RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 GPR21Q99679 349 aa18.83■□□□□ 0.6
DDX54-207ENST00000550016 RHOXF2Q9BQY4 288 aa18.83■□□□□ 0.6
DDX54-207ENST00000550016 SRMSQ9H3Y6 488 aa18.83■□□□□ 0.6
DDX54-207ENST00000550016 POLR1BQ9H9Y6 1135 aa18.83■□□□□ 0.6
DDX54-207ENST00000550016 LRRC4CQ9HCJ2 640 aa18.83■□□□□ 0.6
DDX54-207ENST00000550016 TAS2R13Q9NYV9 303 aa18.83■□□□□ 0.6
DDX54-207ENST00000550016 PSAT1Q9Y617 370 aa18.83■□□□□ 0.6
DDX54-207ENST00000550016 SNRNP200O75643 2136 aaKnown RBP18.82■□□□□ 0.6
DDX54-207ENST00000550016 CHD8Q9HCK8 2581 aa18.82■□□□□ 0.6
DDX54-207ENST00000550016 TCRBV9S1A1TA0A576 114 aa18.82■□□□□ 0.6
DDX54-207ENST00000550016 OR6C74A6NCV1 312 aa18.82■□□□□ 0.6
DDX54-207ENST00000550016 CAPN5O15484 640 aaPredicted RBP18.82■□□□□ 0.6
DDX54-207ENST00000550016 SPAG6O75602 509 aa18.82■□□□□ 0.6
DDX54-207ENST00000550016 SKIV2L2P42285 1042 aaKnown RBP18.82■□□□□ 0.6
DDX54-207ENST00000550016 ABCG1P45844 678 aa18.82■□□□□ 0.6
DDX54-207ENST00000550016 EIF3IQ13347 325 aaKnown RBP18.82■□□□□ 0.6
DDX54-207ENST00000550016 ACSBG2Q5FVE4 666 aa18.82■□□□□ 0.6
DDX54-207ENST00000550016 C3orf38Q5JPI3 329 aa18.82■□□□□ 0.6
DDX54-207ENST00000550016 SNAP47Q5SQN1 464 aa18.82■□□□□ 0.6
DDX54-207ENST00000550016 RBM20Q5T481 1227 aaKnown RBP18.82■□□□□ 0.6
DDX54-207ENST00000550016 UNQ6494/PRO21346Q6UXR6 183 aa18.82■□□□□ 0.6
DDX54-207ENST00000550016 STRA8Q7Z7C7 330 aa18.82■□□□□ 0.6
DDX54-207ENST00000550016 OOSP2Q86WS3 158 aa18.82■□□□□ 0.6
DDX54-207ENST00000550016 RELL1Q8IUW5 271 aa18.82■□□□□ 0.6
DDX54-207ENST00000550016 OR52E1Q8NGJ3 308 aa18.82■□□□□ 0.6
DDX54-207ENST00000550016 SKA2Q8WVK7 121 aaPredicted RBP18.82■□□□□ 0.6
DDX54-207ENST00000550016 CDKL2Q92772 493 aa18.82■□□□□ 0.6
DDX54-207ENST00000550016 FOPNLQ96NB1 174 aa18.82■□□□□ 0.6
DDX54-207ENST00000550016 SLC30A3Q99726 388 aa18.82■□□□□ 0.6
DDX54-207ENST00000550016 CMKLR1Q99788 373 aa18.82■□□□□ 0.6
DDX54-207ENST00000550016 SMYD2Q9NRG4 433 aa18.82■□□□□ 0.6
DDX54-207ENST00000550016 HRASLS2Q9NWW9 162 aa18.82■□□□□ 0.6
DDX54-207ENST00000550016 AKAP7Q9P0M2 348 aaPredicted RBP18.82■□□□□ 0.6
DDX54-207ENST00000550016 SATB2Q9UPW6 733 aa18.82■□□□□ 0.6
DDX54-207ENST00000550016 TDRKHQ9Y2W6 561 aaKnown RBP18.82■□□□□ 0.6
DDX54-207ENST00000550016 AK5Q9Y6K8 562 aa18.82■□□□□ 0.6
DDX54-207ENST00000550016 A0A1W2PNU3 283 aaPredicted RBP18.81■□□□□ 0.6
DDX54-207ENST00000550016 OR5K3A6NET4 321 aa18.81■□□□□ 0.6
DDX54-207ENST00000550016 FAM159BA6NKW6 160 aa18.81■□□□□ 0.6
DDX54-207ENST00000550016 A8MU76 341 aa18.81■□□□□ 0.6
DDX54-207ENST00000550016 HGSO14964 777 aaPredicted RBP18.81■□□□□ 0.6
DDX54-207ENST00000550016 KDM1AO60341 852 aa18.81■□□□□ 0.6
DDX54-207ENST00000550016 MPOP05164 745 aa18.81■□□□□ 0.6
DDX54-207ENST00000550016 CD9P21926 228 aa18.81■□□□□ 0.6
DDX54-207ENST00000550016 GFERP55789 205 aa18.81■□□□□ 0.6
DDX54-207ENST00000550016 GABREP78334 506 aa18.81■□□□□ 0.6
DDX54-207ENST00000550016 TIAL1Q01085 375 aaKnown RBP eCLIP18.81■□□□□ 0.6
DDX54-207ENST00000550016 ILF2Q12905 390 aaKnown RBP18.81■□□□□ 0.6
DDX54-207ENST00000550016 C16orf72Q14CZ0 275 aa18.81■□□□□ 0.6
DDX54-207ENST00000550016 KLHL38Q2WGJ6 581 aa18.81■□□□□ 0.6
DDX54-207ENST00000550016 ARMC6Q6NXE6 501 aa18.81■□□□□ 0.6
DDX54-207ENST00000550016 IRGCQ6NXR0 463 aa18.81■□□□□ 0.6
DDX54-207ENST00000550016 TTC23LQ6PF05 361 aa18.81■□□□□ 0.6
DDX54-207ENST00000550016 NEK10Q6ZWH5 1172 aa18.81■□□□□ 0.6
DDX54-207ENST00000550016 ARHGAP22Q7Z5H3 698 aa18.81■□□□□ 0.6
DDX54-207ENST00000550016 FBXO39Q8N4B4 442 aa18.81■□□□□ 0.6
DDX54-207ENST00000550016 RCBTB1Q8NDN9 531 aa18.81■□□□□ 0.6
DDX54-207ENST00000550016 GIMAP7Q8NHV1 300 aa18.81■□□□□ 0.6
DDX54-207ENST00000550016 CD200R1Q8TD46 325 aa18.81■□□□□ 0.6
DDX54-207ENST00000550016 TGM7Q96PF1 710 aa18.81■□□□□ 0.6
DDX54-207ENST00000550016 KLHL3Q9UH77 587 aa18.81■□□□□ 0.6
DDX54-207ENST00000550016 TRMT6Q9UJA5 497 aaKnown RBP18.81■□□□□ 0.6
DDX54-207ENST00000550016 VWA7Q9Y334 891 aa18.81■□□□□ 0.6
DDX54-207ENST00000550016 PCDHGA8Q9Y5G5 932 aa18.81■□□□□ 0.6
DDX54-207ENST00000550016 CXorf49A8MYA2 514 aaPredicted RBP18.8■□□□□ 0.6
DDX54-207ENST00000550016 C1QTNF9BB2RNN3 333 aa18.8■□□□□ 0.6
DDX54-207ENST00000550016 PLD2O14939 933 aa18.8■□□□□ 0.6
DDX54-207ENST00000550016 MATN4O95460 622 aa18.8■□□□□ 0.6
DDX54-207ENST00000550016 C1QTNF9P0C862 333 aa18.8■□□□□ 0.6
DDX54-207ENST00000550016 CBSLP0DN79 551 aa18.8■□□□□ 0.6
DDX54-207ENST00000550016 ENO3P13929 434 aaPredicted RBP18.8■□□□□ 0.6
DDX54-207ENST00000550016 ECHS1P30084 290 aa18.8■□□□□ 0.6
DDX54-207ENST00000550016 STX2P32856 288 aa18.8■□□□□ 0.6
DDX54-207ENST00000550016 SHMT2P34897 504 aa18.8■□□□□ 0.6
DDX54-207ENST00000550016 CBSP35520 551 aa18.8■□□□□ 0.6
DDX54-207ENST00000550016 CDKN2DP55273 166 aa18.8■□□□□ 0.6
DDX54-207ENST00000550016 CYP4F3Q08477 520 aa18.8■□□□□ 0.6
DDX54-207ENST00000550016 KYNUQ16719 465 aa18.8■□□□□ 0.6
DDX54-207ENST00000550016 FAM45BPQ6NSW5 357 aa18.8■□□□□ 0.6
DDX54-207ENST00000550016 ZC3HC1Q86WB0 502 aaKnown RBP18.8■□□□□ 0.6
DDX54-207ENST00000550016 AMIGO1Q86WK6 493 aa18.8■□□□□ 0.6
DDX54-207ENST00000550016 DCUN1D3Q8IWE4 304 aa18.8■□□□□ 0.6
DDX54-207ENST00000550016 LSMEM2Q8N112 164 aa18.8■□□□□ 0.6
DDX54-207ENST00000550016 GPATCH11Q8N954 259 aa18.8■□□□□ 0.6
DDX54-207ENST00000550016 AGBL5Q8NDL9 886 aa18.8■□□□□ 0.6
DDX54-207ENST00000550016 FAM45AQ8TCE6 357 aa18.8■□□□□ 0.6
DDX54-207ENST00000550016 PRR11Q96HE9 360 aaPredicted RBP18.8■□□□□ 0.6
DDX54-207ENST00000550016 XKR8Q9H6D3 395 aa18.8■□□□□ 0.6
DDX54-207ENST00000550016 TSR3Q9UJK0 312 aaKnown RBP18.8■□□□□ 0.6
DDX54-207ENST00000550016 ICKQ9UPZ9 632 aa18.8■□□□□ 0.6
DDX54-207ENST00000550016 LOXL2Q9Y4K0 774 aa18.8■□□□□ 0.6
DDX54-207ENST00000550016 NFS1Q9Y697 457 aa18.8■□□□□ 0.6
DDX54-207ENST00000550016 EIF3FO00303 357 aaPredicted RBP18.79■□□□□ 0.6
DDX54-207ENST00000550016 MATN2O00339 956 aa18.79■□□□□ 0.6
DDX54-207ENST00000550016 TOX3O15405 576 aaPredicted RBP18.79■□□□□ 0.6
DDX54-207ENST00000550016 PIAS1O75925 651 aa18.79■□□□□ 0.6
DDX54-207ENST00000550016 C1orf105O95561 183 aa18.79■□□□□ 0.6
DDX54-207ENST00000550016 ANKRD34CP0C6C1 535 aa18.79■□□□□ 0.6
DDX54-207ENST00000550016 TPBGLP0DKB5 382 aa18.79■□□□□ 0.6
DDX54-207ENST00000550016 MPC1LP0DKB6 136 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms