RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 OR4L1Q8NH43 312 aa13.4□□□□□ -0.26
PCNX4-209ENST00000555569 PEX13Q92968 403 aa13.4□□□□□ -0.26
PCNX4-209ENST00000555569 NRTNQ99748 197 aa13.4□□□□□ -0.26
PCNX4-209ENST00000555569 TLR10Q9BXR5 811 aa13.4□□□□□ -0.26
PCNX4-209ENST00000555569 XKR8Q9H6D3 395 aa13.4□□□□□ -0.26
PCNX4-209ENST00000555569 SYTL2Q9HCH5 934 aa13.4□□□□□ -0.26
PCNX4-209ENST00000555569 LATS2Q9NRM7 1088 aa13.4□□□□□ -0.26
PCNX4-209ENST00000555569 POLHQ9Y253 713 aa13.4□□□□□ -0.26
PCNX4-209ENST00000555569 ASF1AQ9Y294 204 aa13.4□□□□□ -0.26
PCNX4-209ENST00000555569 DRG1Q9Y295 367 aaKnown RBP13.4□□□□□ -0.26
PCNX4-209ENST00000555569 ZKSCAN5Q9Y2L8 839 aa13.4□□□□□ -0.26
PCNX4-209ENST00000555569 SLC5A10A0PJK1 596 aa13.39□□□□□ -0.27
PCNX4-209ENST00000555569 CDC14CA4D256 554 aa13.39□□□□□ -0.27
PCNX4-209ENST00000555569 C2orf74A8MZ97 194 aa13.39□□□□□ -0.27
PCNX4-209ENST00000555569 PYCARD-AS1I3L0S3 204 aa13.39□□□□□ -0.27
PCNX4-209ENST00000555569 SUV39H1O43463 412 aa13.39□□□□□ -0.27
PCNX4-209ENST00000555569 FGGP02679 453 aa13.39□□□□□ -0.27
PCNX4-209ENST00000555569 FURINP09958 794 aa13.39□□□□□ -0.27
PCNX4-209ENST00000555569 ST6GAL1P15907 406 aa13.39□□□□□ -0.27
PCNX4-209ENST00000555569 PPARGP37231 505 aaPredicted RBP13.39□□□□□ -0.27
PCNX4-209ENST00000555569 PLOD1Q02809 727 aaPredicted RBP13.39□□□□□ -0.27
PCNX4-209ENST00000555569 FASTKD1Q53R41 847 aaKnown RBP13.39□□□□□ -0.27
PCNX4-209ENST00000555569 NAPRTQ6XQN6 538 aa13.39□□□□□ -0.27
PCNX4-209ENST00000555569 ZNF534Q76KX8 674 aa13.39□□□□□ -0.27
PCNX4-209ENST00000555569 ADGRF3Q8IZF5 1079 aa13.39□□□□□ -0.27
PCNX4-209ENST00000555569 TRIM58Q8NG06 486 aa13.39□□□□□ -0.27
PCNX4-209ENST00000555569 OR5AR1Q8NGP9 310 aa13.39□□□□□ -0.27
PCNX4-209ENST00000555569 C9orf43Q8TAL5 461 aaPredicted RBP13.39□□□□□ -0.27
PCNX4-209ENST00000555569 SGSM3Q96HU1 749 aa13.39□□□□□ -0.27
PCNX4-209ENST00000555569 PITPNM3Q9BZ71 974 aa13.39□□□□□ -0.27
PCNX4-209ENST00000555569 TWSG1Q9GZX9 223 aa13.39□□□□□ -0.27
PCNX4-209ENST00000555569 AKIRIN1Q9H9L7 192 aaPredicted RBP13.39□□□□□ -0.27
PCNX4-209ENST00000555569 EIF2B3Q9NR50 452 aaKnown RBP13.39□□□□□ -0.27
PCNX4-209ENST00000555569 ACTR10Q9NZ32 417 aa13.39□□□□□ -0.27
PCNX4-209ENST00000555569 ICKQ9UPZ9 632 aa13.39□□□□□ -0.27
PCNX4-209ENST00000555569 KCNMB2Q9Y691 235 aa13.39□□□□□ -0.27
PCNX4-209ENST00000555569 TENM4Q6N022 2769 aa13.39□□□□□ -0.27
PCNX4-209ENST00000555569 BSNQ9UPA5 3926 aa13.39□□□□□ -0.27
PCNX4-209ENST00000555569 PIPSLA2A3N6 862 aa13.38□□□□□ -0.27
PCNX4-209ENST00000555569 TMEM150CB9EJG8 249 aa13.38□□□□□ -0.27
PCNX4-209ENST00000555569 BHMG1C9JSJ3 638 aaPredicted RBP13.38□□□□□ -0.27
PCNX4-209ENST00000555569 MAP3K7O43318 606 aa13.38□□□□□ -0.27
PCNX4-209ENST00000555569 CEP104O60308 925 aa13.38□□□□□ -0.27
PCNX4-209ENST00000555569 RECKO95980 971 aa13.38□□□□□ -0.27
PCNX4-209ENST00000555569 SHMT2P34897 504 aa13.38□□□□□ -0.27
PCNX4-209ENST00000555569 SESN2P58004 480 aaPredicted RBP13.38□□□□□ -0.27
PCNX4-209ENST00000555569 BASP1P80723 227 aaKnown RBP13.38□□□□□ -0.27
PCNX4-209ENST00000555569 CCZ1BP86790 482 aa13.38□□□□□ -0.27
PCNX4-209ENST00000555569 CCZ1P86791 482 aaPredicted RBP13.38□□□□□ -0.27
PCNX4-209ENST00000555569 GPS2Q13227 327 aa13.38□□□□□ -0.27
PCNX4-209ENST00000555569 SEMA3AQ14563 771 aa13.38□□□□□ -0.27
PCNX4-209ENST00000555569 AARS2Q5JTZ9 985 aaKnown RBP13.38□□□□□ -0.27
PCNX4-209ENST00000555569 PCID2Q5JVF3 399 aa13.38□□□□□ -0.27
PCNX4-209ENST00000555569 FAM199XQ6PEV8 388 aaPredicted RBP13.38□□□□□ -0.27
PCNX4-209ENST00000555569 GSTA5Q7RTV2 222 aa13.38□□□□□ -0.27
PCNX4-209ENST00000555569 HOOK3Q86VS8 718 aa13.38□□□□□ -0.27
PCNX4-209ENST00000555569 PTRH1Q86Y79 214 aaKnown RBP13.38□□□□□ -0.27
PCNX4-209ENST00000555569 TBC1D21Q8IYX1 336 aa13.38□□□□□ -0.27
PCNX4-209ENST00000555569 OR5K2Q8NHB8 316 aa13.38□□□□□ -0.27
PCNX4-209ENST00000555569 CPT1BQ92523 772 aa13.38□□□□□ -0.27
PCNX4-209ENST00000555569 MR1Q95460 341 aa13.38□□□□□ -0.27
PCNX4-209ENST00000555569 LRFN5Q96NI6 719 aa13.38□□□□□ -0.27
PCNX4-209ENST00000555569 TRAPPC9Q96Q05 1148 aa13.38□□□□□ -0.27
PCNX4-209ENST00000555569 RUFY1Q96T51 708 aa13.38□□□□□ -0.27
PCNX4-209ENST00000555569 GPR87Q9BY21 358 aa13.38□□□□□ -0.27
PCNX4-209ENST00000555569 TRIM4Q9C037 500 aa13.38□□□□□ -0.27
PCNX4-209ENST00000555569 ACTL8Q9H568 366 aa13.38□□□□□ -0.27
PCNX4-209ENST00000555569 CHRAC1Q9NRG0 131 aa13.38□□□□□ -0.27
PCNX4-209ENST00000555569 POLG2Q9UHN1 485 aa13.38□□□□□ -0.27
PCNX4-209ENST00000555569 ANAPC5Q9UJX4 755 aa13.38□□□□□ -0.27
PCNX4-209ENST00000555569 TDRKHQ9Y2W6 561 aaKnown RBP13.38□□□□□ -0.27
PCNX4-209ENST00000555569 MYO18BQ8IUG5 2567 aa13.38□□□□□ -0.27
PCNX4-209ENST00000555569 FLNBO75369 2602 aaKnown RBP13.37□□□□□ -0.27
PCNX4-209ENST00000555569 MED13Q9UHV7 2174 aa13.37□□□□□ -0.27
PCNX4-209ENST00000555569 AP3B1O00203 1094 aa13.37□□□□□ -0.27
PCNX4-209ENST00000555569 NRDCO43847 1150 aa13.37□□□□□ -0.27
PCNX4-209ENST00000555569 WISP1O95388 367 aa13.37□□□□□ -0.27
PCNX4-209ENST00000555569 KLK3P07288 261 aaPredicted RBP13.37□□□□□ -0.27
PCNX4-209ENST00000555569 MSL3P1P0C860 447 aa13.37□□□□□ -0.27
PCNX4-209ENST00000555569 PVRP15151 417 aa13.37□□□□□ -0.27
PCNX4-209ENST00000555569 PTPN4P29074 926 aa13.37□□□□□ -0.27
PCNX4-209ENST00000555569 CCR7P32248 378 aa13.37□□□□□ -0.27
PCNX4-209ENST00000555569 KCNJ1P48048 391 aa13.37□□□□□ -0.27
PCNX4-209ENST00000555569 CSE1LP55060 971 aaKnown RBP13.37□□□□□ -0.27
PCNX4-209ENST00000555569 RPS18P62269 152 aaKnown RBP13.37□□□□□ -0.27
PCNX4-209ENST00000555569 RPS15P62841 145 aaKnown RBP13.37□□□□□ -0.27
PCNX4-209ENST00000555569 CRADDP78560 199 aa13.37□□□□□ -0.27
PCNX4-209ENST00000555569 ABRQ12979 859 aa13.37□□□□□ -0.27
PCNX4-209ENST00000555569 PRAMEF17Q5VTA0 474 aa13.37□□□□□ -0.27
PCNX4-209ENST00000555569 SPESP1Q6UW49 350 aa13.37□□□□□ -0.27
PCNX4-209ENST00000555569 UNC5AQ6ZN44 842 aa13.37□□□□□ -0.27
PCNX4-209ENST00000555569 TMEM135Q86UB9 458 aa13.37□□□□□ -0.27
PCNX4-209ENST00000555569 SLC38A9Q8NBW4 561 aa13.37□□□□□ -0.27
PCNX4-209ENST00000555569 OR1L3Q8NH93 324 aa13.37□□□□□ -0.27
PCNX4-209ENST00000555569 SEC14L1Q92503 715 aa13.37□□□□□ -0.27
PCNX4-209ENST00000555569 ABHD17AQ96GS6 310 aa13.37□□□□□ -0.27
PCNX4-209ENST00000555569 CARD6Q9BX69 1037 aa13.37□□□□□ -0.27
PCNX4-209ENST00000555569 TSSK1BQ9BXA7 367 aa13.37□□□□□ -0.27
PCNX4-209ENST00000555569 KLHL25Q9H0H3 589 aa13.37□□□□□ -0.27
PCNX4-209ENST00000555569 ZNF71Q9NQZ8 489 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms