RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 TRIM48Q8IWZ4 208 aa9□□□□□ -0.97
ACTN1-218ENST00000556343 GPBAR1Q8TDU6 330 aa9□□□□□ -0.97
ACTN1-218ENST00000556343 LMX1AQ8TE12 382 aa9□□□□□ -0.97
ACTN1-218ENST00000556343 ZFPM2Q8WW38 1151 aa9□□□□□ -0.97
ACTN1-218ENST00000556343 CKAP2Q8WWK9 683 aa9□□□□□ -0.97
ACTN1-218ENST00000556343 EXT2Q93063 718 aa9□□□□□ -0.97
ACTN1-218ENST00000556343 PTERQ96BW5 349 aa9□□□□□ -0.97
ACTN1-218ENST00000556343 CXorf40BQ96DE9 158 aa9□□□□□ -0.97
ACTN1-218ENST00000556343 CNDP1Q96KN2 507 aa9□□□□□ -0.97
ACTN1-218ENST00000556343 C12orf66Q96MD2 445 aa9□□□□□ -0.97
ACTN1-218ENST00000556343 ATOH8Q96SQ7 321 aa9□□□□□ -0.97
ACTN1-218ENST00000556343 RAB11FIP5Q9BXF6 653 aa9□□□□□ -0.97
ACTN1-218ENST00000556343 COL25A1Q9BXS0 654 aaPredicted RBP9□□□□□ -0.97
ACTN1-218ENST00000556343 NUSAP1Q9BXS6 441 aaKnown RBP9□□□□□ -0.97
ACTN1-218ENST00000556343 UNKQ9C0B0 810 aaKnown RBP9□□□□□ -0.97
ACTN1-218ENST00000556343 WWP1Q9H0M0 922 aa9□□□□□ -0.97
ACTN1-218ENST00000556343 OR52A5Q9H2C5 316 aa9□□□□□ -0.97
ACTN1-218ENST00000556343 MANSC1Q9H8J5 431 aa9□□□□□ -0.97
ACTN1-218ENST00000556343 MLXIPLQ9NP71 852 aa9□□□□□ -0.97
ACTN1-218ENST00000556343 TM7SF3Q9NS93 570 aa9□□□□□ -0.97
ACTN1-218ENST00000556343 OXSMQ9NWU1 459 aa9□□□□□ -0.97
ACTN1-218ENST00000556343 NCKIPSDQ9NZQ3 722 aa9□□□□□ -0.97
ACTN1-218ENST00000556343 PCOLCE2Q9UKZ9 415 aa9□□□□□ -0.97
ACTN1-218ENST00000556343 EMCNQ9ULC0 261 aa9□□□□□ -0.97
ACTN1-218ENST00000556343 SLC6A14Q9UN76 642 aa9□□□□□ -0.97
ACTN1-218ENST00000556343 STK38LQ9Y2H1 464 aa9□□□□□ -0.97
ACTN1-218ENST00000556343 CSNK1G3Q9Y6M4 447 aa9□□□□□ -0.97
ACTN1-218ENST00000556343 A0A0C4DFX4 3053 aa9□□□□□ -0.97
ACTN1-218ENST00000556343 TMEM114B3SHH9 223 aa8.99□□□□□ -0.97
ACTN1-218ENST00000556343 TARM1B6A8C7 271 aa8.99□□□□□ -0.97
ACTN1-218ENST00000556343 G3V2L1 256 aa8.99□□□□□ -0.97
ACTN1-218ENST00000556343 UBXN8O00124 270 aa8.99□□□□□ -0.97
ACTN1-218ENST00000556343 ZW10O43264 779 aa8.99□□□□□ -0.97
ACTN1-218ENST00000556343 AQP9O43315 295 aa8.99□□□□□ -0.97
ACTN1-218ENST00000556343 DLX3O60479 287 aa8.99□□□□□ -0.97
ACTN1-218ENST00000556343 C1orf105O95561 183 aa8.99□□□□□ -0.97
ACTN1-218ENST00000556343 CER1O95813 267 aa8.99□□□□□ -0.97
ACTN1-218ENST00000556343 GUCA1CO95843 209 aa8.99□□□□□ -0.97
ACTN1-218ENST00000556343 TOP3BO95985 862 aaKnown RBP8.99□□□□□ -0.97
ACTN1-218ENST00000556343 VIPP01282 170 aa8.99□□□□□ -0.97
ACTN1-218ENST00000556343 SERPINE1P05121 402 aa8.99□□□□□ -0.97
ACTN1-218ENST00000556343 ALPPL2P10696 532 aa8.99□□□□□ -0.97
ACTN1-218ENST00000556343 IMPDH1P20839 514 aa8.99□□□□□ -0.97
ACTN1-218ENST00000556343 KCNA4P22459 653 aa8.99□□□□□ -0.97
ACTN1-218ENST00000556343 CCND1P24385 295 aa8.99□□□□□ -0.97
ACTN1-218ENST00000556343 RPL10P27635 214 aaKnown RBP8.99□□□□□ -0.97
ACTN1-218ENST00000556343 ACADLP28330 430 aa8.99□□□□□ -0.97
ACTN1-218ENST00000556343 CTSKP43235 329 aa8.99□□□□□ -0.97
ACTN1-218ENST00000556343 RXRGP48443 463 aa8.99□□□□□ -0.97
ACTN1-218ENST00000556343 PIK3CGP48736 1102 aa8.99□□□□□ -0.97
ACTN1-218ENST00000556343 PDK4Q16654 411 aa8.99□□□□□ -0.97
ACTN1-218ENST00000556343 PFKFB4Q16877 469 aa8.99□□□□□ -0.97
ACTN1-218ENST00000556343 TPRG1LQ5T0D9 272 aa8.99□□□□□ -0.97
ACTN1-218ENST00000556343 ANKS6Q68DC2 871 aa8.99□□□□□ -0.97
ACTN1-218ENST00000556343 FAM83HQ6ZRV2 1179 aaPredicted RBP8.99□□□□□ -0.97
ACTN1-218ENST00000556343 SLC9B2Q86UD5 537 aa8.99□□□□□ -0.97
ACTN1-218ENST00000556343 SPATS2Q86XZ4 545 aaKnown RBP8.99□□□□□ -0.97
ACTN1-218ENST00000556343 VRK3Q8IV63 474 aa8.99□□□□□ -0.97
ACTN1-218ENST00000556343 RBM12BQ8IXT5 1001 aaKnown RBP8.99□□□□□ -0.97
ACTN1-218ENST00000556343 AFAP1L2Q8N4X5 818 aa8.99□□□□□ -0.97
ACTN1-218ENST00000556343 PTGR2Q8N8N7 351 aaPredicted RBP8.99□□□□□ -0.97
ACTN1-218ENST00000556343 FAM46DQ8NEK8 389 aa8.99□□□□□ -0.97
ACTN1-218ENST00000556343 OR9A1PQ8NGU1 263 aa8.99□□□□□ -0.97
ACTN1-218ENST00000556343 OR5K2Q8NHB8 316 aa8.99□□□□□ -0.97
ACTN1-218ENST00000556343 SH3KBP1Q96B97 665 aa8.99□□□□□ -0.97
ACTN1-218ENST00000556343 FBXL8Q96CD0 374 aa8.99□□□□□ -0.97
ACTN1-218ENST00000556343 PHF21BQ96EK2 531 aa8.99□□□□□ -0.97
ACTN1-218ENST00000556343 ELF4Q99607 663 aaPredicted RBP8.99□□□□□ -0.97
ACTN1-218ENST00000556343 TRMOQ9BU70 441 aa8.99□□□□□ -0.97
ACTN1-218ENST00000556343 NSRP1Q9H0G5 558 aaKnown RBP8.99□□□□□ -0.97
ACTN1-218ENST00000556343 PRDM8Q9NQV8 689 aa8.99□□□□□ -0.97
ACTN1-218ENST00000556343 THAP1Q9NVV9 213 aa8.99□□□□□ -0.97
ACTN1-218ENST00000556343 WWOXQ9NZC7 414 aa8.99□□□□□ -0.97
ACTN1-218ENST00000556343 SPATA7Q9P0W8 599 aa8.99□□□□□ -0.97
ACTN1-218ENST00000556343 TAAR2Q9P1P5 351 aa8.99□□□□□ -0.97
ACTN1-218ENST00000556343 PSMD13Q9UNM6 376 aa8.99□□□□□ -0.97
ACTN1-218ENST00000556343 PDE10AQ9Y233 779 aa8.99□□□□□ -0.97
ACTN1-218ENST00000556343 PLEKHM1Q9Y4G2 1056 aa8.99□□□□□ -0.97
ACTN1-218ENST00000556343 ANGPTL3Q9Y5C1 460 aa8.99□□□□□ -0.97
ACTN1-218ENST00000556343 LRRK1Q38SD2 2015 aa8.98□□□□□ -0.97
ACTN1-218ENST00000556343 BPTFQ12830 3046 aa8.98□□□□□ -0.97
ACTN1-218ENST00000556343 NCF1BA6NI72 391 aaPredicted RBP8.98□□□□□ -0.97
ACTN1-218ENST00000556343 A8MT66 165 aa8.98□□□□□ -0.97
ACTN1-218ENST00000556343 NCF1CA8MVU1 366 aaPredicted RBP8.98□□□□□ -0.97
ACTN1-218ENST00000556343 LMO7DNF2Z398 122 aa8.98□□□□□ -0.97
ACTN1-218ENST00000556343 KLF11O14901 512 aa8.98□□□□□ -0.97
ACTN1-218ENST00000556343 KHNYNO15037 678 aaKnown RBP8.98□□□□□ -0.97
ACTN1-218ENST00000556343 KLK8O60259 260 aa8.98□□□□□ -0.97
ACTN1-218ENST00000556343 NPHS1O60500 1241 aa8.98□□□□□ -0.97
ACTN1-218ENST00000556343 KATNA1O75449 491 aa8.98□□□□□ -0.97
ACTN1-218ENST00000556343 STK16O75716 305 aa8.98□□□□□ -0.97
ACTN1-218ENST00000556343 SUPT7LO94864 414 aa8.98□□□□□ -0.97
ACTN1-218ENST00000556343 EPN2O95208 641 aa8.98□□□□□ -0.97
ACTN1-218ENST00000556343 VIMP08670 466 aaKnown RBP8.98□□□□□ -0.97
ACTN1-218ENST00000556343 F3P13726 295 aa8.98□□□□□ -0.97
ACTN1-218ENST00000556343 NCF1P14598 390 aaPredicted RBP8.98□□□□□ -0.97
ACTN1-218ENST00000556343 AK4P27144 223 aaPredicted RBP8.98□□□□□ -0.97
ACTN1-218ENST00000556343 GMPRP36959 345 aa8.98□□□□□ -0.97
ACTN1-218ENST00000556343 ATXN3P54252 364 aaPredicted RBP8.98□□□□□ -0.97
ACTN1-218ENST00000556343 GNGT1P63211 74 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms