RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 PCDHGA7Q9Y5G6 932 aa17.98■□□□□ 0.47
PRPF40B-216ENST00000552301 MRFAP1Q9Y605 127 aa17.98■□□□□ 0.47
PRPF40B-216ENST00000552301 TEX264Q9Y6I9 313 aa17.98■□□□□ 0.47
PRPF40B-216ENST00000552301 GSAPA4D1B5 854 aa17.97■□□□□ 0.47
PRPF40B-216ENST00000552301 SRRM3A6NNA2 597 aaPredicted RBP17.97■□□□□ 0.47
PRPF40B-216ENST00000552301 CDRT15L2A8MXV6 281 aa17.97■□□□□ 0.47
PRPF40B-216ENST00000552301 TAF4O00268 1085 aa17.97■□□□□ 0.47
PRPF40B-216ENST00000552301 MATN2O00339 956 aa17.97■□□□□ 0.47
PRPF40B-216ENST00000552301 KRT37O76014 449 aa17.97■□□□□ 0.47
PRPF40B-216ENST00000552301 CCL4P13236 92 aa17.97■□□□□ 0.47
PRPF40B-216ENST00000552301 ETV5P41161 510 aa17.97■□□□□ 0.47
PRPF40B-216ENST00000552301 ARL4DP49703 201 aa17.97■□□□□ 0.47
PRPF40B-216ENST00000552301 SEPHS1P49903 392 aa17.97■□□□□ 0.47
PRPF40B-216ENST00000552301 CAV1Q03135 178 aa17.97■□□□□ 0.47
PRPF40B-216ENST00000552301 ABRQ12979 859 aa17.97■□□□□ 0.47
PRPF40B-216ENST00000552301 TTLL9Q3SXZ7 439 aa17.97■□□□□ 0.47
PRPF40B-216ENST00000552301 ZNF789Q5FWF6 425 aa17.97■□□□□ 0.47
PRPF40B-216ENST00000552301 TTC23LQ6PF05 361 aa17.97■□□□□ 0.47
PRPF40B-216ENST00000552301 UNC5DQ6UXZ4 953 aa17.97■□□□□ 0.47
PRPF40B-216ENST00000552301 PRSS42Q7Z5A4 293 aa17.97■□□□□ 0.47
PRPF40B-216ENST00000552301 ZBED8Q8IZ13 594 aa17.97■□□□□ 0.47
PRPF40B-216ENST00000552301 ZBTB2Q8N680 514 aa17.97■□□□□ 0.47
PRPF40B-216ENST00000552301 ZNF248Q8NDW4 579 aa17.97■□□□□ 0.47
PRPF40B-216ENST00000552301 FBXO36Q8NEA4 188 aa17.97■□□□□ 0.47
PRPF40B-216ENST00000552301 OR5K2Q8NHB8 316 aa17.97■□□□□ 0.47
PRPF40B-216ENST00000552301 UBXN4Q92575 508 aa17.97■□□□□ 0.47
PRPF40B-216ENST00000552301 USP7Q93009 1102 aa17.97■□□□□ 0.47
PRPF40B-216ENST00000552301 TFB2MQ9H5Q4 396 aaKnown RBP17.97■□□□□ 0.47
PRPF40B-216ENST00000552301 SLC39A1Q9NY26 324 aa17.97■□□□□ 0.47
PRPF40B-216ENST00000552301 COMMD10Q9Y6G5 202 aa17.97■□□□□ 0.47
PRPF40B-216ENST00000552301 CTAGE15A4D2H0 777 aa17.96■□□□□ 0.47
PRPF40B-216ENST00000552301 TLCD2A6NGC4 264 aa17.96■□□□□ 0.47
PRPF40B-216ENST00000552301 B4E171 279 aa17.96■□□□□ 0.47
PRPF40B-216ENST00000552301 SLCO2B1O94956 709 aa17.96■□□□□ 0.47
PRPF40B-216ENST00000552301 F7P08709 466 aaPredicted RBP17.96■□□□□ 0.47
PRPF40B-216ENST00000552301 CTAGE8P0CG41 777 aa17.96■□□□□ 0.47
PRPF40B-216ENST00000552301 POLR2CP19387 275 aaPredicted RBP17.96■□□□□ 0.47
PRPF40B-216ENST00000552301 SLC5A2P31639 672 aa17.96■□□□□ 0.47
PRPF40B-216ENST00000552301 SHMT2P34897 504 aa17.96■□□□□ 0.47
PRPF40B-216ENST00000552301 TSPAN7P41732 249 aa17.96■□□□□ 0.47
PRPF40B-216ENST00000552301 CARSP49589 748 aaKnown RBP17.96■□□□□ 0.47
PRPF40B-216ENST00000552301 PLTPP55058 493 aa17.96■□□□□ 0.47
PRPF40B-216ENST00000552301 RAB15P59190 212 aa17.96■□□□□ 0.47
PRPF40B-216ENST00000552301 STEAP4Q687X5 459 aa17.96■□□□□ 0.47
PRPF40B-216ENST00000552301 KIAA0408Q6ZU52 694 aa17.96■□□□□ 0.47
PRPF40B-216ENST00000552301 CTAGE6Q86UF2 777 aa17.96■□□□□ 0.47
PRPF40B-216ENST00000552301 AMIGO1Q86WK6 493 aa17.96■□□□□ 0.47
PRPF40B-216ENST00000552301 VRK3Q8IV63 474 aa17.96■□□□□ 0.47
PRPF40B-216ENST00000552301 DCUN1D3Q8IWE4 304 aa17.96■□□□□ 0.47
PRPF40B-216ENST00000552301 CTAGE4Q8IX94 777 aa17.96■□□□□ 0.47
PRPF40B-216ENST00000552301 C2CD4AQ8NCU7 369 aaPredicted RBP17.96■□□□□ 0.47
PRPF40B-216ENST00000552301 PYROXD1Q8WU10 500 aa17.96■□□□□ 0.47
PRPF40B-216ENST00000552301 KCNE4Q8WWG9 221 aa17.96■□□□□ 0.47
PRPF40B-216ENST00000552301 ART4Q93070 314 aa17.96■□□□□ 0.47
PRPF40B-216ENST00000552301 TAAR9Q96RI9 348 aa17.96■□□□□ 0.47
PRPF40B-216ENST00000552301 ZNF768Q9H5H4 540 aaKnown RBP17.96■□□□□ 0.47
PRPF40B-216ENST00000552301 WDR70Q9NW82 654 aa17.96■□□□□ 0.47
PRPF40B-216ENST00000552301 OCIAD1Q9NX40 245 aa17.96■□□□□ 0.47
PRPF40B-216ENST00000552301 TSR3Q9UJK0 312 aaKnown RBP17.96■□□□□ 0.47
PRPF40B-216ENST00000552301 CDYLQ9Y232 598 aa17.96■□□□□ 0.47
PRPF40B-216ENST00000552301 USP24Q9UPU5 2620 aa17.96■□□□□ 0.47
PRPF40B-216ENST00000552301 FRYQ5TBA9 3013 aa17.95■□□□□ 0.46
PRPF40B-216ENST00000552301 E7ESA3 106 aa17.95■□□□□ 0.46
PRPF40B-216ENST00000552301 TP73O15350 636 aa17.95■□□□□ 0.46
PRPF40B-216ENST00000552301 EIF3HO15372 352 aaKnown RBP eCLIP17.95■□□□□ 0.46
PRPF40B-216ENST00000552301 NVLO15381 856 aaKnown RBP17.95■□□□□ 0.46
PRPF40B-216ENST00000552301 KIF1CO43896 1103 aaKnown RBP17.95■□□□□ 0.46
PRPF40B-216ENST00000552301 VPS26AO75436 327 aa17.95■□□□□ 0.46
PRPF40B-216ENST00000552301 FGF3P11487 239 aaPredicted RBP17.95■□□□□ 0.46
PRPF40B-216ENST00000552301 PPP1CAP62136 330 aa17.95■□□□□ 0.46
PRPF40B-216ENST00000552301 CNTN4Q8IWV2 1026 aa17.95■□□□□ 0.46
PRPF40B-216ENST00000552301 KCNJ9Q92806 393 aa17.95■□□□□ 0.46
PRPF40B-216ENST00000552301 NAF1Q96HR8 494 aaKnown RBP17.95■□□□□ 0.46
PRPF40B-216ENST00000552301 XKR8Q9H6D3 395 aa17.95■□□□□ 0.46
PRPF40B-216ENST00000552301 SAYSD1Q9NPB0 183 aa17.95■□□□□ 0.46
PRPF40B-216ENST00000552301 GRHL1Q9NZI5 618 aa17.95■□□□□ 0.46
PRPF40B-216ENST00000552301 PCDHB11Q9Y5F2 797 aa17.95■□□□□ 0.46
PRPF40B-216ENST00000552301 ASPMQ8IZT6 3477 aa17.95■□□□□ 0.46
PRPF40B-216ENST00000552301 PRAMEF10O60809 474 aa17.94■□□□□ 0.46
PRPF40B-216ENST00000552301 HAUS5O94927 633 aa17.94■□□□□ 0.46
PRPF40B-216ENST00000552301 CDH3P22223 829 aa17.94■□□□□ 0.46
PRPF40B-216ENST00000552301 CD82P27701 267 aa17.94■□□□□ 0.46
PRPF40B-216ENST00000552301 ATP5DP30049 168 aa17.94■□□□□ 0.46
PRPF40B-216ENST00000552301 EIF2S3P41091 472 aaKnown RBP17.94■□□□□ 0.46
PRPF40B-216ENST00000552301 SLC7A5Q01650 507 aa17.94■□□□□ 0.46
PRPF40B-216ENST00000552301 FOXM1Q08050 763 aa17.94■□□□□ 0.46
PRPF40B-216ENST00000552301 FASTKD3Q14CZ7 662 aaKnown RBP17.94■□□□□ 0.46
PRPF40B-216ENST00000552301 DCAF12Q5T6F0 453 aa17.94■□□□□ 0.46
PRPF40B-216ENST00000552301 CYB5D1Q6P9G0 228 aa17.94■□□□□ 0.46
PRPF40B-216ENST00000552301 CNSTQ6PJW8 725 aa17.94■□□□□ 0.46
PRPF40B-216ENST00000552301 CCDC25Q86WR0 208 aa17.94■□□□□ 0.46
PRPF40B-216ENST00000552301 PALM2Q8IXS6 379 aa17.94■□□□□ 0.46
PRPF40B-216ENST00000552301 RAB42Q8N4Z0 105 aa17.94■□□□□ 0.46
PRPF40B-216ENST00000552301 TEFMQ96QE5 360 aaKnown RBP17.94■□□□□ 0.46
PRPF40B-216ENST00000552301 MAP3K3Q99759 626 aa17.94■□□□□ 0.46
PRPF40B-216ENST00000552301 WDR83Q9BRX9 315 aaKnown RBP17.94■□□□□ 0.46
PRPF40B-216ENST00000552301 DDA1Q9BW61 102 aa17.94■□□□□ 0.46
PRPF40B-216ENST00000552301 ASPSCR1Q9BZE9 553 aa17.94■□□□□ 0.46
PRPF40B-216ENST00000552301 B3GNT4Q9C0J1 378 aa17.94■□□□□ 0.46
PRPF40B-216ENST00000552301 ZFATQ9P243 1243 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms