RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 H0Y858 1186 aa11.25□□□□□ -0.61
RAB5C-208ENST00000551338 MANBAO00462 879 aa11.25□□□□□ -0.61
RAB5C-208ENST00000551338 NME4O00746 187 aa11.25□□□□□ -0.61
RAB5C-208ENST00000551338 CASQ2O14958 399 aaPredicted RBP11.25□□□□□ -0.61
RAB5C-208ENST00000551338 ANKRD28O15084 1053 aa11.25□□□□□ -0.61
RAB5C-208ENST00000551338 ANGPT2O15123 496 aa11.25□□□□□ -0.61
RAB5C-208ENST00000551338 INPP4BO15327 924 aa11.25□□□□□ -0.61
RAB5C-208ENST00000551338 TSPAN6O43657 245 aa11.25□□□□□ -0.61
RAB5C-208ENST00000551338 SLCO2B1O94956 709 aa11.25□□□□□ -0.61
RAB5C-208ENST00000551338 ADRB3P13945 408 aa11.25□□□□□ -0.61
RAB5C-208ENST00000551338 GJA4P35212 333 aa11.25□□□□□ -0.61
RAB5C-208ENST00000551338 MRPS22P82650 360 aaKnown RBP11.25□□□□□ -0.61
RAB5C-208ENST00000551338 ELP6Q0PNE2 266 aa11.25□□□□□ -0.61
RAB5C-208ENST00000551338 HYAL1Q12794 435 aa11.25□□□□□ -0.61
RAB5C-208ENST00000551338 ELAVL3Q14576 367 aaKnown RBP11.25□□□□□ -0.61
RAB5C-208ENST00000551338 TLR1Q15399 786 aa11.25□□□□□ -0.61
RAB5C-208ENST00000551338 VPS26BQ4G0F5 336 aa11.25□□□□□ -0.61
RAB5C-208ENST00000551338 ZNF658BQ4V348 819 aaPredicted RBP11.25□□□□□ -0.61
RAB5C-208ENST00000551338 ATP6AP1LQ52LC2 224 aa11.25□□□□□ -0.61
RAB5C-208ENST00000551338 C6orf10Q5SRN2 563 aa11.25□□□□□ -0.61
RAB5C-208ENST00000551338 NEK5Q6P3R8 708 aa11.25□□□□□ -0.61
RAB5C-208ENST00000551338 ZFAND4Q86XD8 727 aa11.25□□□□□ -0.61
RAB5C-208ENST00000551338 BHLHE22Q8NFJ8 381 aaPredicted RBP11.25□□□□□ -0.61
RAB5C-208ENST00000551338 UCMAQ8WVF2 138 aa11.25□□□□□ -0.61
RAB5C-208ENST00000551338 USP7Q93009 1102 aa11.25□□□□□ -0.61
RAB5C-208ENST00000551338 ASB9Q96DX5 294 aa11.25□□□□□ -0.61
RAB5C-208ENST00000551338 NUS1Q96E22 293 aa11.25□□□□□ -0.61
RAB5C-208ENST00000551338 SLC39A3Q9BRY0 314 aa11.25□□□□□ -0.61
RAB5C-208ENST00000551338 TRIM54Q9BYV2 358 aa11.25□□□□□ -0.61
RAB5C-208ENST00000551338 ACTL8Q9H568 366 aa11.25□□□□□ -0.61
RAB5C-208ENST00000551338 ZFP14Q9HCL3 533 aa11.25□□□□□ -0.61
RAB5C-208ENST00000551338 SPAG4Q9NPE6 437 aa11.25□□□□□ -0.61
RAB5C-208ENST00000551338 MRPL40Q9NQ50 206 aaKnown RBP11.25□□□□□ -0.61
RAB5C-208ENST00000551338 FARSBQ9NSD9 589 aaKnown RBP11.25□□□□□ -0.61
RAB5C-208ENST00000551338 TMEM45AQ9NWC5 275 aa11.25□□□□□ -0.61
RAB5C-208ENST00000551338 THAP10Q9P2Z0 257 aaPredicted RBP11.25□□□□□ -0.61
RAB5C-208ENST00000551338 CNOT6Q9ULM6 557 aaKnown RBP11.25□□□□□ -0.61
RAB5C-208ENST00000551338 ATG2BQ96BY7 2078 aa11.24□□□□□ -0.61
RAB5C-208ENST00000551338 PRSS51A0A1B0GVH4 220 aa11.24□□□□□ -0.61
RAB5C-208ENST00000551338 A0A1W2PP18 115 aa11.24□□□□□ -0.61
RAB5C-208ENST00000551338 FAM234BA2RU67 622 aa11.24□□□□□ -0.61
RAB5C-208ENST00000551338 KRT87PA6NCN2 255 aa11.24□□□□□ -0.61
RAB5C-208ENST00000551338 ARHGEF33A8MVX0 844 aa11.24□□□□□ -0.61
RAB5C-208ENST00000551338 SLC28A1O00337 649 aa11.24□□□□□ -0.61
RAB5C-208ENST00000551338 PRAMEF4O60810 478 aa11.24□□□□□ -0.61
RAB5C-208ENST00000551338 LILRB5O75023 590 aa11.24□□□□□ -0.61
RAB5C-208ENST00000551338 ATG13O75143 517 aa11.24□□□□□ -0.61
RAB5C-208ENST00000551338 PSIP1O75475 530 aaKnown RBP11.24□□□□□ -0.61
RAB5C-208ENST00000551338 EEDO75530 441 aaKnown RBP11.24□□□□□ -0.61
RAB5C-208ENST00000551338 SLC22A3O75751 556 aa11.24□□□□□ -0.61
RAB5C-208ENST00000551338 RECQL5O94762 991 aaPredicted RBP11.24□□□□□ -0.61
RAB5C-208ENST00000551338 C8BP07358 591 aa11.24□□□□□ -0.61
RAB5C-208ENST00000551338 C6P13671 934 aa11.24□□□□□ -0.61
RAB5C-208ENST00000551338 TCN1P20061 433 aaPredicted RBP11.24□□□□□ -0.61
RAB5C-208ENST00000551338 ATXN3P54252 364 aaPredicted RBP11.24□□□□□ -0.61
RAB5C-208ENST00000551338 AP1S2P56377 157 aa11.24□□□□□ -0.61
RAB5C-208ENST00000551338 KCNK10P57789 538 aa11.24□□□□□ -0.61
RAB5C-208ENST00000551338 FOXM1Q08050 763 aa11.24□□□□□ -0.61
RAB5C-208ENST00000551338 TRAP1Q12931 704 aaKnown RBP11.24□□□□□ -0.61
RAB5C-208ENST00000551338 TRIM25Q14258 630 aaKnown RBP11.24□□□□□ -0.61
RAB5C-208ENST00000551338 RAB30Q15771 203 aa11.24□□□□□ -0.61
RAB5C-208ENST00000551338 SMU1Q2TAY7 513 aa11.24□□□□□ -0.61
RAB5C-208ENST00000551338 AP5B1Q2VPB7 878 aa11.24□□□□□ -0.61
RAB5C-208ENST00000551338 PTCHD3Q3KNS1 767 aa11.24□□□□□ -0.61
RAB5C-208ENST00000551338 GGTA1PQ4G0N0 100 aa11.24□□□□□ -0.61
RAB5C-208ENST00000551338 BCL7AQ4VC05 210 aa11.24□□□□□ -0.61
RAB5C-208ENST00000551338 SLC44A4Q53GD3 710 aa11.24□□□□□ -0.61
RAB5C-208ENST00000551338 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.24□□□□□ -0.61
RAB5C-208ENST00000551338 PAGE3Q5JUK9 113 aa11.24□□□□□ -0.61
RAB5C-208ENST00000551338 SAMD4BQ5PRF9 694 aaKnown RBP11.24□□□□□ -0.61
RAB5C-208ENST00000551338 PRAMEF9Q5VWM5 478 aa11.24□□□□□ -0.61
RAB5C-208ENST00000551338 EGFLAMQ63HQ2 1017 aa11.24□□□□□ -0.61
RAB5C-208ENST00000551338 PRMT9Q6P2P2 845 aa11.24□□□□□ -0.61
RAB5C-208ENST00000551338 FBXL19Q6PCT2 694 aa11.24□□□□□ -0.61
RAB5C-208ENST00000551338 TMEM220Q6QAJ8 160 aa11.24□□□□□ -0.61
RAB5C-208ENST00000551338 CYP20A1Q6UW02 462 aa11.24□□□□□ -0.61
RAB5C-208ENST00000551338 PQLC1Q8N2U9 271 aa11.24□□□□□ -0.61
RAB5C-208ENST00000551338 MINDY1Q8N5J2 469 aa11.24□□□□□ -0.61
RAB5C-208ENST00000551338 LILRA3Q8N6C8 439 aaPredicted RBP11.24□□□□□ -0.61
RAB5C-208ENST00000551338 PROKR1Q8TCW9 393 aa11.24□□□□□ -0.61
RAB5C-208ENST00000551338 SKA2Q8WVK7 121 aaPredicted RBP11.24□□□□□ -0.61
RAB5C-208ENST00000551338 FBXL8Q96CD0 374 aa11.24□□□□□ -0.61
RAB5C-208ENST00000551338 MRPL38Q96DV4 380 aaKnown RBP11.24□□□□□ -0.61
RAB5C-208ENST00000551338 PPP1R16AQ96I34 528 aa11.24□□□□□ -0.61
RAB5C-208ENST00000551338 RSRC1Q96IZ7 334 aaKnown RBP11.24□□□□□ -0.61
RAB5C-208ENST00000551338 PPP3R2Q96LZ3 170 aa11.24□□□□□ -0.61
RAB5C-208ENST00000551338 P2RY13Q9BPV8 354 aa11.24□□□□□ -0.61
RAB5C-208ENST00000551338 KXD1Q9BQD3 176 aa11.24□□□□□ -0.61
RAB5C-208ENST00000551338 PCDHAC1Q9H158 963 aa11.24□□□□□ -0.61
RAB5C-208ENST00000551338 ZDHHC4Q9NPG8 344 aa11.24□□□□□ -0.61
RAB5C-208ENST00000551338 PRSS16Q9NQE7 514 aa11.24□□□□□ -0.61
RAB5C-208ENST00000551338 CMTM6Q9NX76 183 aa11.24□□□□□ -0.61
RAB5C-208ENST00000551338 FAM8A1Q9UBU6 413 aa11.24□□□□□ -0.61
RAB5C-208ENST00000551338 BCAP29Q9UHQ4 241 aa11.24□□□□□ -0.61
RAB5C-208ENST00000551338 MSRAQ9UJ68 235 aa11.24□□□□□ -0.61
RAB5C-208ENST00000551338 LEF1Q9UJU2 399 aaPredicted RBP11.24□□□□□ -0.61
RAB5C-208ENST00000551338 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.23□□□□□ -0.61
RAB5C-208ENST00000551338 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.23□□□□□ -0.61
RAB5C-208ENST00000551338 C1QTNF3-AMACRE9PGA6 284 aa11.23□□□□□ -0.61
RAB5C-208ENST00000551338 RGS14O43566 566 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms