RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 IL36AQ9UHA7 158 aa11.46□□□□□ -0.58
SHMT2-212ENST00000554467 TMED5Q9Y3A6 229 aa11.46□□□□□ -0.58
SHMT2-212ENST00000554467 RWDD3Q9Y3V2 267 aa11.46□□□□□ -0.58
SHMT2-212ENST00000554467 TMEM202A6NGA9 273 aa11.45□□□□□ -0.58
SHMT2-212ENST00000554467 GIPC1O14908 333 aa11.45□□□□□ -0.58
SHMT2-212ENST00000554467 CAPN1P07384 714 aa11.45□□□□□ -0.58
SHMT2-212ENST00000554467 CISD3P0C7P0 127 aa11.45□□□□□ -0.58
SHMT2-212ENST00000554467 NFKBIAP25963 317 aa11.45□□□□□ -0.58
SHMT2-212ENST00000554467 RGS4P49798 205 aa11.45□□□□□ -0.58
SHMT2-212ENST00000554467 SQLEQ14534 574 aa11.45□□□□□ -0.58
SHMT2-212ENST00000554467 BNC2Q6ZN30 1099 aaPredicted RBP11.45□□□□□ -0.58
SHMT2-212ENST00000554467 TICAM1Q8IUC6 712 aa11.45□□□□□ -0.58
SHMT2-212ENST00000554467 OSCP1Q8WVF1 389 aa11.45□□□□□ -0.58
SHMT2-212ENST00000554467 HTATIP2Q9BUP3 242 aa11.45□□□□□ -0.58
SHMT2-212ENST00000554467 EFCAB1Q9HAE3 211 aa11.45□□□□□ -0.58
SHMT2-212ENST00000554467 ZDHHC3Q9NYG2 299 aa11.45□□□□□ -0.58
SHMT2-212ENST00000554467 C16orf96A6NNT2 1141 aa11.45□□□□□ -0.58
SHMT2-212ENST00000554467 LSM1O15116 133 aaKnown RBP11.45□□□□□ -0.58
SHMT2-212ENST00000554467 LINC01565O15544 149 aa11.45□□□□□ -0.58
SHMT2-212ENST00000554467 DGKAP23743 735 aa11.45□□□□□ -0.58
SHMT2-212ENST00000554467 NSG1P42857 185 aa11.45□□□□□ -0.58
SHMT2-212ENST00000554467 NR1H2P55055 460 aa11.45□□□□□ -0.58
SHMT2-212ENST00000554467 MS4A2Q01362 244 aa11.45□□□□□ -0.58
SHMT2-212ENST00000554467 NRF1Q16656 503 aa11.45□□□□□ -0.58
SHMT2-212ENST00000554467 GPR33Q49SQ1 333 aa11.45□□□□□ -0.58
SHMT2-212ENST00000554467 FNDC3BQ53EP0 1204 aaKnown RBP11.45□□□□□ -0.58
SHMT2-212ENST00000554467 REP15Q6BDI9 236 aa11.45□□□□□ -0.58
SHMT2-212ENST00000554467 CYP2R1Q6VVX0 501 aa11.45□□□□□ -0.58
SHMT2-212ENST00000554467 ADAMTSL2Q86TH1 951 aa11.45□□□□□ -0.58
SHMT2-212ENST00000554467 LILRA3Q8N6C8 439 aaPredicted RBP11.45□□□□□ -0.58
SHMT2-212ENST00000554467 OR56A4Q8NGH8 313 aa11.45□□□□□ -0.58
SHMT2-212ENST00000554467 METTL6Q8TCB7 284 aa11.45□□□□□ -0.58
SHMT2-212ENST00000554467 PYCR2Q96C36 320 aa11.45□□□□□ -0.58
SHMT2-212ENST00000554467 MTFMTQ96DP5 389 aaKnown RBP11.45□□□□□ -0.58
SHMT2-212ENST00000554467 FAM126AQ9BYI3 521 aaPredicted RBP11.45□□□□□ -0.58
SHMT2-212ENST00000554467 OSBPL6Q9BZF3 934 aa11.45□□□□□ -0.58
SHMT2-212ENST00000554467 IPPKQ9H8X2 491 aa11.45□□□□□ -0.58
SHMT2-212ENST00000554467 PLGRKTQ9HBL7 147 aa11.45□□□□□ -0.58
SHMT2-212ENST00000554467 WWOXQ9NZC7 414 aa11.45□□□□□ -0.58
SHMT2-212ENST00000554467 HEPACAM2A8MVW5 462 aa11.45□□□□□ -0.58
SHMT2-212ENST00000554467 FADS2P1A8MWK0 482 aa11.45□□□□□ -0.58
SHMT2-212ENST00000554467 E7ENX8 843 aa11.45□□□□□ -0.58
SHMT2-212ENST00000554467 OR7A17O14581 309 aa11.45□□□□□ -0.58
SHMT2-212ENST00000554467 STX16O14662 325 aa11.45□□□□□ -0.58
SHMT2-212ENST00000554467 KLK8O60259 260 aa11.45□□□□□ -0.58
SHMT2-212ENST00000554467 ESRRBO95718 433 aa11.45□□□□□ -0.58
SHMT2-212ENST00000554467 OXSR1O95747 527 aaPredicted RBP11.45□□□□□ -0.58
SHMT2-212ENST00000554467 S100BP04271 92 aaPredicted RBP11.45□□□□□ -0.58
SHMT2-212ENST00000554467 FGF4P08620 206 aa11.45□□□□□ -0.58
SHMT2-212ENST00000554467 RPS3P23396 243 aaKnown RBP eCLIP11.45□□□□□ -0.584e-7■■■□□ 17.6
SHMT2-212ENST00000554467 CDK9P50750 372 aaKnown RBP11.45□□□□□ -0.58
SHMT2-212ENST00000554467 STX1BP61266 288 aa11.45□□□□□ -0.58
SHMT2-212ENST00000554467 GTF2H2Q13888 395 aa11.45□□□□□ -0.58
SHMT2-212ENST00000554467 RPS6KA2Q15349 733 aa11.45□□□□□ -0.58
SHMT2-212ENST00000554467 GTF2H2CQ6P1K8 395 aa11.45□□□□□ -0.58
SHMT2-212ENST00000554467 PARS2Q7L3T8 475 aaKnown RBP11.45□□□□□ -0.58
SHMT2-212ENST00000554467 PHYKPLQ8IUZ5 450 aa11.45□□□□□ -0.58
SHMT2-212ENST00000554467 SLC7A5P1Q8MH63 180 aa11.45□□□□□ -0.58
SHMT2-212ENST00000554467 LILRA2Q8N149 483 aa11.45□□□□□ -0.58
SHMT2-212ENST00000554467 OR4F6Q8NGB9 312 aa11.45□□□□□ -0.58
SHMT2-212ENST00000554467 VPS33AQ96AX1 596 aa11.45□□□□□ -0.58
SHMT2-212ENST00000554467 DHRS1Q96LJ7 313 aa11.45□□□□□ -0.58
SHMT2-212ENST00000554467 NKX2-4Q9H2Z4 354 aa11.45□□□□□ -0.58
SHMT2-212ENST00000554467 FAM83DQ9H4H8 585 aa11.45□□□□□ -0.58
SHMT2-212ENST00000554467 FARSBQ9NSD9 589 aaKnown RBP11.45□□□□□ -0.58
SHMT2-212ENST00000554467 CACNA2D2Q9NY47 1150 aa11.45□□□□□ -0.58
SHMT2-212ENST00000554467 PLXNB3Q9ULL4 1909 aa11.45□□□□□ -0.58
SHMT2-212ENST00000554467 PBLDP30039 288 aaPredicted RBP11.44□□□□□ -0.58
SHMT2-212ENST00000554467 CASP2P42575 452 aa11.44□□□□□ -0.58
SHMT2-212ENST00000554467 WASP42768 502 aa11.44□□□□□ -0.58
SHMT2-212ENST00000554467 POLR2LP62875 67 aaKnown RBP11.44□□□□□ -0.58
SHMT2-212ENST00000554467 ACOX1Q15067 660 aa11.44□□□□□ -0.58
SHMT2-212ENST00000554467 TANGO2Q6ICL3 276 aa11.44□□□□□ -0.58
SHMT2-212ENST00000554467 IL27RAQ6UWB1 636 aa11.44□□□□□ -0.58
SHMT2-212ENST00000554467 C16orf89Q6UX73 402 aa11.44□□□□□ -0.58
SHMT2-212ENST00000554467 MACC1Q6ZN28 852 aa11.44□□□□□ -0.58
SHMT2-212ENST00000554467 DCDC5Q6ZRR9 648 aa11.44□□□□□ -0.58
SHMT2-212ENST00000554467 RETREG3Q86VR2 466 aa11.44□□□□□ -0.58
SHMT2-212ENST00000554467 CROCCP3Q8IVE0 287 aa11.44□□□□□ -0.58
SHMT2-212ENST00000554467 CBARPQ8N350 705 aaPredicted RBP11.44□□□□□ -0.58
SHMT2-212ENST00000554467 LEMD2Q8NC56 503 aa11.44□□□□□ -0.58
SHMT2-212ENST00000554467 COX4I2Q96KJ9 171 aa11.44□□□□□ -0.58
SHMT2-212ENST00000554467 ASB16Q96NS5 453 aa11.44□□□□□ -0.58
SHMT2-212ENST00000554467 SLC2A11Q9BYW1 496 aa11.44□□□□□ -0.58
SHMT2-212ENST00000554467 PCDHAC1Q9H158 963 aa11.44□□□□□ -0.58
SHMT2-212ENST00000554467 EBF1Q9UH73 591 aa11.44□□□□□ -0.58
SHMT2-212ENST00000554467 RNF11Q9Y3C5 154 aa11.44□□□□□ -0.58
SHMT2-212ENST00000554467 UPK3BL1B0FP48 263 aa11.44□□□□□ -0.58
SHMT2-212ENST00000554467 UPK3BL2E5RIL1 263 aa11.44□□□□□ -0.58
SHMT2-212ENST00000554467 RAD51BO15315 384 aa11.44□□□□□ -0.58
SHMT2-212ENST00000554467 CBFA2T3O75081 653 aa11.44□□□□□ -0.58
SHMT2-212ENST00000554467 RB1P06400 928 aa11.44□□□□□ -0.58
SHMT2-212ENST00000554467 SNRPB2P08579 225 aaKnown RBP11.44□□□□□ -0.58
SHMT2-212ENST00000554467 GPX3P22352 226 aa11.44□□□□□ -0.58
SHMT2-212ENST00000554467 ST8SIA6P61647 398 aa11.44□□□□□ -0.58
SHMT2-212ENST00000554467 PLIN5Q00G26 463 aa11.44□□□□□ -0.58
SHMT2-212ENST00000554467 CAPRIN1Q14444 709 aaKnown RBP11.44□□□□□ -0.58
SHMT2-212ENST00000554467 NANOGP8Q6NSW7 305 aa11.44□□□□□ -0.58
SHMT2-212ENST00000554467 BPIFB1Q8TDL5 484 aa11.44□□□□□ -0.58
SHMT2-212ENST00000554467 GFM2Q969S9 779 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms