RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-221ENST00000543545 LTA4HP09960 611 aaKnown RBP9.9□□□□□ -0.82
CPSF7-221ENST00000543545 HIST1H2AGP0C0S8 130 aaPredicted RBP9.9□□□□□ -0.82
CPSF7-221ENST00000543545 SLC35E2BP0CK96 405 aa9.9□□□□□ -0.82
CPSF7-221ENST00000543545 PYGBP11216 843 aa9.9□□□□□ -0.82
CPSF7-221ENST00000543545 HIST1H2ADP20671 130 aa9.9□□□□□ -0.82
CPSF7-221ENST00000543545 CYP2A7P20853 494 aa9.9□□□□□ -0.82
CPSF7-221ENST00000543545 ALDH4A1P30038 563 aa9.9□□□□□ -0.82
CPSF7-221ENST00000543545 GMPRP36959 345 aa9.9□□□□□ -0.82
CPSF7-221ENST00000543545 CCNFP41002 786 aa9.9□□□□□ -0.82
CPSF7-221ENST00000543545 BDKRB1P46663 353 aa9.9□□□□□ -0.82
CPSF7-221ENST00000543545 ATP6V0D1P61421 351 aa9.9□□□□□ -0.82
CPSF7-221ENST00000543545 UBE2IP63279 158 aaKnown RBP9.9□□□□□ -0.82
CPSF7-221ENST00000543545 IRF9Q00978 393 aa9.9□□□□□ -0.82
CPSF7-221ENST00000543545 FRA10AC1Q70Z53 315 aa9.9□□□□□ -0.82
CPSF7-221ENST00000543545 EFL1Q7Z2Z2 1120 aaKnown RBP9.9□□□□□ -0.82
CPSF7-221ENST00000543545 ZNF761Q86XN6 746 aaPredicted RBP9.9□□□□□ -0.82
CPSF7-221ENST00000543545 TBC1D21Q8IYX1 336 aa9.9□□□□□ -0.82
CPSF7-221ENST00000543545 Q8N9G6 341 aaPredicted RBP9.9□□□□□ -0.82
CPSF7-221ENST00000543545 FAM181AQ8N9Y4 354 aa9.9□□□□□ -0.82
CPSF7-221ENST00000543545 OR6C4Q8NGE1 309 aa9.9□□□□□ -0.82
CPSF7-221ENST00000543545 MCOLN3Q8TDD5 553 aa9.9□□□□□ -0.82
CPSF7-221ENST00000543545 NETO1Q8TDF5 533 aa9.9□□□□□ -0.82
CPSF7-221ENST00000543545 JPH3Q8WXH2 748 aaPredicted RBP9.9□□□□□ -0.82
CPSF7-221ENST00000543545 ASB11Q8WXH4 323 aa9.9□□□□□ -0.82
CPSF7-221ENST00000543545 NXNL1Q96CM4 212 aa9.9□□□□□ -0.82
CPSF7-221ENST00000543545 PDLIM5Q96HC4 596 aaKnown RBP9.9□□□□□ -0.82
CPSF7-221ENST00000543545 HIST1H2AHQ96KK5 128 aa9.9□□□□□ -0.82
CPSF7-221ENST00000543545 CDC6Q99741 560 aa9.9□□□□□ -0.82
CPSF7-221ENST00000543545 HIST1H2AJQ99878 128 aa9.9□□□□□ -0.82
CPSF7-221ENST00000543545 H2AFJQ9BTM1 129 aa9.9□□□□□ -0.82
CPSF7-221ENST00000543545 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.9□□□□□ -0.82
CPSF7-221ENST00000543545 DERL2Q9GZP9 239 aa9.9□□□□□ -0.82
CPSF7-221ENST00000543545 ZMYND15Q9H091 742 aa9.9□□□□□ -0.82
CPSF7-221ENST00000543545 ACBD3Q9H3P7 528 aa9.9□□□□□ -0.82
CPSF7-221ENST00000543545 SYNDIG1Q9H7V2 258 aa9.9□□□□□ -0.82
CPSF7-221ENST00000543545 NMRAL1Q9HBL8 299 aa9.9□□□□□ -0.82
CPSF7-221ENST00000543545 POT1Q9NUX5 634 aa9.9□□□□□ -0.82
CPSF7-221ENST00000543545 CIDEBQ9UHD4 219 aa9.9□□□□□ -0.82
CPSF7-221ENST00000543545 POLG2Q9UHN1 485 aa9.9□□□□□ -0.82
CPSF7-221ENST00000543545 LGALS13Q9UHV8 139 aa9.9□□□□□ -0.82
CPSF7-221ENST00000543545 RNF215Q9Y6U7 377 aa9.9□□□□□ -0.82
CPSF7-221ENST00000543545 RIF1Q5UIP0 2472 aaKnown RBP9.89□□□□□ -0.83
CPSF7-221ENST00000543545 CABIN1Q9Y6J0 2220 aa9.89□□□□□ -0.83
CPSF7-221ENST00000543545 CDC7O00311 574 aa9.89□□□□□ -0.83
CPSF7-221ENST00000543545 PPM1DO15297 605 aa9.89□□□□□ -0.83
CPSF7-221ENST00000543545 SLC16A5O15375 505 aa9.89□□□□□ -0.83
CPSF7-221ENST00000543545 NUDT21O43809 227 aaKnown RBP9.89□□□□□ -0.83
CPSF7-221ENST00000543545 KLHL2O95198 593 aa9.89□□□□□ -0.83
CPSF7-221ENST00000543545 MATN4O95460 622 aa9.89□□□□□ -0.83
CPSF7-221ENST00000543545 C1orf105O95561 183 aa9.89□□□□□ -0.83
CPSF7-221ENST00000543545 TSPAN12O95859 305 aa9.89□□□□□ -0.83
CPSF7-221ENST00000543545 CKMT1AP12532 417 aa9.89□□□□□ -0.83
CPSF7-221ENST00000543545 CD1DP15813 335 aa9.89□□□□□ -0.83
CPSF7-221ENST00000543545 GLB1P16278 677 aa9.89□□□□□ -0.83
CPSF7-221ENST00000543545 CKMT2P17540 419 aa9.89□□□□□ -0.83
CPSF7-221ENST00000543545 AMD1P17707 334 aa9.89□□□□□ -0.83
CPSF7-221ENST00000543545 KRT4P19013 534 aa9.89□□□□□ -0.83
CPSF7-221ENST00000543545 TFEBP19484 476 aa9.89□□□□□ -0.83
CPSF7-221ENST00000543545 SLC26A3P40879 764 aa9.89□□□□□ -0.83
CPSF7-221ENST00000543545 MAGEA12P43365 314 aa9.89□□□□□ -0.83
CPSF7-221ENST00000543545 GLRBP48167 497 aa9.89□□□□□ -0.83
CPSF7-221ENST00000543545 LIMK1P53667 647 aa9.89□□□□□ -0.83
CPSF7-221ENST00000543545 PROX2Q3B8N5 592 aa9.89□□□□□ -0.83
CPSF7-221ENST00000543545 AMZ1Q400G9 498 aa9.89□□□□□ -0.83
CPSF7-221ENST00000543545 GUSBP11Q6P575 273 aa9.89□□□□□ -0.83
CPSF7-221ENST00000543545 TMEM26Q6ZUK4 368 aa9.89□□□□□ -0.83
CPSF7-221ENST00000543545 ALYREFQ86V81 257 aaKnown RBP9.89□□□□□ -0.83
CPSF7-221ENST00000543545 DCUN1D3Q8IWE4 304 aa9.89□□□□□ -0.83
CPSF7-221ENST00000543545 RBM12BQ8IXT5 1001 aaKnown RBP9.89□□□□□ -0.83
CPSF7-221ENST00000543545 SRRM1Q8IYB3 904 aaKnown RBP9.89□□□□□ -0.83
CPSF7-221ENST00000543545 C4orf33Q8N1A6 199 aa9.89□□□□□ -0.83
CPSF7-221ENST00000543545 RAB42Q8N4Z0 105 aa9.89□□□□□ -0.83
CPSF7-221ENST00000543545 DEFB124Q8NES8 71 aa9.89□□□□□ -0.83
CPSF7-221ENST00000543545 OR4E2Q8NGC2 313 aa9.89□□□□□ -0.83
CPSF7-221ENST00000543545 OR5K2Q8NHB8 316 aa9.89□□□□□ -0.83
CPSF7-221ENST00000543545 ACMSDQ8TDX5 336 aa9.89□□□□□ -0.83
CPSF7-221ENST00000543545 LCN9Q8WX39 176 aa9.89□□□□□ -0.83
CPSF7-221ENST00000543545 NAT6Q93015 286 aa9.89□□□□□ -0.83
CPSF7-221ENST00000543545 EXT2Q93063 718 aa9.89□□□□□ -0.83
CPSF7-221ENST00000543545 ISL2Q96A47 359 aa9.89□□□□□ -0.83
CPSF7-221ENST00000543545 CCDC74AQ96AQ1 378 aa9.89□□□□□ -0.83
CPSF7-221ENST00000543545 RAD51AP1Q96B01 352 aa9.89□□□□□ -0.83
CPSF7-221ENST00000543545 AHCYL2Q96HN2 611 aaKnown RBP9.89□□□□□ -0.83
CPSF7-221ENST00000543545 SMC6Q96SB8 1091 aa9.89□□□□□ -0.83
CPSF7-221ENST00000543545 STMN4Q9H169 189 aaPredicted RBP9.89□□□□□ -0.83
CPSF7-221ENST00000543545 ALG9Q9H6U8 611 aa9.89□□□□□ -0.83
CPSF7-221ENST00000543545 PARVBQ9HBI1 364 aa9.89□□□□□ -0.83
CPSF7-221ENST00000543545 SLC40A1Q9NP59 571 aa9.89□□□□□ -0.83
CPSF7-221ENST00000543545 IGSF5Q9NSI5 407 aa9.89□□□□□ -0.83
CPSF7-221ENST00000543545 KCNK4Q9NYG8 393 aa9.89□□□□□ -0.83
CPSF7-221ENST00000543545 LNPEPQ9UIQ6 1025 aa9.89□□□□□ -0.83
CPSF7-221ENST00000543545 CDV3Q9UKY7 258 aaKnown RBP9.89□□□□□ -0.83
CPSF7-221ENST00000543545 PLAGL1Q9UM63 463 aa9.89□□□□□ -0.83
CPSF7-221ENST00000543545 CACNA1EQ15878 2313 aa9.89□□□□□ -0.83
CPSF7-221ENST00000543545 FANCMQ8IYD8 2048 aa9.89□□□□□ -0.83
CPSF7-221ENST00000543545 SCN8AQ9UQD0 1980 aa9.88□□□□□ -0.83
CPSF7-221ENST00000543545 VPS13AQ96RL7 3174 aa9.88□□□□□ -0.83
CPSF7-221ENST00000543545 CEP192Q8TEP8 1941 aa9.88□□□□□ -0.83
CPSF7-221ENST00000543545 PI4KAP42356 2102 aa9.88□□□□□ -0.83
CPSF7-221ENST00000543545 EME2A4GXA9 379 aaPredicted RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms