RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 HOOK3Q86VS8 718 aa16.74■□□□□ 0.27
CHMP1A-208ENST00000550102 AMIGO1Q86WK6 493 aa16.74■□□□□ 0.27
CHMP1A-208ENST00000550102 TBC1D21Q8IYX1 336 aa16.74■□□□□ 0.27
CHMP1A-208ENST00000550102 CACNA2D3Q8IZS8 1091 aa16.74■□□□□ 0.27
CHMP1A-208ENST00000550102 KRT222Q8N1A0 295 aa16.74■□□□□ 0.27
CHMP1A-208ENST00000550102 IL22RA1Q8N6P7 574 aa16.74■□□□□ 0.27
CHMP1A-208ENST00000550102 OR5K2Q8NHB8 316 aa16.74■□□□□ 0.27
CHMP1A-208ENST00000550102 GSDMBQ8TAX9 411 aa16.74■□□□□ 0.27
CHMP1A-208ENST00000550102 LPGAT1Q92604 370 aa16.74■□□□□ 0.27
CHMP1A-208ENST00000550102 NKD1Q969G9 470 aa16.74■□□□□ 0.27
CHMP1A-208ENST00000550102 TRIM56Q9BRZ2 755 aaKnown RBP16.74■□□□□ 0.27
CHMP1A-208ENST00000550102 ULBP3Q9BZM4 244 aa16.74■□□□□ 0.27
CHMP1A-208ENST00000550102 POLG2Q9UHN1 485 aa16.74■□□□□ 0.27
CHMP1A-208ENST00000550102 PILRAQ9UKJ1 303 aa16.74■□□□□ 0.27
CHMP1A-208ENST00000550102 ICKQ9UPZ9 632 aa16.74■□□□□ 0.27
CHMP1A-208ENST00000550102 TMEM184BQ9Y519 407 aaPredicted RBP16.74■□□□□ 0.27
CHMP1A-208ENST00000550102 MAD1L1Q9Y6D9 718 aa16.74■□□□□ 0.27
CHMP1A-208ENST00000550102 RPS6KL1Q9Y6S9 549 aa16.74■□□□□ 0.27
CHMP1A-208ENST00000550102 H3BMM5 538 aa16.73■□□□□ 0.27
CHMP1A-208ENST00000550102 BTN3A1O00481 513 aa16.73■□□□□ 0.27
CHMP1A-208ENST00000550102 KPNA5O15131 536 aa16.73■□□□□ 0.27
CHMP1A-208ENST00000550102 ZBTB11O95625 1053 aaPredicted RBP16.73■□□□□ 0.27
CHMP1A-208ENST00000550102 RPN2P04844 631 aa16.73■□□□□ 0.27
CHMP1A-208ENST00000550102 PTGIRP43119 386 aa16.73■□□□□ 0.27
CHMP1A-208ENST00000550102 HSD11B2P80365 405 aa16.73■□□□□ 0.27
CHMP1A-208ENST00000550102 DR1Q01658 176 aa16.73■□□□□ 0.27
CHMP1A-208ENST00000550102 SRSF6Q13247 344 aaKnown RBP16.73■□□□□ 0.27
CHMP1A-208ENST00000550102 KCNAB1Q14722 419 aa16.73■□□□□ 0.27
CHMP1A-208ENST00000550102 IZUMO3Q5VZ72 239 aa16.73■□□□□ 0.27
CHMP1A-208ENST00000550102 NEPROQ6NW34 567 aa16.73■□□□□ 0.27
CHMP1A-208ENST00000550102 PCGF5Q86SE9 256 aa16.73■□□□□ 0.27
CHMP1A-208ENST00000550102 TMEM135Q86UB9 458 aa16.73■□□□□ 0.27
CHMP1A-208ENST00000550102 CILP2Q8IUL8 1156 aa16.73■□□□□ 0.27
CHMP1A-208ENST00000550102 KLHL7Q8IXQ5 586 aa16.73■□□□□ 0.27
CHMP1A-208ENST00000550102 NLGN4XQ8N0W4 816 aa16.73■□□□□ 0.27
CHMP1A-208ENST00000550102 NLGN4YQ8NFZ3 816 aaPredicted RBP16.73■□□□□ 0.27
CHMP1A-208ENST00000550102 STAMBPL1Q96FJ0 436 aa16.73■□□□□ 0.27
CHMP1A-208ENST00000550102 PDE7BQ9NP56 450 aa16.73■□□□□ 0.27
CHMP1A-208ENST00000550102 KCND1Q9NSA2 647 aa16.73■□□□□ 0.27
CHMP1A-208ENST00000550102 INTS10Q9NVR2 710 aaKnown RBP16.73■□□□□ 0.27
CHMP1A-208ENST00000550102 SOHLH2Q9NX45 425 aa16.73■□□□□ 0.27
CHMP1A-208ENST00000550102 RNF14Q9UBS8 474 aa16.73■□□□□ 0.27
CHMP1A-208ENST00000550102 CDYLQ9Y232 598 aa16.73■□□□□ 0.27
CHMP1A-208ENST00000550102 PIEZO2Q9H5I5 2752 aa16.72■□□□□ 0.27
CHMP1A-208ENST00000550102 ATRXP46100 2492 aa16.72■□□□□ 0.27
CHMP1A-208ENST00000550102 C2orf74A8MZ97 194 aa16.72■□□□□ 0.27
CHMP1A-208ENST00000550102 CCDC188H7C350 402 aa16.72■□□□□ 0.27
CHMP1A-208ENST00000550102 FANCGO15287 622 aa16.72■□□□□ 0.27
CHMP1A-208ENST00000550102 EFSO43281 561 aa16.72■□□□□ 0.27
CHMP1A-208ENST00000550102 GPC4O75487 556 aa16.72■□□□□ 0.27
CHMP1A-208ENST00000550102 USP1O94782 785 aa16.72■□□□□ 0.27
CHMP1A-208ENST00000550102 SLCO2B1O94956 709 aa16.72■□□□□ 0.27
CHMP1A-208ENST00000550102 DLGAP3O95886 979 aa16.72■□□□□ 0.27
CHMP1A-208ENST00000550102 ESR1P03372 595 aa16.72■□□□□ 0.27
CHMP1A-208ENST00000550102 EBLN1P0CF75 366 aa16.72■□□□□ 0.27
CHMP1A-208ENST00000550102 FGF5P12034 268 aa16.72■□□□□ 0.27
CHMP1A-208ENST00000550102 CDH3P22223 829 aa16.72■□□□□ 0.27
CHMP1A-208ENST00000550102 ADARP55265 1226 aaKnown RBP16.72■□□□□ 0.27
CHMP1A-208ENST00000550102 RHDQ02161 417 aa16.72■□□□□ 0.27
CHMP1A-208ENST00000550102 ACY1Q03154 408 aa16.72■□□□□ 0.27
CHMP1A-208ENST00000550102 THOC5Q13769 683 aaKnown RBP16.72■□□□□ 0.27
CHMP1A-208ENST00000550102 LONRF1Q17RB8 773 aa16.72■□□□□ 0.27
CHMP1A-208ENST00000550102 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.72■□□□□ 0.27
CHMP1A-208ENST00000550102 CTSL3PQ5NE16 218 aa16.72■□□□□ 0.27
CHMP1A-208ENST00000550102 TMTC4Q5T4D3 741 aa16.72■□□□□ 0.27
CHMP1A-208ENST00000550102 UNC5DQ6UXZ4 953 aa16.72■□□□□ 0.27
CHMP1A-208ENST00000550102 OTOAQ7RTW8 1153 aa16.72■□□□□ 0.27
CHMP1A-208ENST00000550102 PPP1R3BQ86XI6 285 aa16.72■□□□□ 0.27
CHMP1A-208ENST00000550102 RASGRP3Q8IV61 690 aa16.72■□□□□ 0.27
CHMP1A-208ENST00000550102 VRK3Q8IV63 474 aa16.72■□□□□ 0.27
CHMP1A-208ENST00000550102 AGGF1Q8N302 714 aaeCLIP16.72■□□□□ 0.27
CHMP1A-208ENST00000550102 ZSCAN1Q8NBB4 408 aa16.72■□□□□ 0.27
CHMP1A-208ENST00000550102 KIAA1143Q96AT1 154 aaPredicted RBP16.72■□□□□ 0.27
CHMP1A-208ENST00000550102 XKR8Q9H6D3 395 aa16.72■□□□□ 0.27
CHMP1A-208ENST00000550102 C1GALT1Q9NS00 363 aa16.72■□□□□ 0.27
CHMP1A-208ENST00000550102 IL1RAPL1Q9NZN1 696 aa16.72■□□□□ 0.27
CHMP1A-208ENST00000550102 TDRKHQ9Y2W6 561 aaKnown RBP16.72■□□□□ 0.27
CHMP1A-208ENST00000550102 PCDHGA4Q9Y5G9 962 aa16.72■□□□□ 0.27
CHMP1A-208ENST00000550102 ZCWPW2A0A1B0GU75 182 aa16.71■□□□□ 0.27
CHMP1A-208ENST00000550102 BTN3A3O00478 584 aa16.71■□□□□ 0.27
CHMP1A-208ENST00000550102 FOLR1P15328 257 aa16.71■□□□□ 0.27
CHMP1A-208ENST00000550102 PGAM1P18669 254 aa16.71■□□□□ 0.27
CHMP1A-208ENST00000550102 MAP4P27816 1152 aaKnown RBP16.71■□□□□ 0.27
CHMP1A-208ENST00000550102 MAP7Q14244 749 aa16.71■□□□□ 0.27
CHMP1A-208ENST00000550102 DCUN1D3Q8IWE4 304 aa16.71■□□□□ 0.27
CHMP1A-208ENST00000550102 ADGRF3Q8IZF5 1079 aa16.71■□□□□ 0.27
CHMP1A-208ENST00000550102 D2HGDHQ8N465 521 aa16.71■□□□□ 0.27
CHMP1A-208ENST00000550102 ESX1Q8N693 406 aa16.71■□□□□ 0.27
CHMP1A-208ENST00000550102 CALML6Q8TD86 181 aa16.71■□□□□ 0.27
CHMP1A-208ENST00000550102 ELMO2Q96JJ3 720 aa16.71■□□□□ 0.27
CHMP1A-208ENST00000550102 SIGLEC10Q96LC7 697 aa16.71■□□□□ 0.27
CHMP1A-208ENST00000550102 PPM1MQ96MI6 270 aa16.71■□□□□ 0.27
CHMP1A-208ENST00000550102 BIRC8Q96P09 236 aa16.71■□□□□ 0.27
CHMP1A-208ENST00000550102 PITPNM3Q9BZ71 974 aa16.71■□□□□ 0.27
CHMP1A-208ENST00000550102 SPRY4Q9C004 299 aa16.71■□□□□ 0.27
CHMP1A-208ENST00000550102 FGF21Q9NSA1 209 aa16.71■□□□□ 0.27
CHMP1A-208ENST00000550102 ACTR10Q9NZ32 417 aa16.71■□□□□ 0.27
CHMP1A-208ENST00000550102 OR6C2Q9NZP2 312 aa16.71■□□□□ 0.27
CHMP1A-208ENST00000550102 LNPEPQ9UIQ6 1025 aa16.71■□□□□ 0.27
CHMP1A-208ENST00000550102 RARRES3Q9UL19 164 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms