RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 GSAPA4D1B5 854 aa19.9■□□□□ 0.78
VTI1B-205ENST00000555543 F8W8V4 182 aa19.9■□□□□ 0.78
VTI1B-205ENST00000555543 F7P08709 466 aaPredicted RBP19.9■□□□□ 0.78
VTI1B-205ENST00000555543 RPS3P23396 243 aaKnown RBP eCLIP19.9■□□□□ 0.78
VTI1B-205ENST00000555543 ATP1A2P50993 1020 aa19.9■□□□□ 0.78
VTI1B-205ENST00000555543 EIF3BP55884 814 aaKnown RBP19.9■□□□□ 0.78
VTI1B-205ENST00000555543 PLOD1Q02809 727 aaPredicted RBP19.9■□□□□ 0.78
VTI1B-205ENST00000555543 TUBB3Q13509 450 aa19.9■□□□□ 0.78
VTI1B-205ENST00000555543 DHX34Q14147 1143 aaKnown RBP19.9■□□□□ 0.78
VTI1B-205ENST00000555543 IL11RAQ14626 422 aa19.9■□□□□ 0.78
VTI1B-205ENST00000555543 PTRHD1Q6GMV3 140 aaKnown RBP19.9■□□□□ 0.78
VTI1B-205ENST00000555543 MRNIPQ6NTE8 343 aa19.9■□□□□ 0.78
VTI1B-205ENST00000555543 AMIGO1Q86WK6 493 aa19.9■□□□□ 0.78
VTI1B-205ENST00000555543 ADGRF3Q8IZF5 1079 aa19.9■□□□□ 0.78
VTI1B-205ENST00000555543 C17orf53Q8N3J3 647 aaPredicted RBP19.9■□□□□ 0.78
VTI1B-205ENST00000555543 IL22RA1Q8N6P7 574 aa19.9■□□□□ 0.78
VTI1B-205ENST00000555543 OR5K2Q8NHB8 316 aa19.9■□□□□ 0.78
VTI1B-205ENST00000555543 SIGLEC10Q96LC7 697 aa19.9■□□□□ 0.78
VTI1B-205ENST00000555543 BIRC8Q96P09 236 aa19.9■□□□□ 0.78
VTI1B-205ENST00000555543 TSSK1BQ9BXA7 367 aa19.9■□□□□ 0.78
VTI1B-205ENST00000555543 TRIT1Q9H3H1 467 aaKnown RBP19.9■□□□□ 0.78
VTI1B-205ENST00000555543 GNPTGQ9UJJ9 305 aa19.9■□□□□ 0.78
VTI1B-205ENST00000555543 ATRXP46100 2492 aa19.9■□□□□ 0.78
VTI1B-205ENST00000555543 CTAGE9A4FU28 777 aa19.89■□□□□ 0.77
VTI1B-205ENST00000555543 DNALI1O14645 258 aaPredicted RBP19.89■□□□□ 0.77
VTI1B-205ENST00000555543 TIAF1O95411 115 aa19.89■□□□□ 0.77
VTI1B-205ENST00000555543 FGF5P12034 268 aa19.89■□□□□ 0.77
VTI1B-205ENST00000555543 LIFP15018 202 aa19.89■□□□□ 0.77
VTI1B-205ENST00000555543 IVDP26440 423 aa19.89■□□□□ 0.77
VTI1B-205ENST00000555543 HSD11B2P80365 405 aa19.89■□□□□ 0.77
VTI1B-205ENST00000555543 PRKAA1Q13131 559 aa19.89■□□□□ 0.77
VTI1B-205ENST00000555543 ZNF789Q5FWF6 425 aa19.89■□□□□ 0.77
VTI1B-205ENST00000555543 CENPUQ71F23 418 aa19.89■□□□□ 0.77
VTI1B-205ENST00000555543 TMEM135Q86UB9 458 aa19.89■□□□□ 0.77
VTI1B-205ENST00000555543 LRRC6Q86X45 466 aa19.89■□□□□ 0.77
VTI1B-205ENST00000555543 KMT5CQ86Y97 462 aa19.89■□□□□ 0.77
VTI1B-205ENST00000555543 KLHL7Q8IXQ5 586 aa19.89■□□□□ 0.77
VTI1B-205ENST00000555543 TBC1D21Q8IYX1 336 aa19.89■□□□□ 0.77
VTI1B-205ENST00000555543 NLGN4XQ8N0W4 816 aa19.89■□□□□ 0.77
VTI1B-205ENST00000555543 D2HGDHQ8N465 521 aa19.89■□□□□ 0.77
VTI1B-205ENST00000555543 NLGN4YQ8NFZ3 816 aaPredicted RBP19.89■□□□□ 0.77
VTI1B-205ENST00000555543 ASZ1Q8WWH4 475 aa19.89■□□□□ 0.77
VTI1B-205ENST00000555543 ULBP3Q9BZM4 244 aa19.89■□□□□ 0.77
VTI1B-205ENST00000555543 PLAGL1Q9UM63 463 aa19.89■□□□□ 0.77
VTI1B-205ENST00000555543 TDRKHQ9Y2W6 561 aaKnown RBP19.89■□□□□ 0.77
VTI1B-205ENST00000555543 RPS6KL1Q9Y6S9 549 aa19.89■□□□□ 0.77
VTI1B-205ENST00000555543 MATN2O00339 956 aa19.88■□□□□ 0.77
VTI1B-205ENST00000555543 ATXN7O15265 892 aaPredicted RBP19.88■□□□□ 0.77
VTI1B-205ENST00000555543 BANF1O75531 89 aa19.88■□□□□ 0.77
VTI1B-205ENST00000555543 SLCO2B1O94956 709 aa19.88■□□□□ 0.77
VTI1B-205ENST00000555543 ZBTB11O95625 1053 aaPredicted RBP19.88■□□□□ 0.77
VTI1B-205ENST00000555543 APOA4P06727 396 aa19.88■□□□□ 0.77
VTI1B-205ENST00000555543 PAMP19021 973 aa19.88■□□□□ 0.77
VTI1B-205ENST00000555543 OGNP20774 298 aaKnown RBP19.88■□□□□ 0.77
VTI1B-205ENST00000555543 CDH3P22223 829 aa19.88■□□□□ 0.77
VTI1B-205ENST00000555543 PRDX3P30048 256 aaKnown RBP19.88■□□□□ 0.77
VTI1B-205ENST00000555543 FMO4P31512 558 aa19.88■□□□□ 0.77
VTI1B-205ENST00000555543 ZNF470Q6ECI4 717 aa19.88■□□□□ 0.77
VTI1B-205ENST00000555543 NEPROQ6NW34 567 aa19.88■□□□□ 0.77
VTI1B-205ENST00000555543 UNC5AQ6ZN44 842 aa19.88■□□□□ 0.77
VTI1B-205ENST00000555543 SDCCAG8Q86SQ7 713 aaPredicted RBP19.88■□□□□ 0.77
VTI1B-205ENST00000555543 CILP2Q8IUL8 1156 aa19.88■□□□□ 0.77
VTI1B-205ENST00000555543 RASGRP3Q8IV61 690 aa19.88■□□□□ 0.77
VTI1B-205ENST00000555543 UNC5BQ8IZJ1 945 aa19.88■□□□□ 0.77
VTI1B-205ENST00000555543 CARFQ8N187 725 aa19.88■□□□□ 0.77
VTI1B-205ENST00000555543 TTC9Q92623 222 aa19.88■□□□□ 0.77
VTI1B-205ENST00000555543 FGF21Q9NSA1 209 aa19.88■□□□□ 0.77
VTI1B-205ENST00000555543 ACTR10Q9NZ32 417 aa19.88■□□□□ 0.77
VTI1B-205ENST00000555543 BTRCQ9Y297 605 aa19.88■□□□□ 0.77
VTI1B-205ENST00000555543 MAD1L1Q9Y6D9 718 aa19.88■□□□□ 0.77
VTI1B-205ENST00000555543 CFAP46Q8IYW2 2715 aa19.88■□□□□ 0.77
VTI1B-205ENST00000555543 LOC101059948A0A1B0GTJ6 334 aa19.87■□□□□ 0.77
VTI1B-205ENST00000555543 MAGEB16A2A368 324 aa19.87■□□□□ 0.77
VTI1B-205ENST00000555543 SLC9B1P1A6NJY1 282 aa19.87■□□□□ 0.77
VTI1B-205ENST00000555543 NIPSNAP2O75323 286 aa19.87■□□□□ 0.77
VTI1B-205ENST00000555543 SPAG6O75602 509 aa19.87■□□□□ 0.77
VTI1B-205ENST00000555543 KIAA0754O94854 1291 aa19.87■□□□□ 0.77
VTI1B-205ENST00000555543 PVRP15151 417 aa19.87■□□□□ 0.77
VTI1B-205ENST00000555543 ST6GAL1P15907 406 aa19.87■□□□□ 0.77
VTI1B-205ENST00000555543 SHMT2P34897 504 aa19.87■□□□□ 0.77
VTI1B-205ENST00000555543 ARL4DP49703 201 aa19.87■□□□□ 0.77
VTI1B-205ENST00000555543 RHDQ02161 417 aa19.87■□□□□ 0.77
VTI1B-205ENST00000555543 ABRQ12979 859 aa19.87■□□□□ 0.77
VTI1B-205ENST00000555543 TMED2Q15363 201 aa19.87■□□□□ 0.77
VTI1B-205ENST00000555543 GPR19Q15760 415 aa19.87■□□□□ 0.77
VTI1B-205ENST00000555543 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.87■□□□□ 0.77
VTI1B-205ENST00000555543 DNAJC21Q5F1R6 531 aaKnown RBP19.87■□□□□ 0.77
VTI1B-205ENST00000555543 RNF187Q5TA31 235 aaPredicted RBP19.87■□□□□ 0.77
VTI1B-205ENST00000555543 IZUMO3Q5VZ72 239 aa19.87■□□□□ 0.77
VTI1B-205ENST00000555543 PPP1R3BQ86XI6 285 aa19.87■□□□□ 0.77
VTI1B-205ENST00000555543 FAM136AQ96C01 138 aa19.87■□□□□ 0.77
VTI1B-205ENST00000555543 PANX3Q96QZ0 392 aa19.87■□□□□ 0.77
VTI1B-205ENST00000555543 TCF12Q99081 682 aa19.87■□□□□ 0.77
VTI1B-205ENST00000555543 TRIM51Q9BSJ1 452 aa19.87■□□□□ 0.77
VTI1B-205ENST00000555543 PITPNM3Q9BZ71 974 aa19.87■□□□□ 0.77
VTI1B-205ENST00000555543 KLHL25Q9H0H3 589 aa19.87■□□□□ 0.77
VTI1B-205ENST00000555543 C1GALT1Q9NS00 363 aa19.87■□□□□ 0.77
VTI1B-205ENST00000555543 SOHLH2Q9NX45 425 aa19.87■□□□□ 0.77
VTI1B-205ENST00000555543 SPHK1Q9NYA1 384 aa19.87■□□□□ 0.77
VTI1B-205ENST00000555543 CIDEBQ9UHD4 219 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 252.6 ms