RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 CRELD1Q96HD1 420 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 LYSMD1Q96S90 227 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 CPNE1Q99829 537 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 CCDC106Q9BWC9 280 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 ADGRE3Q9BY15 652 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 SUDS3Q9H7L9 328 aaPredicted RBP10.12□□□□□ -0.79
TPM1-212ENST00000558347 CARS2Q9HA77 564 aaKnown RBP10.12□□□□□ -0.79
TPM1-212ENST00000558347 GPAMQ9HCL2 828 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 PIH1D1Q9NWS0 290 aaKnown RBP10.12□□□□□ -0.79
TPM1-212ENST00000558347 RIMKLBQ9ULI2 386 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 SUFUQ9UMX1 484 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 ST14Q9Y5Y6 855 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 BPTFQ12830 3046 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 FAM208BQ5VWN6 2430 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 ZCWPW2A0A1B0GU75 182 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 HEATR9A2RTY3 570 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 B4DGG1 531 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 ANKRD66B4E2M5 251 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 NTN3O00634 580 aaPredicted RBP10.12□□□□□ -0.79
TPM1-212ENST00000558347 NVLO15381 856 aaKnown RBP10.12□□□□□ -0.79
TPM1-212ENST00000558347 PLIN3O60664 434 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 H2AFYO75367 372 aaKnown RBP10.12□□□□□ -0.79
TPM1-212ENST00000558347 CIB2O75838 187 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 TEAD1P28347 426 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 GP5P40197 560 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 EIF2S3P41091 472 aaKnown RBP10.12□□□□□ -0.79
TPM1-212ENST00000558347 GNPDA1P46926 289 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 AQP5P55064 265 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 GABREP78334 506 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 KPNB1Q14974 876 aaKnown RBP10.12□□□□□ -0.79
TPM1-212ENST00000558347 RCN1Q15293 331 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 CCDC153Q494R4 210 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 ANKRD20A4Q4UJ75 823 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 KHDC1Q4VXA5 237 aaKnown RBP10.12□□□□□ -0.79
TPM1-212ENST00000558347 FASTKD1Q53R41 847 aaKnown RBP10.12□□□□□ -0.79
TPM1-212ENST00000558347 ACSBG2Q5FVE4 666 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 IRGCQ6NXR0 463 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 OGFOD3Q6PK18 319 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 DOK6Q6PKX4 331 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 RBM44Q6ZP01 1051 aaKnown RBP10.12□□□□□ -0.79
TPM1-212ENST00000558347 KDELC2Q7Z4H8 507 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 TRIM74Q86UV6 250 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 SLC25A41Q8N5S1 370 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 FAM46DQ8NEK8 389 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 PPP1R14CQ8TAE6 165 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 STON2Q8WXE9 905 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 AP2M1Q96CW1 435 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 ATXN7L3BQ96GX2 97 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 MECRQ9BV79 373 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 SYNDIG1Q9H7V2 258 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 SLC17A4Q9Y2C5 497 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 ENTPD2Q9Y5L3 495 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 RPS6KL1Q9Y6S9 549 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 ARHGEF17Q96PE2 2063 aaPredicted RBP10.11□□□□□ -0.79
TPM1-212ENST00000558347 C1orf232A0A0U1RR37 186 aa10.11□□□□□ -0.79
TPM1-212ENST00000558347 A0A1W2PQM1 296 aa10.11□□□□□ -0.79
TPM1-212ENST00000558347 PMS2P1A4D2B8 440 aa10.11□□□□□ -0.79
TPM1-212ENST00000558347 A6NHS1 94 aa10.11□□□□□ -0.79
TPM1-212ENST00000558347 B2RBV5 119 aa10.11□□□□□ -0.79
TPM1-212ENST00000558347 PROCP04070 461 aa10.11□□□□□ -0.79
TPM1-212ENST00000558347 ALDOAP04075 364 aaKnown RBP10.11□□□□□ -0.79
TPM1-212ENST00000558347 FGF3P11487 239 aaPredicted RBP10.11□□□□□ -0.79
TPM1-212ENST00000558347 PSMA3P25788 255 aa10.11□□□□□ -0.79
TPM1-212ENST00000558347 AK4P27144 223 aaPredicted RBP10.11□□□□□ -0.79
TPM1-212ENST00000558347 ITPKBP27987 946 aa10.11□□□□□ -0.79
TPM1-212ENST00000558347 HADHAP40939 763 aa10.11□□□□□ -0.79
TPM1-212ENST00000558347 CCL7P80098 99 aa10.11□□□□□ -0.79
TPM1-212ENST00000558347 GALNT3Q14435 633 aa10.11□□□□□ -0.79
TPM1-212ENST00000558347 POU6F1Q14863 301 aa10.11□□□□□ -0.79
TPM1-212ENST00000558347 MUM1Q2TAK8 710 aa10.11□□□□□ -0.79
TPM1-212ENST00000558347 TBC1D25Q3MII6 688 aa10.11□□□□□ -0.79
TPM1-212ENST00000558347 C3orf38Q5JPI3 329 aa10.11□□□□□ -0.79
TPM1-212ENST00000558347 TEDDM1Q5T9Z0 273 aa10.11□□□□□ -0.79
TPM1-212ENST00000558347 CES4AQ5XG92 561 aa10.11□□□□□ -0.79
TPM1-212ENST00000558347 ADAMTSL4Q6UY14 1074 aa10.11□□□□□ -0.79
TPM1-212ENST00000558347 ZNF765Q7L2R6 523 aa10.11□□□□□ -0.79
TPM1-212ENST00000558347 NLRP8Q86W28 1048 aa10.11□□□□□ -0.79
TPM1-212ENST00000558347 TREML1Q86YW5 311 aa10.11□□□□□ -0.79
TPM1-212ENST00000558347 SCUBE1Q8IWY4 988 aa10.11□□□□□ -0.79
TPM1-212ENST00000558347 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.11□□□□□ -0.79
TPM1-212ENST00000558347 PPFIBP2Q8ND30 876 aa10.11□□□□□ -0.79
TPM1-212ENST00000558347 SNIP1Q8TAD8 396 aaKnown RBP10.11□□□□□ -0.79
TPM1-212ENST00000558347 PIWIL2Q8TC59 973 aaKnown RBP10.11□□□□□ -0.79
TPM1-212ENST00000558347 BRSK1Q8TDC3 778 aa10.11□□□□□ -0.79
TPM1-212ENST00000558347 GPBAR1Q8TDU6 330 aa10.11□□□□□ -0.79
TPM1-212ENST00000558347 PPP4R1Q8TF05 950 aa10.11□□□□□ -0.79
TPM1-212ENST00000558347 FGF11Q92914 225 aa10.11□□□□□ -0.79
TPM1-212ENST00000558347 PRR11Q96HE9 360 aaPredicted RBP10.11□□□□□ -0.79
TPM1-212ENST00000558347 FCRL3Q96P31 734 aaPredicted RBP10.11□□□□□ -0.79
TPM1-212ENST00000558347 RIOK2Q9BVS4 552 aaKnown RBP10.11□□□□□ -0.79
TPM1-212ENST00000558347 DPEP2Q9H4A9 486 aa10.11□□□□□ -0.79
TPM1-212ENST00000558347 POLR1BQ9H9Y6 1135 aa10.11□□□□□ -0.79
TPM1-212ENST00000558347 CHRAC1Q9NRG0 131 aa10.11□□□□□ -0.79
TPM1-212ENST00000558347 TREX1Q9NSU2 369 aa10.11□□□□□ -0.79
TPM1-212ENST00000558347 SPATS2LQ9NUQ6 558 aaKnown RBP10.11□□□□□ -0.79
TPM1-212ENST00000558347 HACD3Q9P035 362 aa10.11□□□□□ -0.79
TPM1-212ENST00000558347 MID2Q9UJV3 735 aa10.11□□□□□ -0.79
TPM1-212ENST00000558347 EMCNQ9ULC0 261 aa10.11□□□□□ -0.79
TPM1-212ENST00000558347 SATB2Q9UPW6 733 aa10.11□□□□□ -0.79
TPM1-212ENST00000558347 LRCH1Q9Y2L9 728 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms