RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 XPR1Q9UBH6 696 aa12.12□□□□□ -0.47
TPM1-209ENST00000558072 LNPEPQ9UIQ6 1025 aa12.12□□□□□ -0.47
TPM1-209ENST00000558072 ASF1AQ9Y294 204 aa12.12□□□□□ -0.47
TPM1-209ENST00000558072 STK38LQ9Y2H1 464 aa12.12□□□□□ -0.47
TPM1-209ENST00000558072 PRKAB1Q9Y478 270 aa12.12□□□□□ -0.47
TPM1-209ENST00000558072 SPAG17Q6Q759 2223 aa12.11□□□□□ -0.47
TPM1-209ENST00000558072 A0A1B0GVT2 93 aa12.11□□□□□ -0.47
TPM1-209ENST00000558072 PRR19A6NJB7 356 aa12.11□□□□□ -0.47
TPM1-209ENST00000558072 SUPT3HB4E1H0 165 aa12.11□□□□□ -0.47
TPM1-209ENST00000558072 STX16-NPEPL1H3BU86 382 aa12.11□□□□□ -0.47
TPM1-209ENST00000558072 STX16O14662 325 aa12.11□□□□□ -0.47
TPM1-209ENST00000558072 TRIM13O60858 407 aa12.11□□□□□ -0.47
TPM1-209ENST00000558072 SUPT3HO75486 399 aa12.11□□□□□ -0.47
TPM1-209ENST00000558072 BPGMP07738 259 aa12.11□□□□□ -0.47
TPM1-209ENST00000558072 ANXA6P08133 673 aa12.11□□□□□ -0.47
TPM1-209ENST00000558072 DHRS4L1P0CG22 281 aa12.11□□□□□ -0.47
TPM1-209ENST00000558072 F3P13726 295 aa12.11□□□□□ -0.47
TPM1-209ENST00000558072 GFAPP14136 432 aa12.11□□□□□ -0.47
TPM1-209ENST00000558072 CHN1P15882 459 aa12.11□□□□□ -0.47
TPM1-209ENST00000558072 CREB1P16220 341 aa12.11□□□□□ -0.47
TPM1-209ENST00000558072 CCND1P24385 295 aa12.11□□□□□ -0.47
TPM1-209ENST00000558072 ACADLP28330 430 aa12.11□□□□□ -0.47
TPM1-209ENST00000558072 ETV4P43268 484 aa12.11□□□□□ -0.47
TPM1-209ENST00000558072 GLRBP48167 497 aa12.11□□□□□ -0.47
TPM1-209ENST00000558072 SERPINB4P48594 390 aa12.11□□□□□ -0.47
TPM1-209ENST00000558072 PIK3CGP48736 1102 aa12.11□□□□□ -0.47
TPM1-209ENST00000558072 PGGT1BP53609 377 aa12.11□□□□□ -0.47
TPM1-209ENST00000558072 ALDH18A1P54886 795 aaKnown RBP12.11□□□□□ -0.47
TPM1-209ENST00000558072 DNAJB13P59910 316 aa12.11□□□□□ -0.47
TPM1-209ENST00000558072 DLG1Q12959 904 aa12.11□□□□□ -0.47
TPM1-209ENST00000558072 ABRQ12979 859 aa12.11□□□□□ -0.47
TPM1-209ENST00000558072 ARHGAP19Q14CB8 494 aa12.11□□□□□ -0.47
TPM1-209ENST00000558072 TGFBIQ15582 683 aa12.11□□□□□ -0.47
TPM1-209ENST00000558072 TSNQ15631 228 aaKnown RBP12.11□□□□□ -0.47
TPM1-209ENST00000558072 PRRT3Q5FWE3 981 aa12.11□□□□□ -0.47
TPM1-209ENST00000558072 LIPMQ5VYY2 423 aa12.11□□□□□ -0.47
TPM1-209ENST00000558072 PIWIL4Q7Z3Z4 852 aaKnown RBP12.11□□□□□ -0.47
TPM1-209ENST00000558072 SLC9B2Q86UD5 537 aa12.11□□□□□ -0.47
TPM1-209ENST00000558072 SPATS2Q86XZ4 545 aaKnown RBP12.11□□□□□ -0.47
TPM1-209ENST00000558072 TRIM48Q8IWZ4 208 aa12.11□□□□□ -0.47
TPM1-209ENST00000558072 FBXO39Q8N4B4 442 aa12.11□□□□□ -0.47
TPM1-209ENST00000558072 OR5K2Q8NHB8 316 aa12.11□□□□□ -0.47
TPM1-209ENST00000558072 CXorf40BQ96DE9 158 aa12.11□□□□□ -0.47
TPM1-209ENST00000558072 ATOH8Q96SQ7 321 aa12.11□□□□□ -0.47
TPM1-209ENST00000558072 EGFL8Q99944 293 aa12.11□□□□□ -0.47
TPM1-209ENST00000558072 TRMOQ9BU70 441 aa12.11□□□□□ -0.47
TPM1-209ENST00000558072 DUSP23Q9BVJ7 150 aa12.11□□□□□ -0.47
TPM1-209ENST00000558072 TMEM168Q9H0V1 697 aa12.11□□□□□ -0.47
TPM1-209ENST00000558072 ARRDC1-AS1Q9H2J1 176 aa12.11□□□□□ -0.47
TPM1-209ENST00000558072 TCEAL2Q9H3H9 227 aaPredicted RBP12.11□□□□□ -0.47
TPM1-209ENST00000558072 POT1Q9NUX5 634 aa12.11□□□□□ -0.47
TPM1-209ENST00000558072 ARL15Q9NXU5 204 aa12.11□□□□□ -0.47
TPM1-209ENST00000558072 NCKIPSDQ9NZQ3 722 aa12.11□□□□□ -0.47
TPM1-209ENST00000558072 CD274Q9NZQ7 290 aa12.11□□□□□ -0.47
TPM1-209ENST00000558072 SPATA7Q9P0W8 599 aa12.11□□□□□ -0.47
TPM1-209ENST00000558072 GULP1Q9UBP9 304 aa12.11□□□□□ -0.47
TPM1-209ENST00000558072 FAM8A1Q9UBU6 413 aa12.11□□□□□ -0.47
TPM1-209ENST00000558072 SLC23A2Q9UGH3 650 aa12.11□□□□□ -0.47
TPM1-209ENST00000558072 GMEB2Q9UKD1 530 aa12.11□□□□□ -0.47
TPM1-209ENST00000558072 KCNK6Q9Y257 313 aa12.11□□□□□ -0.47
TPM1-209ENST00000558072 NPEPPSL1A6NEC2 478 aa12.1□□□□□ -0.47
TPM1-209ENST00000558072 LMO7DNF2Z398 122 aa12.1□□□□□ -0.47
TPM1-209ENST00000558072 CDC7O00311 574 aa12.1□□□□□ -0.47
TPM1-209ENST00000558072 KHNYNO15037 678 aaKnown RBP12.1□□□□□ -0.47
TPM1-209ENST00000558072 FFAR2O15552 330 aa12.1□□□□□ -0.47
TPM1-209ENST00000558072 AQP9O43315 295 aa12.1□□□□□ -0.47
TPM1-209ENST00000558072 FUCA1P04066 466 aa12.1□□□□□ -0.47
TPM1-209ENST00000558072 CFIP05156 583 aa12.1□□□□□ -0.47
TPM1-209ENST00000558072 RETP07949 1114 aa12.1□□□□□ -0.47
TPM1-209ENST00000558072 ALDH3A1P30838 453 aa12.1□□□□□ -0.47
TPM1-209ENST00000558072 PREPP48147 710 aa12.1□□□□□ -0.47
TPM1-209ENST00000558072 ATXN3P54252 364 aaPredicted RBP12.1□□□□□ -0.47
TPM1-209ENST00000558072 SUZ12Q15022 739 aaKnown RBP12.1□□□□□ -0.47
TPM1-209ENST00000558072 ZNF423Q2M1K9 1284 aa12.1□□□□□ -0.47
TPM1-209ENST00000558072 INAVAQ3KP66 663 aa12.1□□□□□ -0.47
TPM1-209ENST00000558072 CFAP157Q5JU67 520 aa12.1□□□□□ -0.47
TPM1-209ENST00000558072 CDHR3Q6ZTQ4 885 aa12.1□□□□□ -0.47
TPM1-209ENST00000558072 PDPRQ8NCN5 879 aa12.1□□□□□ -0.47
TPM1-209ENST00000558072 OR6C4Q8NGE1 309 aa12.1□□□□□ -0.47
TPM1-209ENST00000558072 CFAP61Q8NHU2 1237 aa12.1□□□□□ -0.47
TPM1-209ENST00000558072 LRRC8CQ8TDW0 803 aa12.1□□□□□ -0.47
TPM1-209ENST00000558072 LMX1AQ8TE12 382 aa12.1□□□□□ -0.47
TPM1-209ENST00000558072 PTERQ96BW5 349 aa12.1□□□□□ -0.47
TPM1-209ENST00000558072 MAGEB10Q96LZ2 347 aaPredicted RBP12.1□□□□□ -0.47
TPM1-209ENST00000558072 C12orf66Q96MD2 445 aa12.1□□□□□ -0.47
TPM1-209ENST00000558072 CAPS2Q9BXY5 557 aa12.1□□□□□ -0.47
TPM1-209ENST00000558072 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.1□□□□□ -0.47
TPM1-209ENST00000558072 WWP1Q9H0M0 922 aa12.1□□□□□ -0.47
TPM1-209ENST00000558072 EML4Q9HC35 981 aaKnown RBP12.1□□□□□ -0.47
TPM1-209ENST00000558072 OXSMQ9NWU1 459 aa12.1□□□□□ -0.47
TPM1-209ENST00000558072 TAAR2Q9P1P5 351 aa12.1□□□□□ -0.47
TPM1-209ENST00000558072 SLC17A7Q9P2U7 560 aa12.1□□□□□ -0.47
TPM1-209ENST00000558072 PLEKHM1Q9Y4G2 1056 aa12.1□□□□□ -0.47
TPM1-209ENST00000558072 PCDH15Q96QU1 1955 aa12.1□□□□□ -0.47
TPM1-209ENST00000558072 WDFY4Q6ZS81 3184 aa12.1□□□□□ -0.47
TPM1-209ENST00000558072 FOXO6A8MYZ6 492 aa12.09□□□□□ -0.47
TPM1-209ENST00000558072 TMEM114B3SHH9 223 aa12.09□□□□□ -0.47
TPM1-209ENST00000558072 TARM1B6A8C7 271 aa12.09□□□□□ -0.47
TPM1-209ENST00000558072 MYO1CO00159 1063 aa12.09□□□□□ -0.47
TPM1-209ENST00000558072 KLF11O14901 512 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms