RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 TMEM272A0A1B0GTI8 110 aa5.23□□□□□ -1.57
CPSF6-206ENST00000550987 SLC16A5O15375 505 aa5.23□□□□□ -1.57
CPSF6-206ENST00000550987 SPINT2O43291 252 aa5.23□□□□□ -1.57
CPSF6-206ENST00000550987 ZBTB43O43298 467 aa5.23□□□□□ -1.57
CPSF6-206ENST00000550987 SLCO2B1O94956 709 aa5.23□□□□□ -1.57
CPSF6-206ENST00000550987 NDUFB8O95169 186 aa5.23□□□□□ -1.57
CPSF6-206ENST00000550987 VNN2O95498 520 aa5.23□□□□□ -1.57
CPSF6-206ENST00000550987 LATS1O95835 1130 aa5.23□□□□□ -1.57
CPSF6-206ENST00000550987 BDKRB2P30411 391 aa5.23□□□□□ -1.57
CPSF6-206ENST00000550987 PCGF2P35227 344 aa5.23□□□□□ -1.57
CPSF6-206ENST00000550987 GDF5P43026 501 aa5.23□□□□□ -1.57
CPSF6-206ENST00000550987 ALDH7A1P49419 539 aaKnown RBP5.23□□□□□ -1.57
CPSF6-206ENST00000550987 BMXP51813 675 aa5.23□□□□□ -1.57
CPSF6-206ENST00000550987 ZNF75DP51815 510 aa5.23□□□□□ -1.57
CPSF6-206ENST00000550987 CAPZA1P52907 286 aa5.23□□□□□ -1.57
CPSF6-206ENST00000550987 ZP1P60852 638 aa5.23□□□□□ -1.57
CPSF6-206ENST00000550987 ADORA2A-AS1P86434 159 aa5.23□□□□□ -1.57
CPSF6-206ENST00000550987 SCN1BQ07699 218 aa5.23□□□□□ -1.57
CPSF6-206ENST00000550987 SIGLEC14Q08ET2 396 aa5.23□□□□□ -1.57
CPSF6-206ENST00000550987 LAMB3Q13751 1172 aa5.23□□□□□ -1.57
CPSF6-206ENST00000550987 ZDHHC20Q5W0Z9 365 aa5.23□□□□□ -1.57
CPSF6-206ENST00000550987 TRAT1Q6PIZ9 186 aa5.23□□□□□ -1.57
CPSF6-206ENST00000550987 FAM43BQ6ZT52 329 aaPredicted RBP5.23□□□□□ -1.57
CPSF6-206ENST00000550987 ZC3HC1Q86WB0 502 aaKnown RBP5.23□□□□□ -1.57
CPSF6-206ENST00000550987 NUP93Q8N1F7 819 aa5.23□□□□□ -1.57
CPSF6-206ENST00000550987 TMEM199Q8N511 208 aa5.23□□□□□ -1.57
CPSF6-206ENST00000550987 XXYLT1Q8NBI6 393 aa5.23□□□□□ -1.57
CPSF6-206ENST00000550987 SLC4A11Q8NBS3 891 aa5.23□□□□□ -1.57
CPSF6-206ENST00000550987 OR10S1Q8NGN2 331 aa5.23□□□□□ -1.57
CPSF6-206ENST00000550987 NXNL1Q96CM4 212 aa5.23□□□□□ -1.57
CPSF6-206ENST00000550987 LINC00615Q96LM1 132 aaPredicted RBP5.23□□□□□ -1.57
CPSF6-206ENST00000550987 APOLD1Q96LR9 279 aa5.23□□□□□ -1.57
CPSF6-206ENST00000550987 ZNF558Q96NG5 402 aa5.23□□□□□ -1.57
CPSF6-206ENST00000550987 DACH2Q96NX9 599 aa5.23□□□□□ -1.57
CPSF6-206ENST00000550987 GPATCH1Q9BRR8 931 aaKnown RBP5.23□□□□□ -1.57
CPSF6-206ENST00000550987 MMTAG2Q9BU76 263 aaKnown RBP5.23□□□□□ -1.57
CPSF6-206ENST00000550987 GPR88Q9GZN0 384 aa5.23□□□□□ -1.57
CPSF6-206ENST00000550987 NOL11Q9H8H0 719 aaKnown RBP5.23□□□□□ -1.57
CPSF6-206ENST00000550987 CNOT10Q9H9A5 744 aaKnown RBP5.23□□□□□ -1.57
CPSF6-206ENST00000550987 COPS7BQ9H9Q2 264 aaPredicted RBP5.23□□□□□ -1.57
CPSF6-206ENST00000550987 NRIP3Q9NQ35 241 aa5.23□□□□□ -1.57
CPSF6-206ENST00000550987 SIRT3Q9NTG7 399 aaPredicted RBP5.23□□□□□ -1.57
CPSF6-206ENST00000550987 IL17BQ9UHF5 180 aa5.23□□□□□ -1.57
CPSF6-206ENST00000550987 ACSL5Q9ULC5 683 aa5.23□□□□□ -1.57
CPSF6-206ENST00000550987 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.23□□□□□ -1.57
CPSF6-206ENST00000550987 OTOFQ9HC10 1997 aa5.23□□□□□ -1.57
CPSF6-206ENST00000550987 ATXN2Q99700 1313 aaKnown RBP5.23□□□□□ -1.57
CPSF6-206ENST00000550987 DUOX1Q9NRD9 1551 aa5.22□□□□□ -1.57
CPSF6-206ENST00000550987 ZMYM2Q9UBW7 1377 aa5.22□□□□□ -1.57
CPSF6-206ENST00000550987 A0A0G2JK05 382 aa5.22□□□□□ -1.57
CPSF6-206ENST00000550987 TRIM64A6NGJ6 449 aa5.22□□□□□ -1.57
CPSF6-206ENST00000550987 TRIM64BA6NI03 449 aa5.22□□□□□ -1.57
CPSF6-206ENST00000550987 CGB1A6NKQ9 187 aa5.22□□□□□ -1.57
CPSF6-206ENST00000550987 YDJCA8MPS7 323 aa5.22□□□□□ -1.57
CPSF6-206ENST00000550987 B8ZZF3 427 aa5.22□□□□□ -1.57
CPSF6-206ENST00000550987 PLPP2O43688 288 aa5.22□□□□□ -1.57
CPSF6-206ENST00000550987 ATG13O75143 517 aa5.22□□□□□ -1.57
CPSF6-206ENST00000550987 SYF2O95926 243 aaKnown RBP5.22□□□□□ -1.57
CPSF6-206ENST00000550987 PDGFBP01127 241 aaPredicted RBP5.22□□□□□ -1.57
CPSF6-206ENST00000550987 NAGAP17050 411 aa5.22□□□□□ -1.57
CPSF6-206ENST00000550987 TCEA1P23193 301 aaKnown RBP5.22□□□□□ -1.57
CPSF6-206ENST00000550987 NR2F2P24468 414 aa5.22□□□□□ -1.57
CPSF6-206ENST00000550987 NMBRP28336 390 aa5.22□□□□□ -1.57
CPSF6-206ENST00000550987 HOXC13P31276 330 aa5.22□□□□□ -1.57
CPSF6-206ENST00000550987 HNRNPH1P31943 449 aaKnown RBP5.22□□□□□ -1.57
CPSF6-206ENST00000550987 HSPA4P34932 840 aa5.22□□□□□ -1.57
CPSF6-206ENST00000550987 RPL3P39023 403 aaKnown RBP5.22□□□□□ -1.57
CPSF6-206ENST00000550987 NPY4RP50391 375 aa5.22□□□□□ -1.57
CPSF6-206ENST00000550987 POLGP54098 1239 aaPredicted RBP5.22□□□□□ -1.57
CPSF6-206ENST00000550987 PROK1P58294 105 aa5.22□□□□□ -1.57
CPSF6-206ENST00000550987 SELENOVP59797 346 aa5.22□□□□□ -1.57
CPSF6-206ENST00000550987 HYAL4Q2M3T9 481 aa5.22□□□□□ -1.57
CPSF6-206ENST00000550987 SUPT20HL1Q3ZLR7 823 aa5.22□□□□□ -1.57
CPSF6-206ENST00000550987 NSUN5P2Q63ZY6 315 aa5.22□□□□□ -1.57
CPSF6-206ENST00000550987 TYW3Q6IPR3 259 aaKnown RBP5.22□□□□□ -1.57
CPSF6-206ENST00000550987 KCTD18Q6PI47 426 aaPredicted RBP5.22□□□□□ -1.57
CPSF6-206ENST00000550987 SUSD1Q6UWL2 747 aa5.22□□□□□ -1.57
CPSF6-206ENST00000550987 Q6ZTK2 550 aa5.22□□□□□ -1.57
CPSF6-206ENST00000550987 ZNF367Q7RTV3 350 aa5.22□□□□□ -1.57
CPSF6-206ENST00000550987 CENPVQ7Z7K6 275 aaPredicted RBP5.22□□□□□ -1.57
CPSF6-206ENST00000550987 TMEM173Q86WV6 379 aaPredicted RBP5.22□□□□□ -1.57
CPSF6-206ENST00000550987 SIX6OS1Q8N1H7 587 aa5.22□□□□□ -1.57
CPSF6-206ENST00000550987 Q8N1X5 172 aa5.22□□□□□ -1.57
CPSF6-206ENST00000550987 RASGEF1CQ8N431 466 aa5.22□□□□□ -1.57
CPSF6-206ENST00000550987 EMC1Q8N766 993 aa5.22□□□□□ -1.57
CPSF6-206ENST00000550987 TMEM105Q8N8V8 129 aa5.22□□□□□ -1.57
CPSF6-206ENST00000550987 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.22□□□□□ -1.57
CPSF6-206ENST00000550987 FAM98AQ8NCA5 519 aaKnown RBP5.22□□□□□ -1.57
CPSF6-206ENST00000550987 KCNE4Q8WWG9 221 aa5.22□□□□□ -1.57
CPSF6-206ENST00000550987 DPF1Q92782 380 aa5.22□□□□□ -1.57
CPSF6-206ENST00000550987 LRFN5Q96NI6 719 aa5.22□□□□□ -1.57
CPSF6-206ENST00000550987 TRMOQ9BU70 441 aa5.22□□□□□ -1.57
CPSF6-206ENST00000550987 MBNL1Q9NR56 388 aaKnown RBP5.22□□□□□ -1.57
CPSF6-206ENST00000550987 PCDHA12Q9UN75 941 aa5.22□□□□□ -1.57
CPSF6-206ENST00000550987 SMTNL1A8MU46 457 aa5.21□□□□□ -1.58
CPSF6-206ENST00000550987 B4DGG1 531 aa5.21□□□□□ -1.58
CPSF6-206ENST00000550987 ASAP2O43150 1006 aa5.21□□□□□ -1.58
CPSF6-206ENST00000550987 NDUFS4O43181 175 aa5.21□□□□□ -1.58
CPSF6-206ENST00000550987 HSPA12AO43301 675 aa5.21□□□□□ -1.58
CPSF6-206ENST00000550987 SPRY1O43609 319 aaPredicted RBP5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms