RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 PAPD7Q5XG87 772 aaKnown RBP12.31□□□□□ -0.44
HNRNPC-221ENST00000555883 FAM199XQ6PEV8 388 aaPredicted RBP12.31□□□□□ -0.44
HNRNPC-221ENST00000555883 NLRP9Q7RTR0 991 aa12.31□□□□□ -0.44
HNRNPC-221ENST00000555883 TMEM135Q86UB9 458 aa12.31□□□□□ -0.44
HNRNPC-221ENST00000555883 OR13J1Q8NGT2 312 aa12.31□□□□□ -0.44
HNRNPC-221ENST00000555883 OR5K2Q8NHB8 316 aa12.31□□□□□ -0.44
HNRNPC-221ENST00000555883 ADAMTS17Q8TE56 1095 aa12.31□□□□□ -0.44
HNRNPC-221ENST00000555883 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.31□□□□□ -0.448e-7■■■■■ 34
HNRNPC-221ENST00000555883 PPM1MQ96MI6 270 aa12.31□□□□□ -0.44
HNRNPC-221ENST00000555883 TRAPPC9Q96Q05 1148 aa12.31□□□□□ -0.44
HNRNPC-221ENST00000555883 TTC1Q99614 292 aa12.31□□□□□ -0.44
HNRNPC-221ENST00000555883 TLR10Q9BXR5 811 aa12.31□□□□□ -0.44
HNRNPC-221ENST00000555883 TSGA10Q9BZW7 698 aa12.31□□□□□ -0.44
HNRNPC-221ENST00000555883 SMARCAL1Q9NZC9 954 aa12.31□□□□□ -0.44
HNRNPC-221ENST00000555883 OR6C2Q9NZP2 312 aa12.31□□□□□ -0.44
HNRNPC-221ENST00000555883 TLK1Q9UKI8 766 aa12.31□□□□□ -0.44
HNRNPC-221ENST00000555883 PCDHGB7Q9Y5F8 929 aa12.31□□□□□ -0.44
HNRNPC-221ENST00000555883 CAPN6Q9Y6Q1 641 aa12.31□□□□□ -0.44
HNRNPC-221ENST00000555883 TCRBV7S2A1N4TA0A589 114 aa12.3□□□□□ -0.44
HNRNPC-221ENST00000555883 SLC5A10A0PJK1 596 aa12.3□□□□□ -0.44
HNRNPC-221ENST00000555883 CLEC18AA5D8T8 446 aa12.3□□□□□ -0.44
HNRNPC-221ENST00000555883 LIASO43766 372 aa12.3□□□□□ -0.44
HNRNPC-221ENST00000555883 OR56A5P0C7T3 313 aa12.3□□□□□ -0.44
HNRNPC-221ENST00000555883 ST6GAL1P15907 406 aa12.3□□□□□ -0.44
HNRNPC-221ENST00000555883 CYP2A7P20853 494 aa12.3□□□□□ -0.44
HNRNPC-221ENST00000555883 PPARGP37231 505 aaPredicted RBP12.3□□□□□ -0.44
HNRNPC-221ENST00000555883 ARCN1P48444 511 aaKnown RBP12.3□□□□□ -0.44
HNRNPC-221ENST00000555883 CD97P48960 835 aa12.3□□□□□ -0.44
HNRNPC-221ENST00000555883 ITGA1P56199 1179 aa12.3□□□□□ -0.44
HNRNPC-221ENST00000555883 SEL1L2Q5TEA6 688 aa12.3□□□□□ -0.44
HNRNPC-221ENST00000555883 AFTPHQ6ULP2 937 aa12.3□□□□□ -0.44
HNRNPC-221ENST00000555883 SPESP1Q6UW49 350 aa12.3□□□□□ -0.44
HNRNPC-221ENST00000555883 CLEC18BQ6UXF7 455 aa12.3□□□□□ -0.44
HNRNPC-221ENST00000555883 ASB18Q6ZVZ8 466 aa12.3□□□□□ -0.44
HNRNPC-221ENST00000555883 DNAAF3Q8N9W5 541 aa12.3□□□□□ -0.44
HNRNPC-221ENST00000555883 TEX19Q8NA77 164 aa12.3□□□□□ -0.44
HNRNPC-221ENST00000555883 CLEC18CQ8NCF0 446 aa12.3□□□□□ -0.44
HNRNPC-221ENST00000555883 OR1L3Q8NH93 324 aa12.3□□□□□ -0.44
HNRNPC-221ENST00000555883 MR1Q95460 341 aa12.3□□□□□ -0.44
HNRNPC-221ENST00000555883 TCTN2Q96GX1 697 aa12.3□□□□□ -0.44
HNRNPC-221ENST00000555883 RUFY1Q96T51 708 aa12.3□□□□□ -0.44
HNRNPC-221ENST00000555883 C17orf62Q9BQA9 187 aa12.3□□□□□ -0.44
HNRNPC-221ENST00000555883 DHRS4Q9BTZ2 278 aa12.3□□□□□ -0.44
HNRNPC-221ENST00000555883 CHST8Q9H2A9 424 aa12.3□□□□□ -0.44
HNRNPC-221ENST00000555883 ACTR5Q9H9F9 607 aaPredicted RBP12.3□□□□□ -0.44
HNRNPC-221ENST00000555883 PCMTD2Q9NV79 361 aa12.3□□□□□ -0.44
HNRNPC-221ENST00000555883 ACTR10Q9NZ32 417 aa12.3□□□□□ -0.44
HNRNPC-221ENST00000555883 TCFL5Q9UL49 500 aa12.3□□□□□ -0.44
HNRNPC-221ENST00000555883 ICKQ9UPZ9 632 aa12.3□□□□□ -0.44
HNRNPC-221ENST00000555883 ASF1AQ9Y294 204 aa12.3□□□□□ -0.44
HNRNPC-221ENST00000555883 HECTD1Q9ULT8 2610 aa12.3□□□□□ -0.44
HNRNPC-221ENST00000555883 CCDC162PA2VCL2 907 aa12.29□□□□□ -0.44
HNRNPC-221ENST00000555883 TMEM150CB9EJG8 249 aa12.29□□□□□ -0.44
HNRNPC-221ENST00000555883 E7EQ34 232 aa12.29□□□□□ -0.44
HNRNPC-221ENST00000555883 H3BMH7 237 aa12.29□□□□□ -0.44
HNRNPC-221ENST00000555883 KRT86O43790 486 aa12.29□□□□□ -0.44
HNRNPC-221ENST00000555883 CEACAM4O75871 244 aa12.29□□□□□ -0.44
HNRNPC-221ENST00000555883 CAPN1P07384 714 aa12.29□□□□□ -0.44
HNRNPC-221ENST00000555883 CD63P08962 238 aa12.29□□□□□ -0.44
HNRNPC-221ENST00000555883 PRSS56P0CW18 603 aa12.29□□□□□ -0.44
HNRNPC-221ENST00000555883 ADRA1DP25100 572 aa12.29□□□□□ -0.44
HNRNPC-221ENST00000555883 RPS18P62269 152 aaKnown RBP12.29□□□□□ -0.44
HNRNPC-221ENST00000555883 IL10RAQ13651 578 aa12.29□□□□□ -0.44
HNRNPC-221ENST00000555883 DNAJC21Q5F1R6 531 aaKnown RBP12.29□□□□□ -0.44
HNRNPC-221ENST00000555883 TSTD2Q5T7W7 516 aa12.29□□□□□ -0.44
HNRNPC-221ENST00000555883 ZNF385CQ66K41 422 aaPredicted RBP12.29□□□□□ -0.44
HNRNPC-221ENST00000555883 FBXO38Q6PIJ6 1188 aa12.29□□□□□ -0.44
HNRNPC-221ENST00000555883 HPS6Q86YV9 775 aa12.29□□□□□ -0.44
HNRNPC-221ENST00000555883 SYTL1Q8IYJ3 562 aa12.29□□□□□ -0.44
HNRNPC-221ENST00000555883 C19orf47Q8N9M1 422 aaKnown RBP12.29□□□□□ -0.44
HNRNPC-221ENST00000555883 PHC3Q8NDX5 983 aa12.29□□□□□ -0.44
HNRNPC-221ENST00000555883 OR52K1Q8NGK4 314 aa12.29□□□□□ -0.44
HNRNPC-221ENST00000555883 OR5AR1Q8NGP9 310 aa12.29□□□□□ -0.44
HNRNPC-221ENST00000555883 ATG4AQ8WYN0 398 aa12.29□□□□□ -0.44
HNRNPC-221ENST00000555883 ELMO1Q92556 727 aa12.29□□□□□ -0.44
HNRNPC-221ENST00000555883 MIB2Q96AX9 1013 aa12.29□□□□□ -0.44
HNRNPC-221ENST00000555883 CLIP3Q96DZ5 547 aa12.29□□□□□ -0.44
HNRNPC-221ENST00000555883 RNF31Q96EP0 1072 aa12.29□□□□□ -0.44
HNRNPC-221ENST00000555883 DESI2Q9BSY9 194 aa12.29□□□□□ -0.44
HNRNPC-221ENST00000555883 HGH1Q9BTY7 390 aa12.29□□□□□ -0.44
HNRNPC-221ENST00000555883 TSSK1BQ9BXA7 367 aa12.29□□□□□ -0.44
HNRNPC-221ENST00000555883 ING2Q9H160 280 aa12.29□□□□□ -0.44
HNRNPC-221ENST00000555883 ETNK1Q9HBU6 452 aa12.29□□□□□ -0.44
HNRNPC-221ENST00000555883 SNX7Q9UNH6 387 aa12.29□□□□□ -0.44
HNRNPC-221ENST00000555883 AP1M2Q9Y6Q5 423 aa12.29□□□□□ -0.44
HNRNPC-221ENST00000555883 A0A0U1RQJ8 604 aa12.28□□□□□ -0.44
HNRNPC-221ENST00000555883 BHMG1C9JSJ3 638 aaPredicted RBP12.28□□□□□ -0.44
HNRNPC-221ENST00000555883 K7EM74 188 aa12.28□□□□□ -0.44
HNRNPC-221ENST00000555883 AP3B1O00203 1094 aa12.28□□□□□ -0.44
HNRNPC-221ENST00000555883 LMAN1P49257 510 aa12.28□□□□□ -0.44
HNRNPC-221ENST00000555883 PRKG2Q13237 762 aa12.28□□□□□ -0.44
HNRNPC-221ENST00000555883 KIR2DS3Q14952 304 aa12.28□□□□□ -0.44
HNRNPC-221ENST00000555883 NCF4Q15080 339 aa12.28□□□□□ -0.44
HNRNPC-221ENST00000555883 SLC5A12Q1EHB4 618 aa12.28□□□□□ -0.44
HNRNPC-221ENST00000555883 SYTL3Q4VX76 610 aa12.28□□□□□ -0.44
HNRNPC-221ENST00000555883 AARS2Q5JTZ9 985 aaKnown RBP12.28□□□□□ -0.44
HNRNPC-221ENST00000555883 DRICH1Q6PGQ1 229 aaPredicted RBP12.28□□□□□ -0.44
HNRNPC-221ENST00000555883 FAM198BQ6UWH4 519 aa12.28□□□□□ -0.44
HNRNPC-221ENST00000555883 C4orf22Q6V702 233 aa12.28□□□□□ -0.44
HNRNPC-221ENST00000555883 UNC5AQ6ZN44 842 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms