RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 OR4K2Q8NGD2 314 aa6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 CTNNBL1Q8WYA6 563 aaPredicted RBP6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 INPP5DQ92835 1189 aa6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 ZNF501Q96CX3 271 aaPredicted RBP6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 CLIP3Q96DZ5 547 aa6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 ZDHHC12Q96GR4 267 aa6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 ZNF514Q96K75 400 aaPredicted RBP6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 TEKT5Q96M29 485 aa6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 ZNF830Q96NB3 372 aaPredicted RBP6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 BPIFA3Q9BQP9 254 aa6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 EFHD1Q9BUP0 239 aa6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 MAK16Q9BXY0 300 aaKnown RBP6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 SPRTNQ9H040 489 aaPredicted RBP6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 NAT10Q9H0A0 1025 aaKnown RBP6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 FAM60AQ9NP50 221 aa6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 PDE7BQ9NP56 450 aa6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 ACSS2Q9NR19 701 aa6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 ASF1BQ9NVP2 202 aa6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 IL17CQ9P0M4 197 aa6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 STOX2Q9P2F5 926 aaPredicted RBP6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 KLHL8Q9P2G9 620 aaPredicted RBP6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 SLC24A2Q9UI40 661 aa6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 ERRFI1Q9UJM3 462 aaPredicted RBP6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 CDYLQ9Y232 598 aa6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 NTNG1Q9Y2I2 539 aa6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 AKAP9Q99996 3911 aa6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 APCP25054 2843 aa6.65□□□□□ -1.35
PRPF40B-214ENST00000551320 OTOGQ6ZRI0 2925 aa6.65□□□□□ -1.35
PRPF40B-214ENST00000551320 CELSR1Q9NYQ6 3014 aa6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 FER1L5A0AVI2 2057 aa6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 SVILO95425 2214 aa6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 CNTRLQ7Z7A1 2325 aa6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 ELOA3CA0A087WX78 387 aaPredicted RBP6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 A0A1W2PQJ5 194 aa6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 CCDC66A2RUB6 948 aa6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 RGSL1A5PLK6 1076 aa6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 ELOA3DA6NLF2 546 aaPredicted RBP6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 J3QW42 95 aa6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 BTN3A1O00481 513 aa6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 VEGFDO43915 354 aa6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 CNOT3O75175 753 aaKnown RBP6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 SORBS2O94875 1100 aaKnown RBP6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 H2AFZP0C0S5 128 aa6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 ZNF16P17020 682 aaPredicted RBP6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 TPH1P17752 444 aa6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 CDH3P22223 829 aa6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 SPAM1P38567 509 aa6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 HALP42357 657 aa6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 CDKN2BP42772 138 aa6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 ST13P50502 369 aaKnown RBP6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 CSE1LP55060 971 aaKnown RBP6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 DCDC1P59894 354 aa6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 RPS15P62841 145 aaKnown RBP6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 HSD11B2P80365 405 aa6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 MAP7Q14244 749 aa6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 PDK1Q15118 436 aa6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 PRKD1Q15139 912 aaPredicted RBP6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 SLC1A5Q15758 541 aa6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 ZIC1Q15915 447 aa6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 ELOA3BQ3SY89 546 aa6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 ZNF789Q5FWF6 425 aa6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 AGAP9Q5VTM2 703 aa6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 MLIPQ5VWP3 458 aa6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 SLC6A19Q695T7 634 aa6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 FAM198BQ6UWH4 519 aa6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 C1orf229Q6ZS94 237 aaPredicted RBP6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 SHISA6Q6ZSJ9 500 aa6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 H2AFVQ71UI9 128 aa6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 GLT6D1Q7Z4J2 308 aa6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 MAP7D3Q8IWC1 876 aa6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 GALNT12Q8IXK2 581 aa6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 CLDN19Q8N6F1 224 aa6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 METTL27Q8N6F8 245 aaPredicted RBP6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 ELOA3Q8NG57 546 aa6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 ZNF398Q8TD17 642 aa6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 ADAMTS17Q8TE56 1095 aa6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 EPS8L3Q8TE67 593 aaKnown RBP6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 SSC4DQ8WTU2 575 aa6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 KRT35Q92764 455 aa6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 RBM41Q96IZ5 413 aaKnown RBP6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 FERD3LQ96RJ6 166 aa6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 MDFIQ99750 246 aa6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 HGH1Q9BTY7 390 aa6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 UCK1Q9HA47 277 aa6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 NPHS2Q9NP85 383 aa6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 WASH6PQ9NQA3 447 aa6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 LATS2Q9NRM7 1088 aa6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 KCND1Q9NSA2 647 aa6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 POT1Q9NUX5 634 aa6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 PCMTD2Q9NV79 361 aa6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 SPHK1Q9NYA1 384 aa6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 DHCR7Q9UBM7 475 aaKnown RBP6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 FAM153AQ9UHL3 310 aa6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 DNPEPQ9ULA0 475 aa6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 SNX7Q9UNH6 387 aa6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 PCDHGA6Q9Y5G7 932 aa6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 PRSS21Q9Y6M0 314 aa6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 CROCCQ5TZA2 2017 aa6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 DIDO1Q9BTC0 2240 aaKnown RBP6.64□□□□□ -1.35
PRPF40B-214ENST00000551320 LOC285095A0A1B0GVY8 99 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms