RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 CCDC162PA2VCL2 907 aa10.55□□□□□ -0.72
VTI1BP3-201ENST00000550220 E7EQ34 232 aa10.55□□□□□ -0.72
VTI1BP3-201ENST00000550220 MEN1O00255 615 aa10.55□□□□□ -0.72
VTI1BP3-201ENST00000550220 BTN3A3O00478 584 aa10.55□□□□□ -0.72
VTI1BP3-201ENST00000550220 ARHGAP6O43182 974 aa10.55□□□□□ -0.72
VTI1BP3-201ENST00000550220 ZIC2O95409 532 aaPredicted RBP10.55□□□□□ -0.72
VTI1BP3-201ENST00000550220 CYP2A7P20853 494 aa10.55□□□□□ -0.72
VTI1BP3-201ENST00000550220 AGXTP21549 392 aa10.55□□□□□ -0.72
VTI1BP3-201ENST00000550220 PDHA2P29803 388 aa10.55□□□□□ -0.72
VTI1BP3-201ENST00000550220 PRAMEP78395 509 aa10.55□□□□□ -0.72
VTI1BP3-201ENST00000550220 TLE1Q04724 770 aa10.55□□□□□ -0.72
VTI1BP3-201ENST00000550220 SEMA5AQ13591 1074 aa10.55□□□□□ -0.72
VTI1BP3-201ENST00000550220 OASLQ15646 514 aaKnown RBP10.55□□□□□ -0.72
VTI1BP3-201ENST00000550220 GPR19Q15760 415 aa10.55□□□□□ -0.72
VTI1BP3-201ENST00000550220 SYTL3Q4VX76 610 aa10.55□□□□□ -0.72
VTI1BP3-201ENST00000550220 FASTKD1Q53R41 847 aaKnown RBP10.55□□□□□ -0.72
VTI1BP3-201ENST00000550220 TSTD2Q5T7W7 516 aa10.55□□□□□ -0.72
VTI1BP3-201ENST00000550220 DRICH1Q6PGQ1 229 aaPredicted RBP10.55□□□□□ -0.72
VTI1BP3-201ENST00000550220 ZNF662Q6ZS27 426 aa10.55□□□□□ -0.72
VTI1BP3-201ENST00000550220 GPR135Q8IZ08 494 aa10.55□□□□□ -0.72
VTI1BP3-201ENST00000550220 TEX19Q8NA77 164 aa10.55□□□□□ -0.72
VTI1BP3-201ENST00000550220 SPC24Q8NBT2 197 aa10.55□□□□□ -0.72
VTI1BP3-201ENST00000550220 PHC3Q8NDX5 983 aa10.55□□□□□ -0.72
VTI1BP3-201ENST00000550220 OR6P1Q8NGX9 317 aa10.55□□□□□ -0.72
VTI1BP3-201ENST00000550220 OR4L1Q8NH43 312 aa10.55□□□□□ -0.72
VTI1BP3-201ENST00000550220 DENND1AQ8TEH3 1009 aa10.55□□□□□ -0.72
VTI1BP3-201ENST00000550220 NAT14Q8WUY8 206 aa10.55□□□□□ -0.72
VTI1BP3-201ENST00000550220 N4BP2L2Q92802 583 aaPredicted RBP10.55□□□□□ -0.72
VTI1BP3-201ENST00000550220 HDAC10Q969S8 669 aa10.55□□□□□ -0.72
VTI1BP3-201ENST00000550220 CLIP3Q96DZ5 547 aa10.55□□□□□ -0.72
VTI1BP3-201ENST00000550220 TCTN2Q96GX1 697 aa10.55□□□□□ -0.72
VTI1BP3-201ENST00000550220 TRAPPC9Q96Q05 1148 aa10.55□□□□□ -0.72
VTI1BP3-201ENST00000550220 DHRS4Q9BTZ2 278 aa10.55□□□□□ -0.72
VTI1BP3-201ENST00000550220 NLNQ9BYT8 704 aa10.55□□□□□ -0.72
VTI1BP3-201ENST00000550220 CASS4Q9NQ75 786 aa10.55□□□□□ -0.72
VTI1BP3-201ENST00000550220 RAB6BQ9NRW1 208 aa10.55□□□□□ -0.72
VTI1BP3-201ENST00000550220 HOMER3Q9NSC5 361 aa10.55□□□□□ -0.72
VTI1BP3-201ENST00000550220 ACTR10Q9NZ32 417 aa10.55□□□□□ -0.72
VTI1BP3-201ENST00000550220 GUCA1BQ9UMX6 200 aa10.55□□□□□ -0.72
VTI1BP3-201ENST00000550220 DRG1Q9Y295 367 aaKnown RBP10.55□□□□□ -0.72
VTI1BP3-201ENST00000550220 MRFAP1Q9Y605 127 aa10.55□□□□□ -0.72
VTI1BP3-201ENST00000550220 CAPN6Q9Y6Q1 641 aa10.55□□□□□ -0.72
VTI1BP3-201ENST00000550220 TCRBV7S2A1N4TA0A589 114 aa10.54□□□□□ -0.72
VTI1BP3-201ENST00000550220 SLC5A10A0PJK1 596 aa10.54□□□□□ -0.72
VTI1BP3-201ENST00000550220 TMEM150CB9EJG8 249 aa10.54□□□□□ -0.72
VTI1BP3-201ENST00000550220 BTN3A1O00481 513 aa10.54□□□□□ -0.72
VTI1BP3-201ENST00000550220 KPNA5O15131 536 aa10.54□□□□□ -0.72
VTI1BP3-201ENST00000550220 NRDCO43847 1150 aa10.54□□□□□ -0.72
VTI1BP3-201ENST00000550220 APOA4P06727 396 aa10.54□□□□□ -0.72
VTI1BP3-201ENST00000550220 APRTP07741 180 aa10.54□□□□□ -0.72
VTI1BP3-201ENST00000550220 ACADLP28330 430 aa10.54□□□□□ -0.72
VTI1BP3-201ENST00000550220 FOXN2P32314 431 aa10.54□□□□□ -0.72
VTI1BP3-201ENST00000550220 ARCN1P48444 511 aaKnown RBP10.54□□□□□ -0.72
VTI1BP3-201ENST00000550220 ITGA1P56199 1179 aa10.54□□□□□ -0.72
VTI1BP3-201ENST00000550220 ACVR1Q04771 509 aa10.54□□□□□ -0.72
VTI1BP3-201ENST00000550220 PRKG2Q13237 762 aa10.54□□□□□ -0.72
VTI1BP3-201ENST00000550220 KIR2DS3Q14952 304 aa10.54□□□□□ -0.72
VTI1BP3-201ENST00000550220 CCNG2Q16589 344 aa10.54□□□□□ -0.72
VTI1BP3-201ENST00000550220 PCID2Q5JVF3 399 aa10.54□□□□□ -0.72
VTI1BP3-201ENST00000550220 PLEKHS1Q5SXH7 462 aa10.54□□□□□ -0.72
VTI1BP3-201ENST00000550220 ATP1A1-AS1Q5TC04 95 aa10.54□□□□□ -0.72
VTI1BP3-201ENST00000550220 ARMC3Q5W041 872 aa10.54□□□□□ -0.72
VTI1BP3-201ENST00000550220 SPESP1Q6UW49 350 aa10.54□□□□□ -0.72
VTI1BP3-201ENST00000550220 HPS6Q86YV9 775 aa10.54□□□□□ -0.72
VTI1BP3-201ENST00000550220 ADGRF3Q8IZF5 1079 aa10.54□□□□□ -0.72
VTI1BP3-201ENST00000550220 DSELQ8IZU8 1212 aa10.54□□□□□ -0.72
VTI1BP3-201ENST00000550220 MPP5Q8N3R9 675 aa10.54□□□□□ -0.72
VTI1BP3-201ENST00000550220 PPHLN1Q8NEY8 458 aaKnown RBP10.54□□□□□ -0.72
VTI1BP3-201ENST00000550220 OR13J1Q8NGT2 312 aa10.54□□□□□ -0.72
VTI1BP3-201ENST00000550220 OR5K2Q8NHB8 316 aa10.54□□□□□ -0.72
VTI1BP3-201ENST00000550220 ASZ1Q8WWH4 475 aa10.54□□□□□ -0.72
VTI1BP3-201ENST00000550220 ATG4AQ8WYN0 398 aa10.54□□□□□ -0.72
VTI1BP3-201ENST00000550220 SLC22A18Q96BI1 424 aa10.54□□□□□ -0.72
VTI1BP3-201ENST00000550220 IP6K3Q96PC2 410 aa10.54□□□□□ -0.72
VTI1BP3-201ENST00000550220 CARD6Q9BX69 1037 aa10.54□□□□□ -0.72
VTI1BP3-201ENST00000550220 TLR10Q9BXR5 811 aa10.54□□□□□ -0.72
VTI1BP3-201ENST00000550220 TRIM4Q9C037 500 aa10.54□□□□□ -0.72
VTI1BP3-201ENST00000550220 ACTR5Q9H9F9 607 aaPredicted RBP10.54□□□□□ -0.72
VTI1BP3-201ENST00000550220 ACSS2Q9NR19 701 aa10.54□□□□□ -0.72
VTI1BP3-201ENST00000550220 EIF2B3Q9NR50 452 aaKnown RBP10.54□□□□□ -0.72
VTI1BP3-201ENST00000550220 TLK1Q9UKI8 766 aa10.54□□□□□ -0.72
VTI1BP3-201ENST00000550220 SNX7Q9UNH6 387 aa10.54□□□□□ -0.72
VTI1BP3-201ENST00000550220 PADI2Q9Y2J8 665 aa10.54□□□□□ -0.72
VTI1BP3-201ENST00000550220 PCDHGB7Q9Y5F8 929 aa10.54□□□□□ -0.72
VTI1BP3-201ENST00000550220 C9J4A7 227 aa10.53□□□□□ -0.72
VTI1BP3-201ENST00000550220 PFDN6O15212 129 aa10.53□□□□□ -0.72
VTI1BP3-201ENST00000550220 KLHL41O60662 606 aa10.53□□□□□ -0.72
VTI1BP3-201ENST00000550220 GOT2P00505 430 aaKnown RBP10.53□□□□□ -0.72
VTI1BP3-201ENST00000550220 IGHEP01854 428 aa10.53□□□□□ -0.72
VTI1BP3-201ENST00000550220 CHRM5P08912 532 aaPredicted RBP10.53□□□□□ -0.72
VTI1BP3-201ENST00000550220 CCDC175P0C221 793 aa10.53□□□□□ -0.72
VTI1BP3-201ENST00000550220 ST6GAL1P15907 406 aa10.53□□□□□ -0.72
VTI1BP3-201ENST00000550220 RORAP35398 523 aa10.53□□□□□ -0.72
VTI1BP3-201ENST00000550220 NPY2RP49146 381 aa10.53□□□□□ -0.72
VTI1BP3-201ENST00000550220 TTPAP49638 278 aa10.53□□□□□ -0.72
VTI1BP3-201ENST00000550220 CDK16Q00536 496 aa10.53□□□□□ -0.72
VTI1BP3-201ENST00000550220 GPS2Q13227 327 aa10.53□□□□□ -0.72
VTI1BP3-201ENST00000550220 CCDC38Q502W7 563 aa10.53□□□□□ -0.72
VTI1BP3-201ENST00000550220 MEI1Q5TIA1 1274 aa10.53□□□□□ -0.72
VTI1BP3-201ENST00000550220 FAM199XQ6PEV8 388 aaPredicted RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms