RNA–Protein interactions for RNA: ENST00000558013.5

LDLR-207, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDLR, Length 3,144 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-207ENST00000558013 MYCLP1P12525 358 aaPredicted RBP12.63□□□□□ -0.39
LDLR-207ENST00000558013 BPIP17213 487 aa12.63□□□□□ -0.39
LDLR-207ENST00000558013 TACR1P25103 407 aa12.63□□□□□ -0.39
LDLR-207ENST00000558013 DCKP27707 260 aa12.63□□□□□ -0.39
LDLR-207ENST00000558013 HNF1BP35680 557 aa12.63□□□□□ -0.39
LDLR-207ENST00000558013 HLCSP50747 726 aa12.63□□□□□ -0.39
LDLR-207ENST00000558013 NUP107P57740 925 aa12.63□□□□□ -0.39
LDLR-207ENST00000558013 CYP4F3Q08477 520 aa12.63□□□□□ -0.39
LDLR-207ENST00000558013 CRY1Q16526 586 aa12.63□□□□□ -0.39
LDLR-207ENST00000558013 LDLRAP1Q5SW96 308 aa12.63□□□□□ -0.39
LDLR-207ENST00000558013 FAM117BQ6P1L5 589 aa12.63□□□□□ -0.39
LDLR-207ENST00000558013 TBC1D15Q8TC07 691 aa12.63□□□□□ -0.39
LDLR-207ENST00000558013 BARD1Q99728 777 aaKnown RBP12.63□□□□□ -0.39
LDLR-207ENST00000558013 CLSTN3Q9BQT9 956 aa12.63□□□□□ -0.39
LDLR-207ENST00000558013 INPP5KQ9BT40 448 aa12.63□□□□□ -0.39
LDLR-207ENST00000558013 MUC13Q9H3R2 512 aa12.63□□□□□ -0.39
LDLR-207ENST00000558013 ZFYVE1Q9HBF4 777 aa12.63□□□□□ -0.39
LDLR-207ENST00000558013 CHD7Q9P2D1 2997 aa12.63□□□□□ -0.39
LDLR-207ENST00000558013 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.62□□□□□ -0.39
LDLR-207ENST00000558013 PTGES3LE9PB15 166 aa12.62□□□□□ -0.39
LDLR-207ENST00000558013 ULK1O75385 1050 aa12.62□□□□□ -0.39
LDLR-207ENST00000558013 JAK1P23458 1154 aa12.62□□□□□ -0.39
LDLR-207ENST00000558013 TXNDC8Q6A555 127 aa12.62□□□□□ -0.39
LDLR-207ENST00000558013 ZDHHC13Q8IUH4 622 aa12.62□□□□□ -0.39
LDLR-207ENST00000558013 FNDC8Q8TC99 324 aa12.62□□□□□ -0.39
LDLR-207ENST00000558013 NETO1Q8TDF5 533 aa12.62□□□□□ -0.39
LDLR-207ENST00000558013 NCLNQ969V3 563 aa12.62□□□□□ -0.39
LDLR-207ENST00000558013 RHBDF1Q96CC6 855 aa12.62□□□□□ -0.39
LDLR-207ENST00000558013 MYO19Q96H55 970 aa12.62□□□□□ -0.39
LDLR-207ENST00000558013 OR52E6Q96RD3 313 aa12.62□□□□□ -0.39
LDLR-207ENST00000558013 MBOAT4Q96T53 435 aa12.62□□□□□ -0.39
LDLR-207ENST00000558013 KLF16Q9BXK1 252 aaPredicted RBP12.62□□□□□ -0.39
LDLR-207ENST00000558013 DPY30Q9C005 99 aa12.62□□□□□ -0.39
LDLR-207ENST00000558013 TRPM5Q9NZQ8 1165 aa12.62□□□□□ -0.39
LDLR-207ENST00000558013 OPTCQ9UBM4 332 aa12.62□□□□□ -0.39
LDLR-207ENST00000558013 PCDHB14Q9Y5E9 798 aa12.62□□□□□ -0.39
LDLR-207ENST00000558013 XYLBO75191 536 aa12.62□□□□□ -0.39
LDLR-207ENST00000558013 S100BP04271 92 aaPredicted RBP12.62□□□□□ -0.39
LDLR-207ENST00000558013 PFKLP17858 780 aa12.62□□□□□ -0.39
LDLR-207ENST00000558013 CDKN2CP42773 168 aa12.62□□□□□ -0.39
LDLR-207ENST00000558013 SLC14A1Q13336 389 aa12.62□□□□□ -0.39
LDLR-207ENST00000558013 TAF12Q16514 161 aa12.62□□□□□ -0.39
LDLR-207ENST00000558013 LAIR2Q6ISS4 152 aa12.62□□□□□ -0.39
LDLR-207ENST00000558013 DHRS4L2Q6PKH6 230 aa12.62□□□□□ -0.39
LDLR-207ENST00000558013 PARP8Q8N3A8 854 aa12.62□□□□□ -0.39
LDLR-207ENST00000558013 ARL14EPQ8N8R7 260 aaPredicted RBP12.62□□□□□ -0.39
LDLR-207ENST00000558013 TSSK3Q96PN8 268 aa12.62□□□□□ -0.39
LDLR-207ENST00000558013 DGCR6LQ9BY27 220 aa12.62□□□□□ -0.39
LDLR-207ENST00000558013 CD244Q9BZW8 370 aa12.62□□□□□ -0.39
LDLR-207ENST00000558013 FAM118AQ9NWS6 357 aa12.62□□□□□ -0.39
LDLR-207ENST00000558013 COMMD8Q9NX08 183 aa12.62□□□□□ -0.39
LDLR-207ENST00000558013 OR51B4Q9Y5P0 310 aa12.62□□□□□ -0.39
LDLR-207ENST00000558013 CORINQ9Y5Q5 1042 aa12.62□□□□□ -0.39
LDLR-207ENST00000558013 A0A1W2PQ67 120 aa12.62□□□□□ -0.39
LDLR-207ENST00000558013 GNGT2O14610 69 aa12.62□□□□□ -0.39
LDLR-207ENST00000558013 MITFO75030 526 aaPredicted RBP12.62□□□□□ -0.39
LDLR-207ENST00000558013 PGLSO95336 258 aa12.62□□□□□ -0.39
LDLR-207ENST00000558013 MBL2P11226 248 aaPredicted RBP12.62□□□□□ -0.39
LDLR-207ENST00000558013 ZNF7P17097 686 aaPredicted RBP12.62□□□□□ -0.39
LDLR-207ENST00000558013 EPORP19235 508 aa12.62□□□□□ -0.39
LDLR-207ENST00000558013 KCNAB2Q13303 367 aa12.62□□□□□ -0.39
LDLR-207ENST00000558013 SPATS1Q496A3 300 aa12.62□□□□□ -0.39
LDLR-207ENST00000558013 ANKRD26P1Q6NSI1 321 aa12.62□□□□□ -0.39
LDLR-207ENST00000558013 ZNF551Q7Z340 670 aaPredicted RBP12.62□□□□□ -0.39
LDLR-207ENST00000558013 TMEM150AQ86TG1 271 aa12.62□□□□□ -0.39
LDLR-207ENST00000558013 ADAMTS19Q8TE59 1207 aa12.62□□□□□ -0.39
LDLR-207ENST00000558013 FAM162AQ96A26 154 aa12.62□□□□□ -0.39
LDLR-207ENST00000558013 ACDQ96AP0 544 aa12.62□□□□□ -0.39
LDLR-207ENST00000558013 SLC47A1Q96FL8 570 aa12.62□□□□□ -0.39
LDLR-207ENST00000558013 PDLIM5Q96HC4 596 aaKnown RBP12.62□□□□□ -0.39
LDLR-207ENST00000558013 ACTR8Q9H981 624 aa12.62□□□□□ -0.39
LDLR-207ENST00000558013 PFDN4Q9NQP4 134 aa12.62□□□□□ -0.39
LDLR-207ENST00000558013 DNAAF2Q9NVR5 837 aaKnown RBP12.62□□□□□ -0.39
LDLR-207ENST00000558013 TNPO3Q9Y5L0 923 aaKnown RBP12.62□□□□□ -0.39
LDLR-207ENST00000558013 DIRAS1O95057 198 aa12.61□□□□□ -0.39
LDLR-207ENST00000558013 PARNO95453 639 aaKnown RBP12.61□□□□□ -0.39
LDLR-207ENST00000558013 C7P10643 843 aa12.61□□□□□ -0.39
LDLR-207ENST00000558013 BCKDHAP12694 445 aa12.61□□□□□ -0.39
LDLR-207ENST00000558013 EFNA1P20827 205 aaPredicted RBP12.61□□□□□ -0.39
LDLR-207ENST00000558013 CRHBPP24387 322 aa12.61□□□□□ -0.39
LDLR-207ENST00000558013 CDH18Q13634 790 aa12.61□□□□□ -0.39
LDLR-207ENST00000558013 SLC8B1Q6J4K2 584 aa12.61□□□□□ -0.39
LDLR-207ENST00000558013 TPGS1Q6ZTW0 290 aa12.61□□□□□ -0.39
LDLR-207ENST00000558013 DET1Q7L5Y6 550 aa12.61□□□□□ -0.39
LDLR-207ENST00000558013 GALNT5Q7Z7M9 940 aa12.61□□□□□ -0.39
LDLR-207ENST00000558013 OR13F1Q8NGS4 319 aa12.61□□□□□ -0.39
LDLR-207ENST00000558013 MIPOL1Q8TD10 442 aa12.61□□□□□ -0.39
LDLR-207ENST00000558013 ALG14Q96F25 216 aa12.61□□□□□ -0.39
LDLR-207ENST00000558013 FAM126AQ9BYI3 521 aaPredicted RBP12.61□□□□□ -0.39
LDLR-207ENST00000558013 VNN3Q9NY84 501 aa12.61□□□□□ -0.39
LDLR-207ENST00000558013 FAM8A1Q9UBU6 413 aa12.61□□□□□ -0.39
LDLR-207ENST00000558013 CIDEBQ9UHD4 219 aa12.61□□□□□ -0.39
LDLR-207ENST00000558013 DGKBQ9Y6T7 804 aa12.61□□□□□ -0.39
LDLR-207ENST00000558013 H7C4K7 107 aa12.61□□□□□ -0.39
LDLR-207ENST00000558013 CXCR6O00574 342 aa12.61□□□□□ -0.39
LDLR-207ENST00000558013 NRG2O14511 850 aaPredicted RBP12.61□□□□□ -0.39
LDLR-207ENST00000558013 CD9P21926 228 aa12.61□□□□□ -0.39
LDLR-207ENST00000558013 CD47Q08722 323 aa12.61□□□□□ -0.39
LDLR-207ENST00000558013 NFATC3Q12968 1075 aa12.61□□□□□ -0.39
LDLR-207ENST00000558013 BFSP2Q13515 415 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms