RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 CLEC2LP0C7M8 214 aa4.77□□□□□ -1.65
ATXN3-239ENST00000556315 ELFN1P0C7U0 828 aa4.77□□□□□ -1.65
ATXN3-239ENST00000556315 PRF1P14222 555 aa4.77□□□□□ -1.65
ATXN3-239ENST00000556315 NFKBIAP25963 317 aa4.77□□□□□ -1.65
ATXN3-239ENST00000556315 ADRA1BP35368 520 aa4.77□□□□□ -1.65
ATXN3-239ENST00000556315 GARSP41250 739 aaKnown RBP4.77□□□□□ -1.65
ATXN3-239ENST00000556315 ACTR1BP42025 376 aa4.77□□□□□ -1.65
ATXN3-239ENST00000556315 GABRB2P47870 512 aa4.77□□□□□ -1.65
ATXN3-239ENST00000556315 CSNK1DP48730 415 aa4.77□□□□□ -1.65
ATXN3-239ENST00000556315 MEOX1P50221 254 aa4.77□□□□□ -1.65
ATXN3-239ENST00000556315 NDST2P52849 883 aa4.77□□□□□ -1.65
ATXN3-239ENST00000556315 SESN2P58004 480 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-239ENST00000556315 YBEYP58557 167 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-239ENST00000556315 ACTR1AP61163 376 aa4.77□□□□□ -1.65
ATXN3-239ENST00000556315 FOXM1Q08050 763 aa4.77□□□□□ -1.65
ATXN3-239ENST00000556315 RALGDSQ12967 914 aa4.77□□□□□ -1.65
ATXN3-239ENST00000556315 DNASE1L3Q13609 305 aa4.77□□□□□ -1.65
ATXN3-239ENST00000556315 ACOX1Q15067 660 aa4.77□□□□□ -1.65
ATXN3-239ENST00000556315 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.77□□□□□ -1.65
ATXN3-239ENST00000556315 PTPN20Q4JDL3 420 aa4.77□□□□□ -1.65
ATXN3-239ENST00000556315 CT83Q5H943 113 aa4.77□□□□□ -1.65
ATXN3-239ENST00000556315 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-239ENST00000556315 ZNF658Q5TYW1 1059 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-239ENST00000556315 MANEALQ5VSG8 457 aa4.77□□□□□ -1.65
ATXN3-239ENST00000556315 JMJD6Q6NYC1 403 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-239ENST00000556315 DPPA4Q7L190 304 aa4.77□□□□□ -1.65
ATXN3-239ENST00000556315 ARCQ7LC44 396 aa4.77□□□□□ -1.65
ATXN3-239ENST00000556315 BNIPLQ7Z465 357 aa4.77□□□□□ -1.65
ATXN3-239ENST00000556315 TMEM135Q86UB9 458 aa4.77□□□□□ -1.65
ATXN3-239ENST00000556315 FAM131BQ86XD5 332 aa4.77□□□□□ -1.65
ATXN3-239ENST00000556315 CAMK1DQ8IU85 385 aa4.77□□□□□ -1.65
ATXN3-239ENST00000556315 PLXDC1Q8IUK5 500 aa4.77□□□□□ -1.65
ATXN3-239ENST00000556315 KBTBD2Q8IY47 623 aa4.77□□□□□ -1.65
ATXN3-239ENST00000556315 PNPLA2Q96AD5 504 aa4.77□□□□□ -1.65
ATXN3-239ENST00000556315 C18orf8Q96DM3 657 aa4.77□□□□□ -1.65
ATXN3-239ENST00000556315 STAMBPL1Q96FJ0 436 aa4.77□□□□□ -1.65
ATXN3-239ENST00000556315 DHTKD1Q96HY7 919 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-239ENST00000556315 ZNF747Q9BV97 191 aa4.77□□□□□ -1.65
ATXN3-239ENST00000556315 GPR87Q9BY21 358 aa4.77□□□□□ -1.65
ATXN3-239ENST00000556315 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-239ENST00000556315 FRMD8Q9BZ67 464 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-239ENST00000556315 ULBP3Q9BZM4 244 aa4.77□□□□□ -1.65
ATXN3-239ENST00000556315 STN1Q9H668 368 aaKnown RBP4.77□□□□□ -1.65
ATXN3-239ENST00000556315 SUDS3Q9H7L9 328 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-239ENST00000556315 SARS2Q9NP81 518 aaKnown RBP4.77□□□□□ -1.65
ATXN3-239ENST00000556315 LHX9Q9NQ69 397 aa4.77□□□□□ -1.65
ATXN3-239ENST00000556315 ADAM29Q9UKF5 820 aa4.77□□□□□ -1.65
ATXN3-239ENST00000556315 SUFUQ9UMX1 484 aa4.77□□□□□ -1.65
ATXN3-239ENST00000556315 G3BP2Q9UN86 482 aaKnown RBP4.77□□□□□ -1.65
ATXN3-239ENST00000556315 SLC17A4Q9Y2C5 497 aa4.77□□□□□ -1.65
ATXN3-239ENST00000556315 VWA7Q9Y334 891 aa4.77□□□□□ -1.65
ATXN3-239ENST00000556315 DOCK9Q9BZ29 2069 aa4.77□□□□□ -1.65
ATXN3-239ENST00000556315 TRIM49BA6NDI0 452 aa4.76□□□□□ -1.65
ATXN3-239ENST00000556315 GOLGA6L3A6NEY3 463 aa4.76□□□□□ -1.65
ATXN3-239ENST00000556315 ANKUB1A6NFN9 424 aa4.76□□□□□ -1.65
ATXN3-239ENST00000556315 BECN2A8MW95 431 aa4.76□□□□□ -1.65
ATXN3-239ENST00000556315 A8MX80 341 aa4.76□□□□□ -1.65
ATXN3-239ENST00000556315 RASA4BC9J798 803 aa4.76□□□□□ -1.65
ATXN3-239ENST00000556315 FAM72CH0Y354 149 aa4.76□□□□□ -1.65
ATXN3-239ENST00000556315 PSMA7O14818 248 aa4.76□□□□□ -1.65
ATXN3-239ENST00000556315 TOX3O15405 576 aaPredicted RBP4.76□□□□□ -1.65
ATXN3-239ENST00000556315 RASA4O43374 803 aa4.76□□□□□ -1.65
ATXN3-239ENST00000556315 SPAG6O75602 509 aa4.76□□□□□ -1.65
ATXN3-239ENST00000556315 CEACAM4O75871 244 aa4.76□□□□□ -1.65
ATXN3-239ENST00000556315 KIAA0754O94854 1291 aa4.76□□□□□ -1.65
ATXN3-239ENST00000556315 NDUFA10O95299 355 aa4.76□□□□□ -1.65
ATXN3-239ENST00000556315 SMC2O95347 1197 aa4.76□□□□□ -1.65
ATXN3-239ENST00000556315 MYBL2P10244 700 aa4.76□□□□□ -1.65
ATXN3-239ENST00000556315 FGF5P12034 268 aa4.76□□□□□ -1.65
ATXN3-239ENST00000556315 GM2AP17900 193 aa4.76□□□□□ -1.65
ATXN3-239ENST00000556315 ITGA3P26006 1051 aa4.76□□□□□ -1.65
ATXN3-239ENST00000556315 TEAD1P28347 426 aa4.76□□□□□ -1.65
ATXN3-239ENST00000556315 SERPINA4P29622 427 aa4.76□□□□□ -1.65
ATXN3-239ENST00000556315 CASP14P31944 242 aa4.76□□□□□ -1.65
ATXN3-239ENST00000556315 POLD2P49005 469 aa4.76□□□□□ -1.65
ATXN3-239ENST00000556315 HMGA2P52926 109 aa4.76□□□□□ -1.65
ATXN3-239ENST00000556315 NRG3P56975 720 aa4.76□□□□□ -1.65
ATXN3-239ENST00000556315 BPIFB4P59827 614 aa4.76□□□□□ -1.65
ATXN3-239ENST00000556315 RPS15P62841 145 aaKnown RBP4.76□□□□□ -1.65
ATXN3-239ENST00000556315 KRT85P78386 507 aa4.76□□□□□ -1.65
ATXN3-239ENST00000556315 CDK3Q00526 305 aa4.76□□□□□ -1.65
ATXN3-239ENST00000556315 HHEXQ03014 270 aa4.76□□□□□ -1.65
ATXN3-239ENST00000556315 BCL2L1Q07817 233 aa4.76□□□□□ -1.65
ATXN3-239ENST00000556315 NSUN2Q08J23 767 aaKnown RBP eCLIP4.76□□□□□ -1.65
ATXN3-239ENST00000556315 STIM1Q13586 685 aa4.76□□□□□ -1.65
ATXN3-239ENST00000556315 USP10Q14694 798 aaKnown RBP4.76□□□□□ -1.65
ATXN3-239ENST00000556315 CHRNA6Q15825 494 aa4.76□□□□□ -1.65
ATXN3-239ENST00000556315 MAN2A1Q16706 1144 aa4.76□□□□□ -1.65
ATXN3-239ENST00000556315 LRRK1Q38SD2 2015 aa4.76□□□□□ -1.65
ATXN3-239ENST00000556315 PARP15Q460N3 678 aa4.76□□□□□ -1.65
ATXN3-239ENST00000556315 PRR30Q53SZ7 412 aaPredicted RBP4.76□□□□□ -1.65
ATXN3-239ENST00000556315 ZMAT1Q5H9K5 638 aa4.76□□□□□ -1.65
ATXN3-239ENST00000556315 FAM102AQ5T9C2 384 aaPredicted RBP4.76□□□□□ -1.65
ATXN3-239ENST00000556315 FAM72AQ5TYM5 149 aa4.76□□□□□ -1.65
ATXN3-239ENST00000556315 FAM72DQ6L9T8 149 aa4.76□□□□□ -1.65
ATXN3-239ENST00000556315 IYDQ6PHW0 289 aa4.76□□□□□ -1.65
ATXN3-239ENST00000556315 ARHGEF18Q6ZSZ5 1173 aa4.76□□□□□ -1.65
ATXN3-239ENST00000556315 SRLQ86TD4 932 aa4.76□□□□□ -1.65
ATXN3-239ENST00000556315 SYVN1Q86TM6 617 aa4.76□□□□□ -1.65
ATXN3-239ENST00000556315 SLC9B2Q86UD5 537 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms