RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 SLC16A6O15403 523 aa15.38■□□□□ 0.05
SYNE3-203ENST00000554873 USP17L7P0C7H9 530 aa15.38■□□□□ 0.05
SYNE3-203ENST00000554873 EFR3AQ14156 821 aa15.38■□□□□ 0.05
SYNE3-203ENST00000554873 LETMD1Q6P1Q0 360 aa15.38■□□□□ 0.05
SYNE3-203ENST00000554873 ARHGAP36Q6ZRI8 547 aa15.38■□□□□ 0.05
SYNE3-203ENST00000554873 RPS27LQ71UM5 84 aaKnown RBP15.38■□□□□ 0.05
SYNE3-203ENST00000554873 B3GNT8Q7Z7M8 397 aa15.38■□□□□ 0.05
SYNE3-203ENST00000554873 SVOPLQ8N434 492 aa15.38■□□□□ 0.05
SYNE3-203ENST00000554873 EMID1Q96A84 441 aaPredicted RBP15.38■□□□□ 0.05
SYNE3-203ENST00000554873 C19orf60Q96EN9 201 aa15.38■□□□□ 0.05
SYNE3-203ENST00000554873 UGT2B28Q9BY64 529 aa15.38■□□□□ 0.05
SYNE3-203ENST00000554873 TMPRSS11EQ9UL52 423 aa15.38■□□□□ 0.05
SYNE3-203ENST00000554873 LYVE1Q9Y5Y7 322 aa15.38■□□□□ 0.05
SYNE3-203ENST00000554873 LTBP3Q9NS15 1303 aa15.38■□□□□ 0.05
SYNE3-203ENST00000554873 OR2A25A4D2G3 310 aa15.38■□□□□ 0.05
SYNE3-203ENST00000554873 OR6C70A6NIJ9 312 aa15.38■□□□□ 0.05
SYNE3-203ENST00000554873 ADM5C9JUS6 153 aa15.38■□□□□ 0.05
SYNE3-203ENST00000554873 RGS10O43665 173 aa15.38■□□□□ 0.05
SYNE3-203ENST00000554873 MRPS14O60783 128 aaKnown RBP15.38■□□□□ 0.05
SYNE3-203ENST00000554873 MATN4O95460 622 aa15.38■□□□□ 0.05
SYNE3-203ENST00000554873 KCNA5P22460 613 aa15.38■□□□□ 0.05
SYNE3-203ENST00000554873 FMO3P31513 532 aa15.38■□□□□ 0.05
SYNE3-203ENST00000554873 BAG6P46379 1132 aa15.38■□□□□ 0.05
SYNE3-203ENST00000554873 KPNA2P52292 529 aaKnown RBP15.38■□□□□ 0.05
SYNE3-203ENST00000554873 CHRNB3Q05901 458 aa15.38■□□□□ 0.05
SYNE3-203ENST00000554873 FUT11Q495W5 492 aa15.38■□□□□ 0.05
SYNE3-203ENST00000554873 PIK3R6Q5UE93 754 aa15.38■□□□□ 0.05
SYNE3-203ENST00000554873 TOP6BLQ8N6T0 577 aa15.38■□□□□ 0.05
SYNE3-203ENST00000554873 EDEM1Q92611 657 aa15.38■□□□□ 0.05
SYNE3-203ENST00000554873 CCDC126Q96EE4 140 aa15.38■□□□□ 0.05
SYNE3-203ENST00000554873 TKTL2Q9H0I9 626 aa15.38■□□□□ 0.05
SYNE3-203ENST00000554873 WDCPQ9H6R7 721 aa15.38■□□□□ 0.05
SYNE3-203ENST00000554873 AKTIPQ9H8T0 292 aa15.38■□□□□ 0.05
SYNE3-203ENST00000554873 CYP4F12Q9HCS2 524 aa15.38■□□□□ 0.05
SYNE3-203ENST00000554873 USP22Q9UPT9 525 aa15.38■□□□□ 0.05
SYNE3-203ENST00000554873 C9JVG2 144 aa15.37■□□□□ 0.05
SYNE3-203ENST00000554873 BCKDKO14874 412 aa15.37■□□□□ 0.05
SYNE3-203ENST00000554873 CACNG3O60359 315 aa15.37■□□□□ 0.05
SYNE3-203ENST00000554873 KCNE1P15382 129 aa15.37■□□□□ 0.05
SYNE3-203ENST00000554873 DNAJB2P25686 324 aa15.37■□□□□ 0.05
SYNE3-203ENST00000554873 SLC1A2P43004 574 aa15.37■□□□□ 0.05
SYNE3-203ENST00000554873 MAGEA11P43364 429 aa15.37■□□□□ 0.05
SYNE3-203ENST00000554873 CXCR4P61073 352 aa15.37■□□□□ 0.05
SYNE3-203ENST00000554873 TNK1Q13470 666 aa15.37■□□□□ 0.05
SYNE3-203ENST00000554873 FAM219BQ5XKK7 198 aa15.37■□□□□ 0.05
SYNE3-203ENST00000554873 TCTE3Q8IZS6 198 aa15.37■□□□□ 0.05
SYNE3-203ENST00000554873 ZMIZ2Q8NF64 920 aa15.37■□□□□ 0.05
SYNE3-203ENST00000554873 IPMKQ8NFU5 416 aa15.37■□□□□ 0.05
SYNE3-203ENST00000554873 SMOQ99835 787 aa15.37■□□□□ 0.05
SYNE3-203ENST00000554873 TBL1YQ9BQ87 522 aa15.37■□□□□ 0.05
SYNE3-203ENST00000554873 CCNB1IP1Q9NPC3 277 aa15.37■□□□□ 0.05
SYNE3-203ENST00000554873 CRTAC1Q9NQ79 661 aa15.37■□□□□ 0.05
SYNE3-203ENST00000554873 TMEM30AQ9NV96 361 aa15.37■□□□□ 0.05
SYNE3-203ENST00000554873 IL20Q9NYY1 176 aa15.37■□□□□ 0.05
SYNE3-203ENST00000554873 DNAJB9Q9UBS3 223 aa15.37■□□□□ 0.05
SYNE3-203ENST00000554873 MAGEL2Q9UJ55 1249 aa15.37■□□□□ 0.05
SYNE3-203ENST00000554873 TYW5A2RUC4 315 aaKnown RBP15.37■□□□□ 0.05
SYNE3-203ENST00000554873 PSMD3O43242 534 aa15.37■□□□□ 0.05
SYNE3-203ENST00000554873 DARSP14868 501 aaKnown RBP15.37■□□□□ 0.05
SYNE3-203ENST00000554873 MLLT3P42568 568 aaPredicted RBP15.37■□□□□ 0.05
SYNE3-203ENST00000554873 RFX2P48378 723 aa15.37■□□□□ 0.05
SYNE3-203ENST00000554873 CD83Q01151 205 aa15.37■□□□□ 0.05
SYNE3-203ENST00000554873 ZNF792Q3KQV3 632 aa15.37■□□□□ 0.05
SYNE3-203ENST00000554873 XKR4Q5GH76 650 aa15.37■□□□□ 0.05
SYNE3-203ENST00000554873 RAP1GAP2Q684P5 730 aa15.37■□□□□ 0.05
SYNE3-203ENST00000554873 CLEC6AQ6EIG7 209 aa15.37■□□□□ 0.05
SYNE3-203ENST00000554873 CCDC190Q86UF4 302 aa15.37■□□□□ 0.05
SYNE3-203ENST00000554873 KLHDC8BQ8IXV7 354 aa15.37■□□□□ 0.05
SYNE3-203ENST00000554873 ARRDC4Q8NCT1 418 aa15.37■□□□□ 0.05
SYNE3-203ENST00000554873 SETD9Q8NE22 299 aa15.37■□□□□ 0.05
SYNE3-203ENST00000554873 OR10T2Q8NGX3 314 aa15.37■□□□□ 0.05
SYNE3-203ENST00000554873 NPLOC4Q8TAT6 608 aa15.37■□□□□ 0.05
SYNE3-203ENST00000554873 ZNF419Q96HQ0 510 aaPredicted RBP15.37■□□□□ 0.05
SYNE3-203ENST00000554873 C3orf30Q96M34 536 aa15.37■□□□□ 0.05
SYNE3-203ENST00000554873 ITPAQ9BY32 194 aa15.37■□□□□ 0.05
SYNE3-203ENST00000554873 IGSF5Q9NSI5 407 aa15.37■□□□□ 0.05
SYNE3-203ENST00000554873 COQ3Q9NZJ6 369 aa15.37■□□□□ 0.05
SYNE3-203ENST00000554873 PIN4Q9Y237 131 aaKnown RBP15.37■□□□□ 0.05
SYNE3-203ENST00000554873 TRAPPC4Q9Y296 219 aa15.37■□□□□ 0.05
SYNE3-203ENST00000554873 HS6ST1O60243 411 aa15.36■□□□□ 0.05
SYNE3-203ENST00000554873 KPNA6O60684 536 aa15.36■□□□□ 0.05
SYNE3-203ENST00000554873 FTH1P02794 183 aa15.36■□□□□ 0.05
SYNE3-203ENST00000554873 CYP11A1P05108 521 aa15.36■□□□□ 0.05
SYNE3-203ENST00000554873 WEE1P30291 646 aa15.36■□□□□ 0.05
SYNE3-203ENST00000554873 GNPDA1P46926 289 aa15.36■□□□□ 0.05
SYNE3-203ENST00000554873 APLP1P51693 650 aa15.36■□□□□ 0.05
SYNE3-203ENST00000554873 FOXD4Q12950 439 aaPredicted RBP15.36■□□□□ 0.05
SYNE3-203ENST00000554873 CSHL1Q14406 222 aa15.36■□□□□ 0.05
SYNE3-203ENST00000554873 AAK1Q2M2I8 961 aa15.36■□□□□ 0.05
SYNE3-203ENST00000554873 ARMC4Q5T2S8 1044 aa15.36■□□□□ 0.05
SYNE3-203ENST00000554873 RNF135Q8IUD6 432 aa15.36■□□□□ 0.05
SYNE3-203ENST00000554873 OR8H2Q8N162 312 aa15.36■□□□□ 0.05
SYNE3-203ENST00000554873 KBTBD8Q8NFY9 601 aa15.36■□□□□ 0.05
SYNE3-203ENST00000554873 ITFG1Q8TB96 612 aa15.36■□□□□ 0.05
SYNE3-203ENST00000554873 BLOC1S5Q8TDH9 187 aa15.36■□□□□ 0.05
SYNE3-203ENST00000554873 PGAP3Q96FM1 320 aaPredicted RBP15.36■□□□□ 0.05
SYNE3-203ENST00000554873 SLC52A3Q9NQ40 469 aa15.36■□□□□ 0.05
SYNE3-203ENST00000554873 AAR2Q9Y312 384 aaKnown RBP15.36■□□□□ 0.05
SYNE3-203ENST00000554873 PCP4L1A6NKN8 68 aa15.36■□□□□ 0.05
SYNE3-203ENST00000554873 GZMKP49863 264 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms