RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 FAM227AF5H4B4 570 aa11.41□□□□□ -0.58
SMAD3-206ENST00000558739 AURKAO14965 403 aa11.41□□□□□ -0.58
SMAD3-206ENST00000558739 EPHB6O15197 1021 aa11.41□□□□□ -0.58
SMAD3-206ENST00000558739 MFSD11O43934 449 aa11.41□□□□□ -0.58
SMAD3-206ENST00000558739 PRAMEF2O60811 474 aa11.41□□□□□ -0.58
SMAD3-206ENST00000558739 WDPCPO95876 746 aa11.41□□□□□ -0.58
SMAD3-206ENST00000558739 CRYABP02511 175 aaKnown RBP11.41□□□□□ -0.58
SMAD3-206ENST00000558739 IL1R2P27930 398 aa11.41□□□□□ -0.58
SMAD3-206ENST00000558739 PCSK6P29122 969 aa11.41□□□□□ -0.58
SMAD3-206ENST00000558739 PRKAA1Q13131 559 aa11.41□□□□□ -0.58
SMAD3-206ENST00000558739 BECN1Q14457 450 aa11.41□□□□□ -0.58
SMAD3-206ENST00000558739 NKG7Q16617 165 aa11.41□□□□□ -0.58
SMAD3-206ENST00000558739 MAN2A1Q16706 1144 aa11.41□□□□□ -0.58
SMAD3-206ENST00000558739 DCUN1D2Q6PH85 259 aa11.41□□□□□ -0.58
SMAD3-206ENST00000558739 Q6ZPB1 254 aaPredicted RBP11.41□□□□□ -0.58
SMAD3-206ENST00000558739 SPPL2CQ8IUH8 684 aa11.41□□□□□ -0.58
SMAD3-206ENST00000558739 CHERPQ8IWX8 916 aaKnown RBP11.41□□□□□ -0.58
SMAD3-206ENST00000558739 METTL27Q8N6F8 245 aaPredicted RBP11.41□□□□□ -0.58
SMAD3-206ENST00000558739 NSMCE1Q8WV22 266 aa11.41□□□□□ -0.58
SMAD3-206ENST00000558739 NUDT8Q8WV74 236 aa11.41□□□□□ -0.58
SMAD3-206ENST00000558739 ZFPM2Q8WW38 1151 aa11.41□□□□□ -0.58
SMAD3-206ENST00000558739 NINJ1Q92982 152 aa11.41□□□□□ -0.58
SMAD3-206ENST00000558739 CSPG4P5Q96PW8 444 aa11.41□□□□□ -0.58
SMAD3-206ENST00000558739 DMRTA2Q96SC8 542 aa11.41□□□□□ -0.58
SMAD3-206ENST00000558739 EIF3CQ99613 913 aaKnown RBP11.41□□□□□ -0.58
SMAD3-206ENST00000558739 UCK2Q9BZX2 261 aa11.41□□□□□ -0.58
SMAD3-206ENST00000558739 GANQ9H2C0 597 aa11.41□□□□□ -0.58
SMAD3-206ENST00000558739 NDST4Q9H3R1 872 aa11.41□□□□□ -0.58
SMAD3-206ENST00000558739 XKR8Q9H6D3 395 aa11.41□□□□□ -0.58
SMAD3-206ENST00000558739 TXLNGQ9NUQ3 528 aa11.41□□□□□ -0.58
SMAD3-206ENST00000558739 ADAM21Q9UKJ8 722 aa11.41□□□□□ -0.58
SMAD3-206ENST00000558739 ZNF711Q9Y462 761 aa11.41□□□□□ -0.58
SMAD3-206ENST00000558739 ARID1AO14497 2285 aa11.4□□□□□ -0.58
SMAD3-206ENST00000558739 FGFR1OPO95684 399 aaKnown RBP11.4□□□□□ -0.58
SMAD3-206ENST00000558739 CD86P42081 329 aa11.4□□□□□ -0.58
SMAD3-206ENST00000558739 HCAR3P49019 387 aa11.4□□□□□ -0.58
SMAD3-206ENST00000558739 ST13P50502 369 aaKnown RBP11.4□□□□□ -0.58
SMAD3-206ENST00000558739 RPL26P61254 145 aaKnown RBP11.4□□□□□ -0.58
SMAD3-206ENST00000558739 RBBP7Q16576 425 aa11.4□□□□□ -0.58
SMAD3-206ENST00000558739 METRNLQ641Q3 311 aa11.4□□□□□ -0.58
SMAD3-206ENST00000558739 PDPK2PQ6A1A2 396 aa11.4□□□□□ -0.58
SMAD3-206ENST00000558739 DET1Q7L5Y6 550 aa11.4□□□□□ -0.58
SMAD3-206ENST00000558739 POLNQ7Z5Q5 900 aa11.4□□□□□ -0.58
SMAD3-206ENST00000558739 DAAM2Q86T65 1068 aa11.4□□□□□ -0.58
SMAD3-206ENST00000558739 DMRTC2Q8IXT2 367 aaPredicted RBP11.4□□□□□ -0.58
SMAD3-206ENST00000558739 MARVELD2Q8N4S9 558 aa11.4□□□□□ -0.58
SMAD3-206ENST00000558739 C19orf47Q8N9M1 422 aaKnown RBP11.4□□□□□ -0.58
SMAD3-206ENST00000558739 LCN9Q8WX39 176 aa11.4□□□□□ -0.58
SMAD3-206ENST00000558739 N4BP2L2Q92802 583 aaPredicted RBP11.4□□□□□ -0.58
SMAD3-206ENST00000558739 SRMSQ9H3Y6 488 aa11.4□□□□□ -0.58
SMAD3-206ENST00000558739 SEPT11Q9NVA2 429 aaKnown RBP11.4□□□□□ -0.58
SMAD3-206ENST00000558739 TAS2R14Q9NYV8 317 aa11.4□□□□□ -0.58
SMAD3-206ENST00000558739 PPT2Q9UMR5 302 aa11.4□□□□□ -0.58
SMAD3-206ENST00000558739 RPL26L1Q9UNX3 145 aaKnown RBP11.4□□□□□ -0.58
SMAD3-206ENST00000558739 SPO11Q9Y5K1 396 aa11.4□□□□□ -0.58
SMAD3-206ENST00000558739 AP1M2Q9Y6Q5 423 aa11.4□□□□□ -0.58
SMAD3-206ENST00000558739 MEGF8Q7Z7M0 2845 aa11.4□□□□□ -0.59
SMAD3-206ENST00000558739 H3BRJ5 948 aa11.39□□□□□ -0.59
SMAD3-206ENST00000558739 PROM1O43490 865 aa11.39□□□□□ -0.59
SMAD3-206ENST00000558739 PRPSAP2O60256 369 aa11.39□□□□□ -0.59
SMAD3-206ENST00000558739 ZWINTO95229 277 aa11.39□□□□□ -0.59
SMAD3-206ENST00000558739 INHBBP09529 407 aa11.39□□□□□ -0.59
SMAD3-206ENST00000558739 PRR35P0CG20 571 aa11.39□□□□□ -0.59
SMAD3-206ENST00000558739 PRKCSHP14314 528 aaPredicted RBP11.39□□□□□ -0.59
SMAD3-206ENST00000558739 ALAS2P22557 587 aa11.39□□□□□ -0.59
SMAD3-206ENST00000558739 GCGRP47871 477 aa11.39□□□□□ -0.59
SMAD3-206ENST00000558739 JAM2P57087 298 aa11.39□□□□□ -0.59
SMAD3-206ENST00000558739 MYBPHQ13203 477 aa11.39□□□□□ -0.59
SMAD3-206ENST00000558739 GTF2H3Q13889 308 aa11.39□□□□□ -0.59
SMAD3-206ENST00000558739 VWA3BQ502W6 1294 aa11.39□□□□□ -0.59
SMAD3-206ENST00000558739 FNBP1LQ5T0N5 605 aa11.39□□□□□ -0.59
SMAD3-206ENST00000558739 TXNRD3NBQ6F5E7 133 aa11.39□□□□□ -0.59
SMAD3-206ENST00000558739 HIBCHQ6NVY1 386 aaPredicted RBP11.39□□□□□ -0.59
SMAD3-206ENST00000558739 TMEM220Q6QAJ8 160 aa11.39□□□□□ -0.59
SMAD3-206ENST00000558739 TMC3Q7Z5M5 1100 aa11.39□□□□□ -0.59
SMAD3-206ENST00000558739 DOLPP1Q86YN1 238 aa11.39□□□□□ -0.59
SMAD3-206ENST00000558739 PRSS58Q8IYP2 241 aa11.39□□□□□ -0.59
SMAD3-206ENST00000558739 ANKRD20A12PQ8NF67 263 aa11.39□□□□□ -0.59
SMAD3-206ENST00000558739 MAML1Q92585 1016 aa11.39□□□□□ -0.59
SMAD3-206ENST00000558739 HAS2Q92819 552 aa11.39□□□□□ -0.59
SMAD3-206ENST00000558739 C18orf12Q96KH6 178 aa11.39□□□□□ -0.59
SMAD3-206ENST00000558739 GPR137Q96N19 417 aa11.39□□□□□ -0.59
SMAD3-206ENST00000558739 VPS35Q96QK1 796 aa11.39□□□□□ -0.59
SMAD3-206ENST00000558739 ALPK1Q96QP1 1244 aa11.39□□□□□ -0.59
SMAD3-206ENST00000558739 TRIB3Q96RU7 358 aa11.39□□□□□ -0.59
SMAD3-206ENST00000558739 HES7Q9BYE0 225 aa11.39□□□□□ -0.59
SMAD3-206ENST00000558739 ZWILCHQ9H900 591 aa11.39□□□□□ -0.59
SMAD3-206ENST00000558739 RBM22Q9NW64 420 aaKnown RBP eCLIP11.39□□□□□ -0.59
SMAD3-206ENST00000558739 IRAK4Q9NWZ3 460 aa11.39□□□□□ -0.59
SMAD3-206ENST00000558739 DNAJB12Q9NXW2 375 aaKnown RBP11.39□□□□□ -0.59
SMAD3-206ENST00000558739 RWDD2AQ9UIY3 292 aa11.39□□□□□ -0.59
SMAD3-206ENST00000558739 ZNF407Q9C0G0 2248 aa11.39□□□□□ -0.59
SMAD3-206ENST00000558739 UGT1A9O60656 530 aa11.38□□□□□ -0.59
SMAD3-206ENST00000558739 PRAMEF1O95521 474 aa11.38□□□□□ -0.59
SMAD3-206ENST00000558739 HPP00738 406 aa11.38□□□□□ -0.59
SMAD3-206ENST00000558739 HEXAP06865 529 aa11.38□□□□□ -0.59
SMAD3-206ENST00000558739 UGT1A6P19224 532 aa11.38□□□□□ -0.59
SMAD3-206ENST00000558739 UGT1A1P22309 533 aa11.38□□□□□ -0.59
SMAD3-206ENST00000558739 MSX1P28360 303 aa11.38□□□□□ -0.59
SMAD3-206ENST00000558739 ADSLP30566 484 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms