RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 FMO4P31512 558 aa3.84□□□□□ -1.79
CHD8-212ENST00000557329 PGM1P36871 562 aa3.84□□□□□ -1.79
CHD8-212ENST00000557329 RPL3P39023 403 aaKnown RBP3.84□□□□□ -1.79
CHD8-212ENST00000557329 GABRB2P47870 512 aa3.84□□□□□ -1.79
CHD8-212ENST00000557329 PPM1FP49593 454 aaPredicted RBP3.84□□□□□ -1.79
CHD8-212ENST00000557329 TMPRSS3P57727 454 aa3.84□□□□□ -1.79
CHD8-212ENST00000557329 SLC18A2Q05940 514 aa3.84□□□□□ -1.79
CHD8-212ENST00000557329 GFPT1Q06210 699 aaPredicted RBP3.84□□□□□ -1.79
CHD8-212ENST00000557329 TRDNQ13061 729 aa3.84□□□□□ -1.79
CHD8-212ENST00000557329 BIRC3Q13489 604 aa3.84□□□□□ -1.79
CHD8-212ENST00000557329 NAA25Q14CX7 972 aa3.84□□□□□ -1.79
CHD8-212ENST00000557329 KARSQ15046 597 aaKnown RBP3.84□□□□□ -1.79
CHD8-212ENST00000557329 TEAD2Q15562 447 aa3.84□□□□□ -1.79
CHD8-212ENST00000557329 ME3Q16798 604 aa3.84□□□□□ -1.79
CHD8-212ENST00000557329 IMMTQ16891 758 aaKnown RBP3.84□□□□□ -1.79
CHD8-212ENST00000557329 KIF19Q2TAC6 998 aa3.84□□□□□ -1.79
CHD8-212ENST00000557329 ZNF284Q2VY69 593 aa3.84□□□□□ -1.79
CHD8-212ENST00000557329 ATG16L1Q676U5 607 aa3.84□□□□□ -1.79
CHD8-212ENST00000557329 RETSATQ6NUM9 610 aa3.84□□□□□ -1.79
CHD8-212ENST00000557329 CCNI2Q6ZMN8 369 aaPredicted RBP3.84□□□□□ -1.79
CHD8-212ENST00000557329 FAM43BQ6ZT52 329 aaPredicted RBP3.84□□□□□ -1.79
CHD8-212ENST00000557329 LPCAT2Q7L5N7 544 aa3.84□□□□□ -1.79
CHD8-212ENST00000557329 RRM2BQ7LG56 351 aa3.84□□□□□ -1.79
CHD8-212ENST00000557329 ADGRG6Q86SQ4 1221 aa3.84□□□□□ -1.79
CHD8-212ENST00000557329 FJX1Q86VR8 437 aa3.84□□□□□ -1.79
CHD8-212ENST00000557329 CHD1LQ86WJ1 897 aa3.84□□□□□ -1.79
CHD8-212ENST00000557329 PLA2G4DQ86XP0 818 aa3.84□□□□□ -1.79
CHD8-212ENST00000557329 ZNF354CQ86Y25 554 aa3.84□□□□□ -1.79
CHD8-212ENST00000557329 MFSD6LQ8IWD5 586 aa3.84□□□□□ -1.79
CHD8-212ENST00000557329 TSTD1Q8NFU3 115 aa3.84□□□□□ -1.79
CHD8-212ENST00000557329 RPLP0P6Q8NHW5 317 aa3.84□□□□□ -1.79
CHD8-212ENST00000557329 CTCFLQ8NI51 663 aaPredicted RBP3.84□□□□□ -1.79
CHD8-212ENST00000557329 RLN3Q8WXF3 142 aa3.84□□□□□ -1.79
CHD8-212ENST00000557329 SMARCD2Q92925 531 aa3.84□□□□□ -1.79
CHD8-212ENST00000557329 USP13Q92995 863 aaPredicted RBP3.84□□□□□ -1.79
CHD8-212ENST00000557329 CPB2Q96IY4 423 aa3.84□□□□□ -1.79
CHD8-212ENST00000557329 CLSTN3Q9BQT9 956 aa3.84□□□□□ -1.79
CHD8-212ENST00000557329 ZNF577Q9BSK1 485 aa3.84□□□□□ -1.79
CHD8-212ENST00000557329 KRT23Q9C075 422 aa3.84□□□□□ -1.79
CHD8-212ENST00000557329 NPFFR1Q9GZQ6 430 aa3.84□□□□□ -1.79
CHD8-212ENST00000557329 UBN1Q9NPG3 1134 aa3.84□□□□□ -1.79
CHD8-212ENST00000557329 ITM2CQ9NQX7 267 aa3.84□□□□□ -1.79
CHD8-212ENST00000557329 BEX4Q9NWD9 120 aaPredicted RBP3.84□□□□□ -1.79
CHD8-212ENST00000557329 MIOSQ9NXC5 875 aa3.84□□□□□ -1.79
CHD8-212ENST00000557329 NLKQ9UBE8 527 aa3.84□□□□□ -1.79
CHD8-212ENST00000557329 FBXW11Q9UKB1 542 aa3.84□□□□□ -1.79
CHD8-212ENST00000557329 SLC13A4Q9UKG4 626 aa3.84□□□□□ -1.79
CHD8-212ENST00000557329 ADAM28Q9UKQ2 775 aa3.84□□□□□ -1.79
CHD8-212ENST00000557329 PCDHGB3Q9Y5G1 929 aa3.84□□□□□ -1.79
CHD8-212ENST00000557329 UBIAD1Q9Y5Z9 338 aa3.84□□□□□ -1.79
CHD8-212ENST00000557329 DMXL2Q8TDJ6 3036 aa3.84□□□□□ -1.79
CHD8-212ENST00000557329 CNTNAP2Q9UHC6 1331 aa3.84□□□□□ -1.79
CHD8-212ENST00000557329 URB1O60287 2271 aaKnown RBP3.83□□□□□ -1.8
CHD8-212ENST00000557329 AKAP13Q12802 2813 aa3.83□□□□□ -1.8
CHD8-212ENST00000557329 FAM90A7PA6NKC0 464 aa3.83□□□□□ -1.8
CHD8-212ENST00000557329 FAM90A22PA8MWA6 464 aa3.83□□□□□ -1.8
CHD8-212ENST00000557329 FAM90A12PA8MX19 464 aa3.83□□□□□ -1.8
CHD8-212ENST00000557329 FAM90A23PA8MXZ1 464 aa3.83□□□□□ -1.8
CHD8-212ENST00000557329 TEX22C9J3V5 150 aa3.83□□□□□ -1.8
CHD8-212ENST00000557329 PRR23D1E9PI22 279 aaPredicted RBP3.83□□□□□ -1.8
CHD8-212ENST00000557329 SLC16A5O15375 505 aa3.83□□□□□ -1.8
CHD8-212ENST00000557329 CEP104O60308 925 aa3.83□□□□□ -1.8
CHD8-212ENST00000557329 APBB3O95704 486 aa3.83□□□□□ -1.8
CHD8-212ENST00000557329 CCNE2O96020 404 aa3.83□□□□□ -1.8
CHD8-212ENST00000557329 EGFP01133 1207 aa3.83□□□□□ -1.8
CHD8-212ENST00000557329 PRR23D2P0DMB1 279 aaPredicted RBP3.83□□□□□ -1.8
CHD8-212ENST00000557329 TFPIP10646 304 aa3.83□□□□□ -1.8
CHD8-212ENST00000557329 PCP11498 1178 aaKnown RBP3.83□□□□□ -1.8
CHD8-212ENST00000557329 SLC2A4P14672 509 aa3.83□□□□□ -1.8
CHD8-212ENST00000557329 DDX5P17844 614 aaKnown RBP3.83□□□□□ -1.8
CHD8-212ENST00000557329 NR1H2P55055 460 aa3.83□□□□□ -1.8
CHD8-212ENST00000557329 HDAC4P56524 1084 aa3.83□□□□□ -1.8
CHD8-212ENST00000557329 TUBA1BP68363 451 aa3.83□□□□□ -1.8
CHD8-212ENST00000557329 CCDC173Q0VFZ6 552 aa3.83□□□□□ -1.8
CHD8-212ENST00000557329 ITGB3BPQ13352 177 aaPredicted RBP3.83□□□□□ -1.8
CHD8-212ENST00000557329 DRP2Q13474 957 aa3.83□□□□□ -1.8
CHD8-212ENST00000557329 LY6DQ14210 128 aa3.83□□□□□ -1.8
CHD8-212ENST00000557329 ALX1Q15699 326 aa3.83□□□□□ -1.8
CHD8-212ENST00000557329 ZNF585BQ52M93 769 aa3.83□□□□□ -1.8
CHD8-212ENST00000557329 PPP6R3Q5H9R7 873 aaPredicted RBP3.83□□□□□ -1.8
CHD8-212ENST00000557329 CDR2LQ86X02 465 aaPredicted RBP3.83□□□□□ -1.8
CHD8-212ENST00000557329 RALGPS2Q86X27 583 aaPredicted RBP3.83□□□□□ -1.8
CHD8-212ENST00000557329 TMTC1Q8IUR5 882 aa3.83□□□□□ -1.8
CHD8-212ENST00000557329 SMAP1Q8IYB5 467 aaPredicted RBP3.83□□□□□ -1.8
CHD8-212ENST00000557329 HACE1Q8IYU2 909 aa3.83□□□□□ -1.8
CHD8-212ENST00000557329 MINDY1Q8N5J2 469 aa3.83□□□□□ -1.8
CHD8-212ENST00000557329 RASSF8Q8NHQ8 419 aa3.83□□□□□ -1.8
CHD8-212ENST00000557329 DEPDC1BQ8WUY9 529 aa3.83□□□□□ -1.8
CHD8-212ENST00000557329 RSPH1Q8WYR4 309 aa3.83□□□□□ -1.8
CHD8-212ENST00000557329 MTBPQ96DY7 904 aa3.83□□□□□ -1.8
CHD8-212ENST00000557329 ERLEC1Q96DZ1 483 aa3.83□□□□□ -1.8
CHD8-212ENST00000557329 KRTAP2-2Q9BYT5 123 aa3.83□□□□□ -1.8
CHD8-212ENST00000557329 LHPPQ9H008 270 aa3.83□□□□□ -1.8
CHD8-212ENST00000557329 CXorf56Q9H5V9 222 aa3.83□□□□□ -1.8
CHD8-212ENST00000557329 PPCSQ9HAB8 311 aa3.83□□□□□ -1.8
CHD8-212ENST00000557329 ASAH2Q9NR71 780 aa3.83□□□□□ -1.8
CHD8-212ENST00000557329 TMEM51Q9NW97 253 aa3.83□□□□□ -1.8
CHD8-212ENST00000557329 IL1RAPL1Q9NZN1 696 aa3.83□□□□□ -1.8
CHD8-212ENST00000557329 NDRG3Q9UGV2 375 aa3.83□□□□□ -1.8
CHD8-212ENST00000557329 CARD8Q9Y2G2 431 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms