRC28-210ENST00000558879 AARS2Q5JTZ9 985 aaKnown RBP16.47■□□□□ 0.23
LRRC28-210ENST00000558879 PRICKLE2Q7Z3G6 844 aa16.47■□□□□ 0.23
LRRC28-210ENST00000558879 VRK3Q8IV63 474 aa16.47■□□□□ 0.23
LRRC28-210ENST00000558879 RASGEF1CQ8N431 466 aa16.47■□□□□ 0.23
LRRC28-210ENST00000558879 OR1L3Q8NH93 324 aa16.47■□□□□ 0.23
LRRC28-210ENST00000558879 MENTQ9BUN1 341 aa16.47■□□□□ 0.23
LRRC28-210ENST00000558879 CARD6Q9BX69 1037 aa16.47■□□□□ 0.23
LRRC28-210ENST00000558879 P2RY12Q9H244 342 aa16.47■□□□□ 0.23
LRRC28-210ENST00000558879 HOMER3Q9NSC5 361 aa16.47■□□□□ 0.23
LRRC28-210ENST00000558879 POLG2Q9UHN1 485 aa16.47■□□□□ 0.23
LRRC28-210ENST00000558879 POLHQ9Y253 713 aa16.47■□□□□ 0.23
LRRC28-210ENST00000558879 HEMK1Q9Y5R4 338 aaPredicted RBP16.47■□□□□ 0.23
LRRC28-210ENST00000558879 SPENQ96T58 3664 aaKnown RBP16.47■□□□□ 0.23
LRRC28-210ENST00000558879 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.46■□□□□ 0.23
LRRC28-210ENST00000558879 PIPSLA2A3N6 862 aa16.46■□□□□ 0.23
LRRC28-210ENST00000558879 H3BMH7 237 aa16.46■□□□□ 0.23
LRRC28-210ENST00000558879 AP3B1O00203 1094 aa16.46■□□□□ 0.23
LRRC28-210ENST00000558879 PRMT5O14744 637 aaPredicted RBP16.46■□□□□ 0.23
LRRC28-210ENST00000558879 CEP104O60308 925 aa16.46■□□□□ 0.23
LRRC28-210ENST00000558879 UGT2B7P16662 529 aa16.46■□□□□ 0.23
LRRC28-210ENST00000558879 NMBRP28336 390 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms