RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 PLTPP55058 493 aa9.4□□□□□ -0.9
SRP54-210ENST00000556380 EIF3BP55884 814 aaKnown RBP9.4□□□□□ -0.9
SRP54-210ENST00000556380 MPP1Q00013 466 aa9.4□□□□□ -0.9
SRP54-210ENST00000556380 TIAL1Q01085 375 aaKnown RBP eCLIP9.4□□□□□ -0.96e-7■■■■□ 24.2
SRP54-210ENST00000556380 GUCY2DQ02846 1103 aa9.4□□□□□ -0.9
SRP54-210ENST00000556380 PDIA2Q13087 525 aaKnown RBP9.4□□□□□ -0.9
SRP54-210ENST00000556380 CALCOCO2Q13137 446 aa9.4□□□□□ -0.9
SRP54-210ENST00000556380 THOC5Q13769 683 aaKnown RBP9.4□□□□□ -0.9
SRP54-210ENST00000556380 C16orf72Q14CZ0 275 aa9.4□□□□□ -0.9
SRP54-210ENST00000556380 BRD3Q15059 726 aa9.4□□□□□ -0.9
SRP54-210ENST00000556380 PTRHD1Q6GMV3 140 aaKnown RBP9.4□□□□□ -0.9
SRP54-210ENST00000556380 IGF2-ASQ6U949 168 aa9.4□□□□□ -0.9
SRP54-210ENST00000556380 VASH1Q7L8A9 365 aaPredicted RBP9.4□□□□□ -0.9
SRP54-210ENST00000556380 ARHGAP22Q7Z5H3 698 aa9.4□□□□□ -0.9
SRP54-210ENST00000556380 GALNT7Q86SF2 657 aa9.4□□□□□ -0.9
SRP54-210ENST00000556380 KCNMB4Q86W47 210 aa9.4□□□□□ -0.9
SRP54-210ENST00000556380 ANKMY2Q8IV38 441 aa9.4□□□□□ -0.9
SRP54-210ENST00000556380 PHC3Q8NDX5 983 aa9.4□□□□□ -0.9
SRP54-210ENST00000556380 FBXO36Q8NEA4 188 aa9.4□□□□□ -0.9
SRP54-210ENST00000556380 MNS1Q8NEH6 495 aa9.4□□□□□ -0.9
SRP54-210ENST00000556380 FBXO25Q8TCJ0 367 aa9.4□□□□□ -0.9
SRP54-210ENST00000556380 CALML6Q8TD86 181 aa9.4□□□□□ -0.9
SRP54-210ENST00000556380 ASZ1Q8WWH4 475 aa9.4□□□□□ -0.9
SRP54-210ENST00000556380 TFGQ92734 400 aaPredicted RBP9.4□□□□□ -0.9
SRP54-210ENST00000556380 CERS2Q96G23 380 aa9.4□□□□□ -0.9
SRP54-210ENST00000556380 TMEM74Q96NL1 305 aa9.4□□□□□ -0.9
SRP54-210ENST00000556380 CNTNAP3BQ96NU0 1288 aa9.4□□□□□ -0.9
SRP54-210ENST00000556380 CNTNAP3Q9BZ76 1288 aa9.4□□□□□ -0.9
SRP54-210ENST00000556380 FAM117AQ9C073 453 aa9.4□□□□□ -0.9
SRP54-210ENST00000556380 TWSG1Q9GZX9 223 aa9.4□□□□□ -0.9
SRP54-210ENST00000556380 RAB33BQ9H082 229 aa9.4□□□□□ -0.9
SRP54-210ENST00000556380 KIR3DX1Q9H7L2 352 aa9.4□□□□□ -0.9
SRP54-210ENST00000556380 MVB12BQ9H7P6 319 aa9.4□□□□□ -0.9
SRP54-210ENST00000556380 SYNDIG1Q9H7V2 258 aa9.4□□□□□ -0.9
SRP54-210ENST00000556380 POLR1BQ9H9Y6 1135 aa9.4□□□□□ -0.9
SRP54-210ENST00000556380 FBXO6Q9NRD1 293 aaPredicted RBP9.4□□□□□ -0.9
SRP54-210ENST00000556380 IARS2Q9NSE4 1012 aaKnown RBP9.4□□□□□ -0.9
SRP54-210ENST00000556380 ZDHHC18Q9NUE0 388 aa9.4□□□□□ -0.9
SRP54-210ENST00000556380 SEMA5BQ9P283 1151 aa9.4□□□□□ -0.9
SRP54-210ENST00000556380 KLHL42Q9P2K6 505 aa9.4□□□□□ -0.9
SRP54-210ENST00000556380 DMGDHQ9UI17 866 aaKnown RBP9.4□□□□□ -0.9
SRP54-210ENST00000556380 SLC24A2Q9UI40 661 aa9.4□□□□□ -0.9
SRP54-210ENST00000556380 CHMP2BQ9UQN3 213 aa9.4□□□□□ -0.9
SRP54-210ENST00000556380 MAP4K5Q9Y4K4 846 aa9.4□□□□□ -0.9
SRP54-210ENST00000556380 PCDHGA8Q9Y5G5 932 aa9.4□□□□□ -0.9
SRP54-210ENST00000556380 HEBP2Q9Y5Z4 205 aa9.4□□□□□ -0.9
SRP54-210ENST00000556380 COLEC10Q9Y6Z7 277 aa9.4□□□□□ -0.9
SRP54-210ENST00000556380 CHD6Q8TD26 2715 aa9.4□□□□□ -0.91
SRP54-210ENST00000556380 ZFYVE26Q68DK2 2539 aa9.39□□□□□ -0.91
SRP54-210ENST00000556380 MN1Q10571 1320 aaPredicted RBP9.39□□□□□ -0.91
SRP54-210ENST00000556380 CCDC187A0A096LP49 1063 aa9.39□□□□□ -0.91
SRP54-210ENST00000556380 UBA6A0AVT1 1052 aaPredicted RBP9.39□□□□□ -0.91
SRP54-210ENST00000556380 ESYT3A0FGR9 886 aa9.39□□□□□ -0.91
SRP54-210ENST00000556380 CTAGE15A4D2H0 777 aa9.39□□□□□ -0.91
SRP54-210ENST00000556380 PFDN6O15212 129 aa9.39□□□□□ -0.91
SRP54-210ENST00000556380 NIPSNAP2O75323 286 aa9.39□□□□□ -0.91
SRP54-210ENST00000556380 C1QAP02745 245 aa9.39□□□□□ -0.91
SRP54-210ENST00000556380 AHSGP02765 367 aa9.39□□□□□ -0.91
SRP54-210ENST00000556380 CTAGE8P0CG41 777 aa9.39□□□□□ -0.91
SRP54-210ENST00000556380 TPBGLP0DKB5 382 aa9.39□□□□□ -0.91
SRP54-210ENST00000556380 MPSTP25325 297 aa9.39□□□□□ -0.91
SRP54-210ENST00000556380 CAPZBP47756 277 aa9.39□□□□□ -0.91
SRP54-210ENST00000556380 CARSP49589 748 aaKnown RBP9.39□□□□□ -0.91
SRP54-210ENST00000556380 CLCN7P51798 805 aa9.39□□□□□ -0.91
SRP54-210ENST00000556380 CAV1Q03135 178 aa9.39□□□□□ -0.91
SRP54-210ENST00000556380 CYP4F3Q08477 520 aa9.39□□□□□ -0.91
SRP54-210ENST00000556380 HSPA14Q0VDF9 509 aa9.39□□□□□ -0.91
SRP54-210ENST00000556380 TRA2AQ13595 282 aaKnown RBP eCLIP9.39□□□□□ -0.91
SRP54-210ENST00000556380 MAP9Q49MG5 647 aa9.39□□□□□ -0.91
SRP54-210ENST00000556380 PLEKHS1Q5SXH7 462 aa9.39□□□□□ -0.91
SRP54-210ENST00000556380 C8orf74Q6P047 294 aa9.39□□□□□ -0.91
SRP54-210ENST00000556380 ZNF449Q6P9G9 518 aa9.39□□□□□ -0.91
SRP54-210ENST00000556380 CNSTQ6PJW8 725 aa9.39□□□□□ -0.91
SRP54-210ENST00000556380 KIAA0408Q6ZU52 694 aa9.39□□□□□ -0.91
SRP54-210ENST00000556380 CYS1Q717R9 158 aa9.39□□□□□ -0.91
SRP54-210ENST00000556380 CTAGE6Q86UF2 777 aa9.39□□□□□ -0.91
SRP54-210ENST00000556380 CTAGE4Q8IX94 777 aa9.39□□□□□ -0.91
SRP54-210ENST00000556380 OTUD6BQ8N6M0 293 aa9.39□□□□□ -0.91
SRP54-210ENST00000556380 WDR36Q8NI36 951 aaKnown RBP9.39□□□□□ -0.91
SRP54-210ENST00000556380 JPH3Q8WXH2 748 aaPredicted RBP9.39□□□□□ -0.91
SRP54-210ENST00000556380 NCSTNQ92542 709 aa9.39□□□□□ -0.91
SRP54-210ENST00000556380 RSC1A1Q92681 617 aa9.39□□□□□ -0.91
SRP54-210ENST00000556380 TMEM159Q96B96 161 aa9.39□□□□□ -0.91
SRP54-210ENST00000556380 CFAP36Q96G28 342 aa9.39□□□□□ -0.91
SRP54-210ENST00000556380 AHCYL2Q96HN2 611 aaKnown RBP9.39□□□□□ -0.91
SRP54-210ENST00000556380 CCDC74BQ96LY2 380 aa9.39□□□□□ -0.91
SRP54-210ENST00000556380 PANX3Q96QZ0 392 aa9.39□□□□□ -0.91
SRP54-210ENST00000556380 FERD3LQ96RJ6 166 aa9.39□□□□□ -0.91
SRP54-210ENST00000556380 SLC30A3Q99726 388 aa9.39□□□□□ -0.91
SRP54-210ENST00000556380 NRTNQ99748 197 aa9.39□□□□□ -0.91
SRP54-210ENST00000556380 FAM167BQ9BTA0 163 aa9.39□□□□□ -0.91
SRP54-210ENST00000556380 TSSK1BQ9BXA7 367 aa9.39□□□□□ -0.91
SRP54-210ENST00000556380 PHACTR1Q9C0D0 580 aa9.39□□□□□ -0.91
SRP54-210ENST00000556380 TFB2MQ9H5Q4 396 aaKnown RBP9.39□□□□□ -0.91
SRP54-210ENST00000556380 ASCL3Q9NQ33 180 aa9.39□□□□□ -0.91
SRP54-210ENST00000556380 SLC17A6Q9P2U8 582 aa9.39□□□□□ -0.91
SRP54-210ENST00000556380 SATB2Q9UPW6 733 aa9.39□□□□□ -0.91
SRP54-210ENST00000556380 TMEM8BA6NDV4 472 aa9.38□□□□□ -0.91
SRP54-210ENST00000556380 IFRD1O00458 451 aaPredicted RBP9.38□□□□□ -0.91
SRP54-210ENST00000556380 PLD2O14939 933 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms