RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 CDKL2Q92772 493 aa10.35□□□□□ -0.75
PTCH1-225ENST00000551845 ZDHHC12Q96GR4 267 aa10.35□□□□□ -0.75
PTCH1-225ENST00000551845 FOPNLQ96NB1 174 aa10.35□□□□□ -0.75
PTCH1-225ENST00000551845 NUDT22Q9BRQ3 303 aa10.35□□□□□ -0.75
PTCH1-225ENST00000551845 FAM129AQ9BZQ8 928 aa10.35□□□□□ -0.75
PTCH1-225ENST00000551845 PHACTR1Q9C0D0 580 aa10.35□□□□□ -0.75
PTCH1-225ENST00000551845 TRIT1Q9H3H1 467 aaKnown RBP10.35□□□□□ -0.75
PTCH1-225ENST00000551845 SEMA6CQ9H3T2 930 aa10.35□□□□□ -0.75
PTCH1-225ENST00000551845 TFB2MQ9H5Q4 396 aaKnown RBP10.35□□□□□ -0.75
PTCH1-225ENST00000551845 KIR3DX1Q9H7L2 352 aa10.35□□□□□ -0.75
PTCH1-225ENST00000551845 HRASLS2Q9NWW9 162 aa10.35□□□□□ -0.75
PTCH1-225ENST00000551845 ZFATQ9P243 1243 aa10.35□□□□□ -0.75
PTCH1-225ENST00000551845 PDP2Q9P2J9 529 aa10.35□□□□□ -0.75
PTCH1-225ENST00000551845 KLHL42Q9P2K6 505 aa10.35□□□□□ -0.75
PTCH1-225ENST00000551845 MTRF1LQ9UGC7 380 aaKnown RBP10.35□□□□□ -0.75
PTCH1-225ENST00000551845 SLC24A2Q9UI40 661 aa10.35□□□□□ -0.75
PTCH1-225ENST00000551845 CCDC187A0A096LP49 1063 aa10.34□□□□□ -0.75
PTCH1-225ENST00000551845 A8MU76 341 aa10.34□□□□□ -0.75
PTCH1-225ENST00000551845 J3QKU1 62 aa10.34□□□□□ -0.75
PTCH1-225ENST00000551845 HGSO14964 777 aaPredicted RBP10.34□□□□□ -0.75
PTCH1-225ENST00000551845 CAPN5O15484 640 aaPredicted RBP10.34□□□□□ -0.75
PTCH1-225ENST00000551845 ZNF500O60304 480 aaPredicted RBP10.34□□□□□ -0.75
PTCH1-225ENST00000551845 NIPSNAP2O75323 286 aa10.34□□□□□ -0.75
PTCH1-225ENST00000551845 RPN2P04844 631 aa10.34□□□□□ -0.75
PTCH1-225ENST00000551845 ITPKBP27987 946 aa10.34□□□□□ -0.75
PTCH1-225ENST00000551845 RBMS1P29558 406 aaKnown RBP10.34□□□□□ -0.75
PTCH1-225ENST00000551845 SSTR1P30872 391 aa10.34□□□□□ -0.75
PTCH1-225ENST00000551845 CSTF2P33240 577 aaKnown RBP eCLIP10.34□□□□□ -0.75
PTCH1-225ENST00000551845 MAGEA4P43358 317 aa10.34□□□□□ -0.75
PTCH1-225ENST00000551845 MPP1Q00013 466 aa10.34□□□□□ -0.75
PTCH1-225ENST00000551845 PRKAA1Q13131 559 aa10.34□□□□□ -0.75
PTCH1-225ENST00000551845 PRKG2Q13237 762 aa10.34□□□□□ -0.75
PTCH1-225ENST00000551845 FASTKD3Q14CZ7 662 aaKnown RBP10.34□□□□□ -0.75
PTCH1-225ENST00000551845 TTLL9Q3SXZ7 439 aa10.34□□□□□ -0.75
PTCH1-225ENST00000551845 SNAP47Q5SQN1 464 aa10.34□□□□□ -0.75
PTCH1-225ENST00000551845 DUS1LQ6P1R4 473 aaKnown RBP10.34□□□□□ -0.75
PTCH1-225ENST00000551845 TRMT10BQ6PF06 316 aaKnown RBP10.34□□□□□ -0.75
PTCH1-225ENST00000551845 FOXR1Q6PIV2 292 aa10.34□□□□□ -0.75
PTCH1-225ENST00000551845 RAB11FIP2Q7L804 512 aa10.34□□□□□ -0.75
PTCH1-225ENST00000551845 TMPRSS9Q7Z410 1059 aa10.34□□□□□ -0.75
PTCH1-225ENST00000551845 B3GNT8Q7Z7M8 397 aa10.34□□□□□ -0.75
PTCH1-225ENST00000551845 GALNT7Q86SF2 657 aa10.34□□□□□ -0.75
PTCH1-225ENST00000551845 SLITRK4Q8IW52 837 aa10.34□□□□□ -0.75
PTCH1-225ENST00000551845 IFT20Q8IY31 132 aa10.34□□□□□ -0.75
PTCH1-225ENST00000551845 ZNF843Q8N446 348 aa10.34□□□□□ -0.75
PTCH1-225ENST00000551845 ZBTB2Q8N680 514 aa10.34□□□□□ -0.75
PTCH1-225ENST00000551845 CFAP61Q8NHU2 1237 aa10.34□□□□□ -0.75
PTCH1-225ENST00000551845 LKAAEAR1Q8TD35 194 aa10.34□□□□□ -0.75
PTCH1-225ENST00000551845 MAGEC3Q8TD91 643 aa10.34□□□□□ -0.75
PTCH1-225ENST00000551845 LCN9Q8WX39 176 aa10.34□□□□□ -0.75
PTCH1-225ENST00000551845 KCNJ9Q92806 393 aa10.34□□□□□ -0.75
PTCH1-225ENST00000551845 INPP5DQ92835 1189 aa10.34□□□□□ -0.75
PTCH1-225ENST00000551845 LIN37Q96GY3 246 aaPredicted RBP10.34□□□□□ -0.75
PTCH1-225ENST00000551845 WDR83Q9BRX9 315 aaKnown RBP10.34□□□□□ -0.75
PTCH1-225ENST00000551845 RAB33BQ9H082 229 aa10.34□□□□□ -0.75
PTCH1-225ENST00000551845 SRMSQ9H3Y6 488 aa10.34□□□□□ -0.75
PTCH1-225ENST00000551845 POLR1BQ9H9Y6 1135 aa10.34□□□□□ -0.75
PTCH1-225ENST00000551845 PLAC1Q9HBJ0 212 aa10.34□□□□□ -0.75
PTCH1-225ENST00000551845 NSMCE4AQ9NXX6 385 aa10.34□□□□□ -0.75
PTCH1-225ENST00000551845 EPHA6Q9UF33 1036 aa10.34□□□□□ -0.75
PTCH1-225ENST00000551845 CDYLQ9Y232 598 aa10.34□□□□□ -0.75
PTCH1-225ENST00000551845 PCDHGA8Q9Y5G5 932 aa10.34□□□□□ -0.75
PTCH1-225ENST00000551845 ACACAQ13085 2346 aa10.34□□□□□ -0.75
PTCH1-225ENST00000551845 OR6C74A6NCV1 312 aa10.33□□□□□ -0.76
PTCH1-225ENST00000551845 ESPNB1AK53 854 aa10.33□□□□□ -0.76
PTCH1-225ENST00000551845 PLD2O14939 933 aa10.33□□□□□ -0.76
PTCH1-225ENST00000551845 TOX3O15405 576 aaPredicted RBP10.33□□□□□ -0.76
PTCH1-225ENST00000551845 VPS26AO75436 327 aa10.33□□□□□ -0.76
PTCH1-225ENST00000551845 MPOP05164 745 aa10.33□□□□□ -0.76
PTCH1-225ENST00000551845 JMJD7P0C870 316 aa10.33□□□□□ -0.76
PTCH1-225ENST00000551845 GABRB3P28472 473 aa10.33□□□□□ -0.76
PTCH1-225ENST00000551845 CLCN7P51798 805 aa10.33□□□□□ -0.76
PTCH1-225ENST00000551845 PDX1P52945 283 aa10.33□□□□□ -0.76
PTCH1-225ENST00000551845 GABREP78334 506 aa10.33□□□□□ -0.76
PTCH1-225ENST00000551845 ILF2Q12905 390 aaKnown RBP10.33□□□□□ -0.76
PTCH1-225ENST00000551845 C3orf38Q5JPI3 329 aa10.33□□□□□ -0.76
PTCH1-225ENST00000551845 IRGCQ6NXR0 463 aa10.33□□□□□ -0.76
PTCH1-225ENST00000551845 ZNF549Q6P9A3 640 aa10.33□□□□□ -0.76
PTCH1-225ENST00000551845 UNC5DQ6UXZ4 953 aa10.33□□□□□ -0.76
PTCH1-225ENST00000551845 CAPN12Q6ZSI9 719 aa10.33□□□□□ -0.76
PTCH1-225ENST00000551845 STRA8Q7Z7C7 330 aa10.33□□□□□ -0.76
PTCH1-225ENST00000551845 SLC26A11Q86WA9 606 aa10.33□□□□□ -0.76
PTCH1-225ENST00000551845 AMIGO1Q86WK6 493 aa10.33□□□□□ -0.76
PTCH1-225ENST00000551845 OOSP2Q86WS3 158 aa10.33□□□□□ -0.76
PTCH1-225ENST00000551845 VRK3Q8IV63 474 aa10.33□□□□□ -0.76
PTCH1-225ENST00000551845 AGBL5Q8NDL9 886 aa10.33□□□□□ -0.76
PTCH1-225ENST00000551845 OR52E1Q8NGJ3 308 aa10.33□□□□□ -0.76
PTCH1-225ENST00000551845 OR5K2Q8NHB8 316 aa10.33□□□□□ -0.76
PTCH1-225ENST00000551845 JPH3Q8WXH2 748 aaPredicted RBP10.33□□□□□ -0.76
PTCH1-225ENST00000551845 FAM136AQ96C01 138 aa10.33□□□□□ -0.76
PTCH1-225ENST00000551845 NXPE2Q96DL1 559 aa10.33□□□□□ -0.76
PTCH1-225ENST00000551845 C9orf72Q96LT7 481 aa10.33□□□□□ -0.76
PTCH1-225ENST00000551845 CCDC74BQ96LY2 380 aa10.33□□□□□ -0.76
PTCH1-225ENST00000551845 SLC46A1Q96NT5 459 aa10.33□□□□□ -0.76
PTCH1-225ENST00000551845 TGM7Q96PF1 710 aa10.33□□□□□ -0.76
PTCH1-225ENST00000551845 AARSD1Q9BTE6 412 aaKnown RBP10.33□□□□□ -0.76
PTCH1-225ENST00000551845 PRORYQ9H606 182 aa10.33□□□□□ -0.76
PTCH1-225ENST00000551845 L2HGDHQ9H9P8 463 aa10.33□□□□□ -0.76
PTCH1-225ENST00000551845 ZDHHC18Q9NUE0 388 aa10.33□□□□□ -0.76
PTCH1-225ENST00000551845 TAS2R13Q9NYV9 303 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms