RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 RPL38P63173 70 aaKnown RBP7.99□□□□□ -1.13
CHPT1-208ENST00000552215 LEXMQ3ZCV2 418 aa7.99□□□□□ -1.13
CHPT1-208ENST00000552215 CENPLQ8N0S6 344 aaPredicted RBP7.99□□□□□ -1.13
CHPT1-208ENST00000552215 OR2T34Q8NGX1 318 aa7.99□□□□□ -1.13
CHPT1-208ENST00000552215 TLCD1Q96CP7 247 aa7.99□□□□□ -1.13
CHPT1-208ENST00000552215 APOLD1Q96LR9 279 aa7.99□□□□□ -1.13
CHPT1-208ENST00000552215 RBCK1Q9BYM8 510 aa7.99□□□□□ -1.13
CHPT1-208ENST00000552215 PPCSQ9HAB8 311 aa7.99□□□□□ -1.13
CHPT1-208ENST00000552215 ARNT2Q9HBZ2 717 aa7.99□□□□□ -1.13
CHPT1-208ENST00000552215 INTS10Q9NVR2 710 aaKnown RBP7.99□□□□□ -1.13
CHPT1-208ENST00000552215 TRIM33Q9UPN9 1127 aa7.99□□□□□ -1.13
CHPT1-208ENST00000552215 A0A1W2PQF6 199 aa7.99□□□□□ -1.13
CHPT1-208ENST00000552215 NTRK1P04629 796 aa7.99□□□□□ -1.13
CHPT1-208ENST00000552215 YBX1P67809 324 aaKnown RBP7.99□□□□□ -1.13
CHPT1-208ENST00000552215 ARHGAP8P85298 464 aa7.99□□□□□ -1.13
CHPT1-208ENST00000552215 CLCQ05315 142 aa7.99□□□□□ -1.13
CHPT1-208ENST00000552215 GAS6Q14393 721 aa7.99□□□□□ -1.13
CHPT1-208ENST00000552215 C5orf22Q49AR2 442 aa7.99□□□□□ -1.13
CHPT1-208ENST00000552215 LIPMQ5VYY2 423 aa7.99□□□□□ -1.13
CHPT1-208ENST00000552215 TCEAL6Q6IPX3 200 aa7.99□□□□□ -1.13
CHPT1-208ENST00000552215 TMEM207Q6UWW9 146 aa7.99□□□□□ -1.13
CHPT1-208ENST00000552215 SLC22A15Q8IZD6 547 aa7.99□□□□□ -1.13
CHPT1-208ENST00000552215 OR56A4Q8NGH8 313 aa7.99□□□□□ -1.13
CHPT1-208ENST00000552215 TCEAL3Q969E4 200 aa7.99□□□□□ -1.13
CHPT1-208ENST00000552215 THAP1Q9NVV9 213 aa7.99□□□□□ -1.13
CHPT1-208ENST00000552215 KCNE2Q9Y6J6 123 aa7.99□□□□□ -1.13
CHPT1-208ENST00000552215 SLCO1B1Q9Y6L6 691 aa7.99□□□□□ -1.13
CHPT1-208ENST00000552215 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.99□□□□□ -1.13
CHPT1-208ENST00000552215 APC2O95996 2303 aa7.99□□□□□ -1.13
CHPT1-208ENST00000552215 TNFP01375 233 aa7.99□□□□□ -1.13
CHPT1-208ENST00000552215 VARSP26640 1264 aaKnown RBP7.99□□□□□ -1.13
CHPT1-208ENST00000552215 PTGER1P34995 402 aa7.99□□□□□ -1.13
CHPT1-208ENST00000552215 SOAT1P35610 550 aa7.99□□□□□ -1.13
CHPT1-208ENST00000552215 MAZP56270 477 aaKnown RBP7.99□□□□□ -1.13
CHPT1-208ENST00000552215 RAB8AP61006 207 aa7.99□□□□□ -1.13
CHPT1-208ENST00000552215 KCNC3Q14003 757 aa7.99□□□□□ -1.13
CHPT1-208ENST00000552215 HIST2H2ACQ16777 129 aaPredicted RBP7.99□□□□□ -1.13
CHPT1-208ENST00000552215 HIST2H2AA3Q6FI13 130 aa7.99□□□□□ -1.13
CHPT1-208ENST00000552215 TMEM184AQ6ZMB5 413 aa7.99□□□□□ -1.13
CHPT1-208ENST00000552215 GPRIN3Q6ZVF9 776 aa7.99□□□□□ -1.13
CHPT1-208ENST00000552215 CD200R1Q8TD46 325 aa7.99□□□□□ -1.13
CHPT1-208ENST00000552215 OR1E3Q8WZA6 343 aa7.99□□□□□ -1.13
CHPT1-208ENST00000552215 OR2M4Q96R27 311 aa7.99□□□□□ -1.13
CHPT1-208ENST00000552215 NELL2Q99435 816 aa7.99□□□□□ -1.13
CHPT1-208ENST00000552215 RSPH9Q9H1X1 276 aaPredicted RBP7.99□□□□□ -1.13
CHPT1-208ENST00000552215 STARD5Q9NSY2 213 aa7.99□□□□□ -1.13
CHPT1-208ENST00000552215 ZFR2Q9UPR6 939 aaKnown RBP7.99□□□□□ -1.13
CHPT1-208ENST00000552215 RNF11Q9Y3C5 154 aa7.99□□□□□ -1.13
CHPT1-208ENST00000552215 TRANK1O15050 2925 aa7.99□□□□□ -1.13
CHPT1-208ENST00000552215 PDCD11Q14690 1871 aaKnown RBP7.98□□□□□ -1.13
CHPT1-208ENST00000552215 RP1P56715 2156 aa7.98□□□□□ -1.13
CHPT1-208ENST00000552215 LOC730098B7Z3J9 87 aa7.98□□□□□ -1.13
CHPT1-208ENST00000552215 ULK1O75385 1050 aa7.98□□□□□ -1.13
CHPT1-208ENST00000552215 PAPSS2O95340 614 aaPredicted RBP7.98□□□□□ -1.13
CHPT1-208ENST00000552215 PROCP04070 461 aa7.98□□□□□ -1.13
CHPT1-208ENST00000552215 CELA2BP08218 269 aaPredicted RBP7.98□□□□□ -1.13
CHPT1-208ENST00000552215 CHRNB1P11230 501 aa7.98□□□□□ -1.13
CHPT1-208ENST00000552215 HGFP14210 728 aa7.98□□□□□ -1.13
CHPT1-208ENST00000552215 TSHRP16473 764 aa7.98□□□□□ -1.13
CHPT1-208ENST00000552215 PRKAG1P54619 331 aa7.98□□□□□ -1.13
CHPT1-208ENST00000552215 HNRNPH2P55795 449 aaKnown RBP7.98□□□□□ -1.13
CHPT1-208ENST00000552215 XIAPP98170 497 aa7.98□□□□□ -1.13
CHPT1-208ENST00000552215 FAM92BQ6ZTR7 304 aa7.98□□□□□ -1.13
CHPT1-208ENST00000552215 COG4Q9H9E3 785 aa7.98□□□□□ -1.13
CHPT1-208ENST00000552215 SGK2Q9HBY8 427 aa7.98□□□□□ -1.13
CHPT1-208ENST00000552215 TCF7L2Q9NQB0 619 aa7.98□□□□□ -1.13
CHPT1-208ENST00000552215 RAD18Q9NS91 495 aa7.98□□□□□ -1.13
CHPT1-208ENST00000552215 ZDHHC2Q9UIJ5 367 aa7.98□□□□□ -1.13
CHPT1-208ENST00000552215 TRAF6Q9Y4K3 522 aa7.98□□□□□ -1.13
CHPT1-208ENST00000552215 SNX8Q9Y5X2 465 aa7.98□□□□□ -1.13
CHPT1-208ENST00000552215 NUP214P35658 2090 aaPredicted RBP7.98□□□□□ -1.13
CHPT1-208ENST00000552215 WDFY4Q6ZS81 3184 aa7.98□□□□□ -1.13
CHPT1-208ENST00000552215 ANKDD1BA6NHY2 528 aa7.98□□□□□ -1.13
CHPT1-208ENST00000552215 ERAL1O75616 437 aaKnown RBP7.98□□□□□ -1.13
CHPT1-208ENST00000552215 STAMBPO95630 424 aa7.98□□□□□ -1.13
CHPT1-208ENST00000552215 GRK3P35626 688 aa7.98□□□□□ -1.13
CHPT1-208ENST00000552215 RPL14P50914 215 aaKnown RBP7.98□□□□□ -1.13
CHPT1-208ENST00000552215 LYPLAL1Q5VWZ2 237 aa7.98□□□□□ -1.13
CHPT1-208ENST00000552215 NKAIN2Q5VXU1 208 aa7.98□□□□□ -1.13
CHPT1-208ENST00000552215 FUBP1Q96AE4 644 aaKnown RBP7.98□□□□□ -1.13
CHPT1-208ENST00000552215 RAB7BQ96AH8 199 aa7.98□□□□□ -1.13
CHPT1-208ENST00000552215 TRIT1Q9H3H1 467 aaKnown RBP7.98□□□□□ -1.13
CHPT1-208ENST00000552215 ZNF180Q9UJW8 692 aa7.98□□□□□ -1.13
CHPT1-208ENST00000552215 DUSP12Q9UNI6 340 aa7.98□□□□□ -1.13
CHPT1-208ENST00000552215 ANKRD6Q9Y2G4 727 aa7.98□□□□□ -1.13
CHPT1-208ENST00000552215 DHRS7Q9Y394 339 aa7.98□□□□□ -1.13
CHPT1-208ENST00000552215 POLR3HQ9Y535 204 aaPredicted RBP7.98□□□□□ -1.13
CHPT1-208ENST00000552215 OR6C74A6NCV1 312 aa7.98□□□□□ -1.13
CHPT1-208ENST00000552215 GLOD5A6NK44 160 aa7.98□□□□□ -1.13
CHPT1-208ENST00000552215 RTCAO00442 366 aaKnown RBP7.98□□□□□ -1.13
CHPT1-208ENST00000552215 H2AFYO75367 372 aaKnown RBP7.98□□□□□ -1.13
CHPT1-208ENST00000552215 FAM107AO95990 144 aa7.98□□□□□ -1.13
CHPT1-208ENST00000552215 MAGEA3P43357 314 aa7.98□□□□□ -1.13
CHPT1-208ENST00000552215 SRP54P61011 504 aaKnown RBP7.98□□□□□ -1.13
CHPT1-208ENST00000552215 BNIP3Q12983 259 aa7.98□□□□□ -1.13
CHPT1-208ENST00000552215 GTF2H2Q13888 395 aa7.98□□□□□ -1.13
CHPT1-208ENST00000552215 CAPRIN1Q14444 709 aaKnown RBP7.98□□□□□ -1.13
CHPT1-208ENST00000552215 PDK4Q16654 411 aa7.98□□□□□ -1.13
CHPT1-208ENST00000552215 GAB4Q2WGN9 574 aa7.98□□□□□ -1.13
CHPT1-208ENST00000552215 TRIM61Q5EBN2 209 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms