RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 GFERP55789 205 aa21.91■■□□□ 1.1
BRF1-216ENST00000550208 UBAP2Q5T6F2 1119 aaKnown RBP21.91■■□□□ 1.1
BRF1-216ENST00000550208 HECTD2Q5U5R9 776 aa21.91■■□□□ 1.1
BRF1-216ENST00000550208 CEP128Q6ZU80 1094 aa21.91■■□□□ 1.1
BRF1-216ENST00000550208 RELL1Q8IUW5 271 aa21.91■■□□□ 1.1
BRF1-216ENST00000550208 GPATCH11Q8N954 259 aa21.91■■□□□ 1.1
BRF1-216ENST00000550208 RCBTB1Q8NDN9 531 aa21.91■■□□□ 1.1
BRF1-216ENST00000550208 OR5K2Q8NHB8 316 aa21.91■■□□□ 1.1
BRF1-216ENST00000550208 CD200R1Q8TD46 325 aa21.91■■□□□ 1.1
BRF1-216ENST00000550208 SKA2Q8WVK7 121 aaPredicted RBP21.91■■□□□ 1.1
BRF1-216ENST00000550208 GATA6Q92908 595 aa21.91■■□□□ 1.1
BRF1-216ENST00000550208 TMEM121BQ9BXQ6 578 aaPredicted RBP21.91■■□□□ 1.1
BRF1-216ENST00000550208 STRADBQ9C0K7 418 aa21.91■■□□□ 1.1
BRF1-216ENST00000550208 TSPYL1Q9H0U9 437 aa21.91■■□□□ 1.1
BRF1-216ENST00000550208 TFB2MQ9H5Q4 396 aaKnown RBP21.91■■□□□ 1.1
BRF1-216ENST00000550208 XKR8Q9H6D3 395 aa21.91■■□□□ 1.1
BRF1-216ENST00000550208 HRASLS2Q9NWW9 162 aa21.91■■□□□ 1.1
BRF1-216ENST00000550208 NINJ2Q9NZG7 142 aa21.91■■□□□ 1.1
BRF1-216ENST00000550208 KLHL3Q9UH77 587 aa21.91■■□□□ 1.1
BRF1-216ENST00000550208 VWA7Q9Y334 891 aa21.91■■□□□ 1.1
BRF1-216ENST00000550208 PMS2P1A4D2B8 440 aa21.9■■□□□ 1.1
BRF1-216ENST00000550208 OR6C74A6NCV1 312 aa21.9■■□□□ 1.1
BRF1-216ENST00000550208 THRAP10827 490 aa21.9■■□□□ 1.1
BRF1-216ENST00000550208 CAPZBP47756 277 aa21.9■■□□□ 1.1
BRF1-216ENST00000550208 PGGT1BP53609 377 aa21.9■■□□□ 1.1
BRF1-216ENST00000550208 PPP1CAP62136 330 aa21.9■■□□□ 1.1
BRF1-216ENST00000550208 C16orf72Q14CZ0 275 aa21.9■■□□□ 1.1
BRF1-216ENST00000550208 KLHL38Q2WGJ6 581 aa21.9■■□□□ 1.1
BRF1-216ENST00000550208 TTLL9Q3SXZ7 439 aa21.9■■□□□ 1.1
BRF1-216ENST00000550208 UNC5DQ6UXZ4 953 aa21.9■■□□□ 1.1
BRF1-216ENST00000550208 ZC3HC1Q86WB0 502 aaKnown RBP21.9■■□□□ 1.1
BRF1-216ENST00000550208 PLXDC1Q8IUK5 500 aa21.9■■□□□ 1.1
BRF1-216ENST00000550208 CDKL2Q92772 493 aa21.9■■□□□ 1.1
BRF1-216ENST00000550208 TGM7Q96PF1 710 aa21.9■■□□□ 1.1
BRF1-216ENST00000550208 NRSN2Q9GZP1 204 aa21.9■■□□□ 1.1
BRF1-216ENST00000550208 SRMSQ9H3Y6 488 aa21.9■■□□□ 1.1
BRF1-216ENST00000550208 NSMCE4AQ9NXX6 385 aa21.9■■□□□ 1.1
BRF1-216ENST00000550208 TAS2R13Q9NYV9 303 aa21.9■■□□□ 1.1
BRF1-216ENST00000550208 POLG2Q9UHN1 485 aa21.9■■□□□ 1.1
BRF1-216ENST00000550208 PLAGL1Q9UM63 463 aa21.9■■□□□ 1.1
BRF1-216ENST00000550208 CCDC187A0A096LP49 1063 aa21.89■■□□□ 1.09
BRF1-216ENST00000550208 OR5K3A6NET4 321 aa21.89■■□□□ 1.09
BRF1-216ENST00000550208 BTN3A3O00478 584 aa21.89■■□□□ 1.09
BRF1-216ENST00000550208 C9P02748 559 aa21.89■■□□□ 1.09
BRF1-216ENST00000550208 MPOP05164 745 aa21.89■■□□□ 1.09
BRF1-216ENST00000550208 POLR2CP19387 275 aaPredicted RBP21.89■■□□□ 1.09
BRF1-216ENST00000550208 MCM3P25205 808 aa21.89■■□□□ 1.09
BRF1-216ENST00000550208 ATP5DP30049 168 aa21.89■■□□□ 1.09
BRF1-216ENST00000550208 KBTBD12Q3ZCT8 623 aa21.89■■□□□ 1.09
BRF1-216ENST00000550208 C3orf38Q5JPI3 329 aa21.89■■□□□ 1.09
BRF1-216ENST00000550208 UGT3A1Q6NUS8 523 aa21.89■■□□□ 1.09
BRF1-216ENST00000550208 IRGCQ6NXR0 463 aa21.89■■□□□ 1.09
BRF1-216ENST00000550208 KLHL35Q6PF15 583 aa21.89■■□□□ 1.09
BRF1-216ENST00000550208 PAQR3Q6TCH7 311 aa21.89■■□□□ 1.09
BRF1-216ENST00000550208 CYHR1Q6ZMK1 362 aa21.89■■□□□ 1.09
BRF1-216ENST00000550208 RAB11FIP2Q7L804 512 aa21.89■■□□□ 1.09
BRF1-216ENST00000550208 CTAGE3PQ8IX95 158 aa21.89■■□□□ 1.09
BRF1-216ENST00000550208 CPNE9Q8IYJ1 553 aa21.89■■□□□ 1.09
BRF1-216ENST00000550208 LIN37Q96GY3 246 aaPredicted RBP21.89■■□□□ 1.09
BRF1-216ENST00000550208 MCMBPQ9BTE3 642 aa21.89■■□□□ 1.09
BRF1-216ENST00000550208 EPHA6Q9UF33 1036 aa21.89■■□□□ 1.09
BRF1-216ENST00000550208 CIDEBQ9UHD4 219 aa21.89■■□□□ 1.09
BRF1-216ENST00000550208 TRMT6Q9UJA5 497 aaKnown RBP21.89■■□□□ 1.09
BRF1-216ENST00000550208 CORO1CQ9ULV4 474 aaPredicted RBP21.89■■□□□ 1.09
BRF1-216ENST00000550208 SATB2Q9UPW6 733 aa21.89■■□□□ 1.09
BRF1-216ENST00000550208 ICKQ9UPZ9 632 aa21.89■■□□□ 1.09
BRF1-216ENST00000550208 C1QTNF9BB2RNN3 333 aa21.88■■□□□ 1.09
BRF1-216ENST00000550208 KIF1CO43896 1103 aaKnown RBP21.88■■□□□ 1.09
BRF1-216ENST00000550208 SPAG6O75602 509 aa21.88■■□□□ 1.09
BRF1-216ENST00000550208 MATN4O95460 622 aa21.88■■□□□ 1.09
BRF1-216ENST00000550208 C1QTNF9P0C862 333 aa21.88■■□□□ 1.09
BRF1-216ENST00000550208 CD9P21926 228 aa21.88■■□□□ 1.09
BRF1-216ENST00000550208 SKIV2L2P42285 1042 aaKnown RBP21.88■■□□□ 1.09
BRF1-216ENST00000550208 TRA2AQ13595 282 aaKnown RBP eCLIP21.88■■□□□ 1.09
BRF1-216ENST00000550208 RTP5Q14D33 572 aa21.88■■□□□ 1.09
BRF1-216ENST00000550208 FOXR1Q6PIV2 292 aa21.88■■□□□ 1.09
BRF1-216ENST00000550208 FAM92BQ6ZTR7 304 aa21.88■■□□□ 1.09
BRF1-216ENST00000550208 ARHGAP22Q7Z5H3 698 aa21.88■■□□□ 1.09
BRF1-216ENST00000550208 AMIGO1Q86WK6 493 aa21.88■■□□□ 1.09
BRF1-216ENST00000550208 OOSP2Q86WS3 158 aa21.88■■□□□ 1.09
BRF1-216ENST00000550208 FBXO39Q8N4B4 442 aa21.88■■□□□ 1.09
BRF1-216ENST00000550208 PPM1NQ8N819 430 aa21.88■■□□□ 1.09
BRF1-216ENST00000550208 WDR36Q8NI36 951 aaKnown RBP21.88■■□□□ 1.09
BRF1-216ENST00000550208 PRR11Q96HE9 360 aaPredicted RBP21.88■■□□□ 1.09
BRF1-216ENST00000550208 ELMO2Q96JJ3 720 aa21.88■■□□□ 1.09
BRF1-216ENST00000550208 OLFM1Q99784 485 aa21.88■■□□□ 1.09
BRF1-216ENST00000550208 RAB33BQ9H082 229 aa21.88■■□□□ 1.09
BRF1-216ENST00000550208 CDC42EP4Q9H3Q1 356 aaKnown RBP21.88■■□□□ 1.09
BRF1-216ENST00000550208 AK5Q9Y6K8 562 aa21.88■■□□□ 1.09
BRF1-216ENST00000550208 MN1Q10571 1320 aaPredicted RBP21.87■■□□□ 1.09
BRF1-216ENST00000550208 C1orf105O95561 183 aa21.87■■□□□ 1.09
BRF1-216ENST00000550208 MPC1LP0DKB6 136 aa21.87■■□□□ 1.09
BRF1-216ENST00000550208 HGFP14210 728 aa21.87■■□□□ 1.09
BRF1-216ENST00000550208 SAT1P21673 171 aa21.87■■□□□ 1.09
BRF1-216ENST00000550208 FDXRP22570 491 aa21.87■■□□□ 1.09
BRF1-216ENST00000550208 STX2P32856 288 aa21.87■■□□□ 1.09
BRF1-216ENST00000550208 BDKRB1P46663 353 aa21.87■■□□□ 1.09
BRF1-216ENST00000550208 LSSP48449 732 aa21.87■■□□□ 1.09
BRF1-216ENST00000550208 CYP4F3Q08477 520 aa21.87■■□□□ 1.09
BRF1-216ENST00000550208 GRB7Q14451 532 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms