RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 ACY1Q03154 408 aa12.63□□□□□ -0.39
NPAS3-209ENST00000551008 NFATC3Q12968 1075 aa12.63□□□□□ -0.39
NPAS3-209ENST00000551008 GPS2Q13227 327 aa12.63□□□□□ -0.39
NPAS3-209ENST00000551008 GRB7Q14451 532 aa12.63□□□□□ -0.39
NPAS3-209ENST00000551008 KCNJ11Q14654 390 aa12.63□□□□□ -0.39
NPAS3-209ENST00000551008 ZIC1Q15915 447 aa12.63□□□□□ -0.39
NPAS3-209ENST00000551008 CRTC2Q53ET0 693 aaPredicted RBP12.63□□□□□ -0.39
NPAS3-209ENST00000551008 ANKRD22Q5VYY1 191 aa12.63□□□□□ -0.39
NPAS3-209ENST00000551008 LCN10Q6JVE6 187 aa12.63□□□□□ -0.39
NPAS3-209ENST00000551008 CES3Q6UWW8 571 aa12.63□□□□□ -0.39
NPAS3-209ENST00000551008 ZNF517Q6ZMY9 492 aaPredicted RBP12.63□□□□□ -0.39
NPAS3-209ENST00000551008 TMEM135Q86UB9 458 aa12.63□□□□□ -0.39
NPAS3-209ENST00000551008 TRIM73Q86UV7 250 aa12.63□□□□□ -0.39
NPAS3-209ENST00000551008 SPNS2Q8IVW8 549 aa12.63□□□□□ -0.39
NPAS3-209ENST00000551008 CARFQ8N187 725 aa12.63□□□□□ -0.39
NPAS3-209ENST00000551008 KRT222Q8N1A0 295 aa12.63□□□□□ -0.39
NPAS3-209ENST00000551008 LMNTD1Q8N9Z9 388 aa12.63□□□□□ -0.39
NPAS3-209ENST00000551008 FCRL4Q96PJ5 515 aa12.63□□□□□ -0.39
NPAS3-209ENST00000551008 KLHL25Q9H0H3 589 aa12.63□□□□□ -0.39
NPAS3-209ENST00000551008 P2RY12Q9H244 342 aa12.63□□□□□ -0.39
NPAS3-209ENST00000551008 SRMSQ9H3Y6 488 aa12.63□□□□□ -0.39
NPAS3-209ENST00000551008 VPS37BQ9H9H4 285 aa12.63□□□□□ -0.39
NPAS3-209ENST00000551008 FAM60AQ9NP50 221 aa12.63□□□□□ -0.39
NPAS3-209ENST00000551008 LHX9Q9NQ69 397 aa12.63□□□□□ -0.39
NPAS3-209ENST00000551008 C1GALT1Q9NS00 363 aa12.63□□□□□ -0.39
NPAS3-209ENST00000551008 GEMIN8Q9NWZ8 242 aaKnown RBP12.63□□□□□ -0.39
NPAS3-209ENST00000551008 SYBUQ9NX95 663 aa12.63□□□□□ -0.39
NPAS3-209ENST00000551008 SPHK1Q9NYA1 384 aa12.63□□□□□ -0.39
NPAS3-209ENST00000551008 TTC7AQ9ULT0 858 aaPredicted RBP12.63□□□□□ -0.39
NPAS3-209ENST00000551008 PLAGL1Q9UM63 463 aa12.63□□□□□ -0.39
NPAS3-209ENST00000551008 HEATR5BQ9P2D3 2071 aa12.63□□□□□ -0.39
NPAS3-209ENST00000551008 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.62□□□□□ -0.39
NPAS3-209ENST00000551008 IFRD1O00458 451 aaPredicted RBP12.62□□□□□ -0.39
NPAS3-209ENST00000551008 FTH1P02794 183 aa12.62□□□□□ -0.39
NPAS3-209ENST00000551008 CTSBP07858 339 aa12.62□□□□□ -0.39
NPAS3-209ENST00000551008 TPSB2P20231 275 aa12.62□□□□□ -0.39
NPAS3-209ENST00000551008 CSE1LP55060 971 aaKnown RBP12.62□□□□□ -0.39
NPAS3-209ENST00000551008 POLE2P56282 527 aa12.62□□□□□ -0.39
NPAS3-209ENST00000551008 TUBB4BP68371 445 aa12.62□□□□□ -0.39
NPAS3-209ENST00000551008 DNASE1L3Q13609 305 aa12.62□□□□□ -0.39
NPAS3-209ENST00000551008 TUBB2AQ13885 445 aa12.62□□□□□ -0.39
NPAS3-209ENST00000551008 TRIP13Q15645 432 aaPredicted RBP12.62□□□□□ -0.39
NPAS3-209ENST00000551008 TPSAB1Q15661 275 aa12.62□□□□□ -0.39
NPAS3-209ENST00000551008 PCID2Q5JVF3 399 aa12.62□□□□□ -0.39
NPAS3-209ENST00000551008 FAM199XQ6PEV8 388 aaPredicted RBP12.62□□□□□ -0.39
NPAS3-209ENST00000551008 BORAQ6PGQ7 559 aa12.62□□□□□ -0.39
NPAS3-209ENST00000551008 UNC5AQ6ZN44 842 aa12.62□□□□□ -0.39
NPAS3-209ENST00000551008 ZNF605Q86T29 641 aa12.62□□□□□ -0.39
NPAS3-209ENST00000551008 AMIGO1Q86WK6 493 aa12.62□□□□□ -0.39
NPAS3-209ENST00000551008 SLC22A15Q8IZD6 547 aa12.62□□□□□ -0.39
NPAS3-209ENST00000551008 AGGF1Q8N302 714 aaeCLIP12.62□□□□□ -0.39
NPAS3-209ENST00000551008 MPP5Q8N3R9 675 aa12.62□□□□□ -0.39
NPAS3-209ENST00000551008 PPHLN1Q8NEY8 458 aaKnown RBP12.62□□□□□ -0.39
NPAS3-209ENST00000551008 OR6P1Q8NGX9 317 aa12.62□□□□□ -0.39
NPAS3-209ENST00000551008 OR1L3Q8NH93 324 aa12.62□□□□□ -0.39
NPAS3-209ENST00000551008 KIAA1143Q96AT1 154 aaPredicted RBP12.62□□□□□ -0.39
NPAS3-209ENST00000551008 MFSD3Q96ES6 412 aa12.62□□□□□ -0.39
NPAS3-209ENST00000551008 STAMBPL1Q96FJ0 436 aa12.62□□□□□ -0.39
NPAS3-209ENST00000551008 TRAPPC9Q96Q05 1148 aa12.62□□□□□ -0.39
NPAS3-209ENST00000551008 OR2A14Q96R47 310 aa12.62□□□□□ -0.39
NPAS3-209ENST00000551008 TUBB2BQ9BVA1 445 aa12.62□□□□□ -0.39
NPAS3-209ENST00000551008 KIFC1Q9BW19 673 aa12.62□□□□□ -0.39
NPAS3-209ENST00000551008 AP1M1Q9BXS5 423 aa12.62□□□□□ -0.39
NPAS3-209ENST00000551008 PDE7BQ9NP56 450 aa12.62□□□□□ -0.39
NPAS3-209ENST00000551008 LATS2Q9NRM7 1088 aa12.62□□□□□ -0.39
NPAS3-209ENST00000551008 CATSPERZQ9NTU4 200 aa12.62□□□□□ -0.39
NPAS3-209ENST00000551008 ACTR10Q9NZ32 417 aa12.62□□□□□ -0.39
NPAS3-209ENST00000551008 PCDHGA6Q9Y5G7 932 aa12.62□□□□□ -0.39
NPAS3-209ENST00000551008 NUP210LQ5VU65 1888 aa12.61□□□□□ -0.39
NPAS3-209ENST00000551008 GSAPA4D1B5 854 aa12.61□□□□□ -0.39
NPAS3-209ENST00000551008 KRT87PA6NCN2 255 aa12.61□□□□□ -0.39
NPAS3-209ENST00000551008 QSOX1O00391 747 aa12.61□□□□□ -0.39
NPAS3-209ENST00000551008 AVILO75366 819 aa12.61□□□□□ -0.39
NPAS3-209ENST00000551008 ZIC2O95409 532 aaPredicted RBP12.61□□□□□ -0.39
NPAS3-209ENST00000551008 GAS8O95995 478 aa12.61□□□□□ -0.39
NPAS3-209ENST00000551008 CAPN1P07384 714 aa12.61□□□□□ -0.39
NPAS3-209ENST00000551008 OR56A5P0C7T3 313 aa12.61□□□□□ -0.39
NPAS3-209ENST00000551008 MSL3P1P0C860 447 aa12.61□□□□□ -0.39
NPAS3-209ENST00000551008 UGT2B7P16662 529 aa12.61□□□□□ -0.39
NPAS3-209ENST00000551008 CDH3P22223 829 aa12.61□□□□□ -0.39
NPAS3-209ENST00000551008 RORAP35398 523 aa12.61□□□□□ -0.39
NPAS3-209ENST00000551008 VPS41P49754 854 aa12.61□□□□□ -0.39
NPAS3-209ENST00000551008 RPS18P62269 152 aaKnown RBP12.61□□□□□ -0.39
NPAS3-209ENST00000551008 PRAMEP78395 509 aa12.61□□□□□ -0.39
NPAS3-209ENST00000551008 KRT33BQ14525 404 aa12.61□□□□□ -0.39
NPAS3-209ENST00000551008 CYP1B1Q16678 543 aa12.61□□□□□ -0.39
NPAS3-209ENST00000551008 FASTKD1Q53R41 847 aaKnown RBP12.61□□□□□ -0.39
NPAS3-209ENST00000551008 CTSL3PQ5NE16 218 aa12.61□□□□□ -0.39
NPAS3-209ENST00000551008 LYPLAL1Q5VWZ2 237 aa12.61□□□□□ -0.39
NPAS3-209ENST00000551008 ARMC6Q6NXE6 501 aa12.61□□□□□ -0.39
NPAS3-209ENST00000551008 CDHR3Q6ZTQ4 885 aa12.61□□□□□ -0.39
NPAS3-209ENST00000551008 NLRP9Q7RTR0 991 aa12.61□□□□□ -0.39
NPAS3-209ENST00000551008 CAND1Q86VP6 1230 aaKnown RBP12.61□□□□□ -0.39
NPAS3-209ENST00000551008 TBC1D21Q8IYX1 336 aa12.61□□□□□ -0.39
NPAS3-209ENST00000551008 LINC01555Q8NAE3 123 aa12.61□□□□□ -0.39
NPAS3-209ENST00000551008 OR5K2Q8NHB8 316 aa12.61□□□□□ -0.39
NPAS3-209ENST00000551008 COG1Q8WTW3 980 aa12.61□□□□□ -0.39
NPAS3-209ENST00000551008 MAIP1Q8WWC4 291 aa12.61□□□□□ -0.39
NPAS3-209ENST00000551008 CPT1BQ92523 772 aa12.61□□□□□ -0.39
NPAS3-209ENST00000551008 CARD6Q9BX69 1037 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms