RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 NOMO1Q15155 1222 aa17.21■□□□□ 0.35
TSPAN3-204ENST00000558394 STX1AQ16623 288 aa17.21■□□□□ 0.35
TSPAN3-204ENST00000558394 NKAIN1Q4KMZ8 207 aa17.21■□□□□ 0.35
TSPAN3-204ENST00000558394 BCL7AQ4VC05 210 aa17.21■□□□□ 0.35
TSPAN3-204ENST00000558394 TEX44Q53QW1 395 aa17.21■□□□□ 0.35
TSPAN3-204ENST00000558394 SIRPB2Q5JXA9 342 aa17.21■□□□□ 0.35
TSPAN3-204ENST00000558394 TLDC1Q6P9B6 456 aa17.21■□□□□ 0.35
TSPAN3-204ENST00000558394 IGFL2Q6UWQ7 119 aa17.21■□□□□ 0.35
TSPAN3-204ENST00000558394 DAAM2Q86T65 1068 aa17.21■□□□□ 0.35
TSPAN3-204ENST00000558394 AMIGO1Q86WK6 493 aa17.21■□□□□ 0.35
TSPAN3-204ENST00000558394 PLD5Q8N7P1 536 aa17.21■□□□□ 0.35
TSPAN3-204ENST00000558394 HM13Q8TCT9 377 aa17.21■□□□□ 0.35
TSPAN3-204ENST00000558394 RELTQ969Z4 430 aa17.21■□□□□ 0.35
TSPAN3-204ENST00000558394 VPS50Q96JG6 964 aa17.21■□□□□ 0.35
TSPAN3-204ENST00000558394 MAGEB10Q96LZ2 347 aaPredicted RBP17.21■□□□□ 0.35
TSPAN3-204ENST00000558394 SLX1AQ9BQ83 275 aa17.21■□□□□ 0.35
TSPAN3-204ENST00000558394 NDC1Q9BTX1 674 aa17.21■□□□□ 0.35
TSPAN3-204ENST00000558394 SPRTNQ9H040 489 aaPredicted RBP17.21■□□□□ 0.35
TSPAN3-204ENST00000558394 SLC6A20Q9NP91 592 aa17.21■□□□□ 0.35
TSPAN3-204ENST00000558394 RTN4Q9NQC3 1192 aaKnown RBP17.21■□□□□ 0.35
TSPAN3-204ENST00000558394 SETD2Q9BYW2 2564 aaPredicted RBP17.21■□□□□ 0.35
TSPAN3-204ENST00000558394 PDZD2O15018 2839 aa17.2■□□□□ 0.34
TSPAN3-204ENST00000558394 LRRD1A4D1F6 860 aa17.2■□□□□ 0.34
TSPAN3-204ENST00000558394 PROSCO94903 275 aa17.2■□□□□ 0.34
TSPAN3-204ENST00000558394 UMODP07911 640 aa17.2■□□□□ 0.34
TSPAN3-204ENST00000558394 ZFXP17010 805 aaPredicted RBP17.2■□□□□ 0.34
TSPAN3-204ENST00000558394 MMP11P24347 488 aa17.2■□□□□ 0.34
TSPAN3-204ENST00000558394 HTR1EP28566 365 aa17.2■□□□□ 0.34
TSPAN3-204ENST00000558394 WNT3AP56704 352 aa17.2■□□□□ 0.34
TSPAN3-204ENST00000558394 TAS2R40P59535 323 aa17.2■□□□□ 0.34
TSPAN3-204ENST00000558394 PRKD1Q15139 912 aaPredicted RBP17.2■□□□□ 0.34
TSPAN3-204ENST00000558394 DEFB110Q30KQ9 67 aa17.2■□□□□ 0.34
TSPAN3-204ENST00000558394 ODF2Q5BJF6 829 aa17.2■□□□□ 0.34
TSPAN3-204ENST00000558394 MRPL14Q6P1L8 145 aaKnown RBP17.2■□□□□ 0.34
TSPAN3-204ENST00000558394 SPESP1Q6UW49 350 aa17.2■□□□□ 0.34
TSPAN3-204ENST00000558394 BNC2Q6ZN30 1099 aaPredicted RBP17.2■□□□□ 0.34
TSPAN3-204ENST00000558394 ZNF655Q8N720 491 aaPredicted RBP17.2■□□□□ 0.34
TSPAN3-204ENST00000558394 OR52E1Q8NGJ3 308 aa17.2■□□□□ 0.34
TSPAN3-204ENST00000558394 ITLN2Q8WWU7 325 aaPredicted RBP17.2■□□□□ 0.34
TSPAN3-204ENST00000558394 RAPGEF5Q92565 580 aa17.2■□□□□ 0.34
TSPAN3-204ENST00000558394 LINC00615Q96LM1 132 aaPredicted RBP17.2■□□□□ 0.34
TSPAN3-204ENST00000558394 TFB2MQ9H5Q4 396 aaKnown RBP17.2■□□□□ 0.34
TSPAN3-204ENST00000558394 MVB12BQ9H7P6 319 aa17.2■□□□□ 0.34
TSPAN3-204ENST00000558394 CTTNBP2NLQ9P2B4 639 aa17.2■□□□□ 0.34
TSPAN3-204ENST00000558394 LOC285095A0A1B0GVY8 99 aa17.19■□□□□ 0.34
TSPAN3-204ENST00000558394 ALOX12BO75342 701 aa17.19■□□□□ 0.34
TSPAN3-204ENST00000558394 EPOP01588 193 aa17.19■□□□□ 0.34
TSPAN3-204ENST00000558394 FOXL2P58012 376 aa17.19■□□□□ 0.34
TSPAN3-204ENST00000558394 MTFR2Q6P444 385 aa17.19■□□□□ 0.34
TSPAN3-204ENST00000558394 MRGPRGQ86SM5 289 aa17.19■□□□□ 0.34
TSPAN3-204ENST00000558394 CPNE8Q86YQ8 564 aa17.19■□□□□ 0.34
TSPAN3-204ENST00000558394 ZNF808Q8N4W9 903 aaPredicted RBP17.19■□□□□ 0.34
TSPAN3-204ENST00000558394 LILRA3Q8N6C8 439 aaPredicted RBP17.19■□□□□ 0.34
TSPAN3-204ENST00000558394 NAT14Q8WUY8 206 aa17.19■□□□□ 0.34
TSPAN3-204ENST00000558394 TEKT5Q96M29 485 aa17.19■□□□□ 0.34
TSPAN3-204ENST00000558394 LHPPQ9H008 270 aa17.19■□□□□ 0.34
TSPAN3-204ENST00000558394 ASB8Q9H765 288 aa17.19■□□□□ 0.34
TSPAN3-204ENST00000558394 FAM60AQ9NP50 221 aa17.19■□□□□ 0.34
TSPAN3-204ENST00000558394 LCMT1Q9UIC8 334 aa17.19■□□□□ 0.34
TSPAN3-204ENST00000558394 ZFHX3Q15911 3703 aa17.19■□□□□ 0.34
TSPAN3-204ENST00000558394 CCDC168Q8NDH2 2452 aa17.19■□□□□ 0.34
TSPAN3-204ENST00000558394 TRGV8A0A0C4DH27 118 aa17.18■□□□□ 0.34
TSPAN3-204ENST00000558394 CFAP99D6REC4 459 aa17.18■□□□□ 0.34
TSPAN3-204ENST00000558394 CNOT3O75175 753 aaKnown RBP17.18■□□□□ 0.34
TSPAN3-204ENST00000558394 PIM1P11309 404 aaPredicted RBP17.18■□□□□ 0.34
TSPAN3-204ENST00000558394 ALAS2P22557 587 aa17.18■□□□□ 0.34
TSPAN3-204ENST00000558394 CHRNA4P43681 627 aa17.18■□□□□ 0.34
TSPAN3-204ENST00000558394 KCNK10P57789 538 aa17.18■□□□□ 0.34
TSPAN3-204ENST00000558394 RPUSD3Q6P087 351 aaKnown RBP17.18■□□□□ 0.34
TSPAN3-204ENST00000558394 ISLR2Q6UXK2 745 aa17.18■□□□□ 0.34
TSPAN3-204ENST00000558394 GFRALQ6UXV0 394 aa17.18■□□□□ 0.34
TSPAN3-204ENST00000558394 PHC3Q8NDX5 983 aa17.18■□□□□ 0.34
TSPAN3-204ENST00000558394 DENND1AQ8TEH3 1009 aa17.18■□□□□ 0.34
TSPAN3-204ENST00000558394 HGH1Q9BTY7 390 aa17.18■□□□□ 0.34
TSPAN3-204ENST00000558394 HSD3B7Q9H2F3 369 aa17.18■□□□□ 0.34
TSPAN3-204ENST00000558394 XKR8Q9H6D3 395 aa17.18■□□□□ 0.34
TSPAN3-204ENST00000558394 VPS37BQ9H9H4 285 aa17.18■□□□□ 0.34
TSPAN3-204ENST00000558394 MRM3Q9HC36 420 aaKnown RBP17.18■□□□□ 0.34
TSPAN3-204ENST00000558394 CRLS1Q9UJA2 301 aa17.18■□□□□ 0.34
TSPAN3-204ENST00000558394 ITPR3Q14573 2671 aa17.18■□□□□ 0.34
TSPAN3-204ENST00000558394 C17orf113A0A1B0GUU1 675 aa17.17■□□□□ 0.34
TSPAN3-204ENST00000558394 ZNF487B1APH4 448 aa17.17■□□□□ 0.34
TSPAN3-204ENST00000558394 CCL21O00585 134 aa17.17■□□□□ 0.34
TSPAN3-204ENST00000558394 GAPDHSO14556 408 aaPredicted RBP17.17■□□□□ 0.34
TSPAN3-204ENST00000558394 PTPN3P26045 913 aa17.17■□□□□ 0.34
TSPAN3-204ENST00000558394 PRLHRP49683 370 aa17.17■□□□□ 0.34
TSPAN3-204ENST00000558394 ARG2P78540 354 aa17.17■□□□□ 0.34
TSPAN3-204ENST00000558394 PRKG2Q13237 762 aa17.17■□□□□ 0.34
TSPAN3-204ENST00000558394 SLC1A5Q15758 541 aa17.17■□□□□ 0.34
TSPAN3-204ENST00000558394 ZNF630Q2M218 657 aaPredicted RBP17.17■□□□□ 0.34
TSPAN3-204ENST00000558394 KRTAP21-3Q3LHN1 58 aa17.17■□□□□ 0.34
TSPAN3-204ENST00000558394 TUBB8Q3ZCM7 444 aa17.17■□□□□ 0.34
TSPAN3-204ENST00000558394 SLC9A4Q6AI14 798 aa17.17■□□□□ 0.34
TSPAN3-204ENST00000558394 ALKBH5Q6P6C2 394 aaKnown RBP17.17■□□□□ 0.34
TSPAN3-204ENST00000558394 NPNTQ6UXI9 565 aa17.17■□□□□ 0.34
TSPAN3-204ENST00000558394 RPTNQ6XPR3 784 aa17.17■□□□□ 0.34
TSPAN3-204ENST00000558394 LINC00696Q6ZRV3 163 aa17.17■□□□□ 0.34
TSPAN3-204ENST00000558394 BZW1Q7L1Q6 419 aaKnown RBP17.17■□□□□ 0.34
TSPAN3-204ENST00000558394 TRIM73Q86UV7 250 aa17.17■□□□□ 0.34
TSPAN3-204ENST00000558394 RFX6Q8HWS3 928 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms