RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 PIH1D2Q8WWB5 315 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 RPL10LQ96L21 214 aaKnown RBP6.73□□□□□ -1.33
SLIRP-204ENST00000555890 UBXN10Q96LJ8 280 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 RMDN2Q96LZ7 410 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 ZSWIM3Q96MP5 696 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 AARSD1Q9BTE6 412 aaKnown RBP6.73□□□□□ -1.33
SLIRP-204ENST00000555890 WNT10AQ9GZT5 417 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 ILKAPQ9H0C8 392 aaPredicted RBP6.73□□□□□ -1.33
SLIRP-204ENST00000555890 STN1Q9H668 368 aaKnown RBP6.73□□□□□ -1.33
SLIRP-204ENST00000555890 TXLNGQ9NUQ3 528 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 ABCF3Q9NUQ8 709 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 POLR3BQ9NW08 1133 aaPredicted RBP6.73□□□□□ -1.33
SLIRP-204ENST00000555890 OBP2AQ9NY56 170 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 TAS2R13Q9NYV9 303 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 IL17CQ9P0M4 197 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 CPSF2Q9P2I0 782 aaKnown RBP6.73□□□□□ -1.33
SLIRP-204ENST00000555890 HEY2Q9UBP5 337 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 KLF15Q9UIH9 416 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 ZFP69BQ9UJL9 534 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 APPL1Q9UKG1 709 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 ERVW-1Q9UQF0 538 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 APOBEC2Q9Y235 224 aaKnown RBP6.73□□□□□ -1.33
SLIRP-204ENST00000555890 ZNF106Q9H2Y7 1883 aaKnown RBP6.73□□□□□ -1.33
SLIRP-204ENST00000555890 ATG2BQ96BY7 2078 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 SCN8AQ9UQD0 1980 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 ELOA3CA0A087WX78 387 aaPredicted RBP6.72□□□□□ -1.33
SLIRP-204ENST00000555890 C1orf232A0A0U1RR37 186 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 CCDC189A1A4V9 331 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 CFAP73A6NFT4 308 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 ELOA3DA6NLF2 546 aaPredicted RBP6.72□□□□□ -1.33
SLIRP-204ENST00000555890 WASH3PC4AMC7 463 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 ANKRD65E5RJM6 399 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 TRAFD1O14545 582 aaPredicted RBP6.72□□□□□ -1.33
SLIRP-204ENST00000555890 HOXC11O43248 304 aaPredicted RBP6.72□□□□□ -1.33
SLIRP-204ENST00000555890 HNRNPCL1O60812 293 aaKnown RBP6.72□□□□□ -1.33
SLIRP-204ENST00000555890 SMIM24O75264 130 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 DNAJC8O75937 253 aaPredicted RBP6.72□□□□□ -1.33
SLIRP-204ENST00000555890 RHOBTB1O94844 696 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 PIGNO95427 931 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 ITGB2P05107 769 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 SRPRAP08240 638 aaKnown RBP6.72□□□□□ -1.33
SLIRP-204ENST00000555890 ALPIP09923 528 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 KITP10721 976 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 PKMP14618 531 aaKnown RBP6.72□□□□□ -1.33
SLIRP-204ENST00000555890 ZNF7P17097 686 aaPredicted RBP6.72□□□□□ -1.33
SLIRP-204ENST00000555890 ITGALP20701 1170 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 CD9P21926 228 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 ALAS2P22557 587 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 HOXA6P31267 233 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 FMO4P31512 558 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 HNF1BP35680 557 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 DCTP40126 519 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 SKIV2L2P42285 1042 aaKnown RBP6.72□□□□□ -1.33
SLIRP-204ENST00000555890 DGKGP49619 791 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 STK19P49842 368 aaPredicted RBP6.72□□□□□ -1.33
SLIRP-204ENST00000555890 SUOXP51687 545 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 CCNHP51946 323 aaPredicted RBP6.72□□□□□ -1.33
SLIRP-204ENST00000555890 AQP5P55064 265 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 DNAJB13P59910 316 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 ATP6V0D1P61421 351 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 TLE1Q04724 770 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 BNIP1Q12981 228 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 PRKAA1Q13131 559 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 SEMA3AQ14563 771 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 ZNF460Q14592 562 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 PDGFRLQ15198 375 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 ELOA3BQ3SY89 546 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 GALNTL6Q49A17 601 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 GPR33Q49SQ1 333 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 ZDHHC20Q5W0Z9 365 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 TANGO2Q6ICL3 276 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 GDPD4Q6W3E5 623 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 USP45Q70EL2 814 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 ADIPOR2Q86V24 386 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 KBTBD6Q86V97 674 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 C12orf40Q86WS4 652 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 MCATQ8IVS2 390 aaKnown RBP6.72□□□□□ -1.33
SLIRP-204ENST00000555890 KIRREL3Q8IZU9 778 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 NKAPQ8N5F7 415 aaKnown RBP6.72□□□□□ -1.33
SLIRP-204ENST00000555890 NAT16Q8N8M0 369 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 ELOA3Q8NG57 546 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 OR6Y1Q8NGX8 325 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 RIN3Q8TB24 985 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 BPIFB1Q8TDL5 484 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 LPGAT1Q92604 370 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 SMARCD2Q92925 531 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 ERP27Q96DN0 273 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 WDR89Q96FK6 387 aaPredicted RBP6.72□□□□□ -1.33
SLIRP-204ENST00000555890 SCRN2Q96FV2 425 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 RILPQ96NA2 401 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 CLUHP3Q96NS8 147 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 GPR78Q96P69 363 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 LYSMD1Q96S90 227 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 OLFM1Q99784 485 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 HEPHQ9BQS7 1158 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 GATA5Q9BWX5 397 aaPredicted RBP6.72□□□□□ -1.33
SLIRP-204ENST00000555890 DRC3Q9H069 523 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 MYLK2Q9H1R3 596 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 ZDHHC6Q9H6R6 413 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 ECT2Q9H8V3 914 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms