RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 CDK3Q00526 305 aa9.12□□□□□ -0.95
GNE-206ENST00000543356 PLOD1Q02809 727 aaPredicted RBP9.12□□□□□ -0.95
GNE-206ENST00000543356 CCDC85BQ15834 202 aaPredicted RBP9.12□□□□□ -0.95
GNE-206ENST00000543356 C18orf21Q32NC0 220 aaPredicted RBP9.12□□□□□ -0.95
GNE-206ENST00000543356 LEXMQ3ZCV2 418 aa9.12□□□□□ -0.95
GNE-206ENST00000543356 NEK5Q6P3R8 708 aa9.12□□□□□ -0.95
GNE-206ENST00000543356 LRRC70Q7Z2Q7 622 aa9.12□□□□□ -0.95
GNE-206ENST00000543356 HEATR4Q86WZ0 1026 aa9.12□□□□□ -0.95
GNE-206ENST00000543356 GALNT15Q8N3T1 639 aa9.12□□□□□ -0.95
GNE-206ENST00000543356 RPLP0P6Q8NHW5 317 aa9.12□□□□□ -0.95
GNE-206ENST00000543356 GANCQ8TET4 914 aa9.12□□□□□ -0.95
GNE-206ENST00000543356 SKA2Q8WVK7 121 aaPredicted RBP9.12□□□□□ -0.95
GNE-206ENST00000543356 FAM3CQ92520 227 aa9.12□□□□□ -0.95
GNE-206ENST00000543356 HLA-CQ95604 372 aa9.12□□□□□ -0.95
GNE-206ENST00000543356 ESAMQ96AP7 390 aa9.12□□□□□ -0.95
GNE-206ENST00000543356 LRCH3Q96II8 777 aa9.12□□□□□ -0.95
GNE-206ENST00000543356 HIST1H2AHQ96KK5 128 aa9.12□□□□□ -0.95
GNE-206ENST00000543356 LENG8Q96PV6 779 aaPredicted RBP9.12□□□□□ -0.95
GNE-206ENST00000543356 TSC22D3Q99576 134 aa9.12□□□□□ -0.95
GNE-206ENST00000543356 CCT7Q99832 543 aa9.12□□□□□ -0.95
GNE-206ENST00000543356 HIST1H2AJQ99878 128 aa9.12□□□□□ -0.95
GNE-206ENST00000543356 ARPC5LQ9BPX5 153 aa9.12□□□□□ -0.95
GNE-206ENST00000543356 H2AFJQ9BTM1 129 aa9.12□□□□□ -0.95
GNE-206ENST00000543356 ARL15Q9NXU5 204 aa9.12□□□□□ -0.95
GNE-206ENST00000543356 OPTCQ9UBM4 332 aa9.12□□□□□ -0.95
GNE-206ENST00000543356 ZNF225Q9UK10 706 aa9.12□□□□□ -0.95
GNE-206ENST00000543356 MMP17Q9ULZ9 603 aa9.12□□□□□ -0.95
GNE-206ENST00000543356 SZT2Q5T011 3432 aa9.12□□□□□ -0.95
GNE-206ENST00000543356 A0A1B0GTL3 188 aa9.12□□□□□ -0.95
GNE-206ENST00000543356 DCXO43602 365 aa9.12□□□□□ -0.95
GNE-206ENST00000543356 MGRN1O60291 552 aa9.12□□□□□ -0.95
GNE-206ENST00000543356 RNGTTO60942 597 aaKnown RBP9.12□□□□□ -0.95
GNE-206ENST00000543356 VPS4BO75351 444 aa9.12□□□□□ -0.95
GNE-206ENST00000543356 CHEK2O96017 543 aa9.12□□□□□ -0.95
GNE-206ENST00000543356 SLC6A12P48065 614 aa9.12□□□□□ -0.95
GNE-206ENST00000543356 KCNJ2P63252 427 aa9.12□□□□□ -0.95
GNE-206ENST00000543356 KLF10Q13118 480 aa9.12□□□□□ -0.95
GNE-206ENST00000543356 TDGQ13569 410 aa9.12□□□□□ -0.95
GNE-206ENST00000543356 BLMHQ13867 455 aa9.12□□□□□ -0.95
GNE-206ENST00000543356 IRF4Q15306 451 aa9.12□□□□□ -0.95
GNE-206ENST00000543356 SKIV2LQ15477 1246 aaKnown RBP9.12□□□□□ -0.95
GNE-206ENST00000543356 LRRC23Q53EV4 343 aaPredicted RBP9.12□□□□□ -0.95
GNE-206ENST00000543356 NXNQ6DKJ4 435 aa9.12□□□□□ -0.95
GNE-206ENST00000543356 TRAPPC5Q8IUR0 188 aa9.12□□□□□ -0.95
GNE-206ENST00000543356 ZNF547Q8IVP9 402 aa9.12□□□□□ -0.95
GNE-206ENST00000543356 TEX9Q8N6V9 391 aa9.12□□□□□ -0.95
GNE-206ENST00000543356 PHC3Q8NDX5 983 aa9.12□□□□□ -0.95
GNE-206ENST00000543356 HM13Q8TCT9 377 aa9.12□□□□□ -0.95
GNE-206ENST00000543356 MCOLN3Q8TDD5 553 aa9.12□□□□□ -0.95
GNE-206ENST00000543356 ASB12Q8WXK4 309 aa9.12□□□□□ -0.95
GNE-206ENST00000543356 CMTM5Q96DZ9 223 aa9.12□□□□□ -0.95
GNE-206ENST00000543356 SIPA1Q96FS4 1042 aa9.12□□□□□ -0.95
GNE-206ENST00000543356 RAB3IPQ96QF0 476 aaPredicted RBP9.12□□□□□ -0.95
GNE-206ENST00000543356 KCNA7Q96RP8 456 aa9.12□□□□□ -0.95
GNE-206ENST00000543356 BTBD10Q9BSF8 475 aa9.12□□□□□ -0.95
GNE-206ENST00000543356 C1QTNF7Q9BXJ2 289 aa9.12□□□□□ -0.95
GNE-206ENST00000543356 SLC6A17Q9H1V8 727 aa9.12□□□□□ -0.95
GNE-206ENST00000543356 NOL11Q9H8H0 719 aaKnown RBP9.12□□□□□ -0.95
GNE-206ENST00000543356 GULP1Q9UBP9 304 aa9.12□□□□□ -0.95
GNE-206ENST00000543356 NCKAP1Q9Y2A7 1128 aa9.12□□□□□ -0.95
GNE-206ENST00000543356 A0A1W2PQU0 124 aa9.11□□□□□ -0.95
GNE-206ENST00000543356 PIP5K1BO14986 540 aa9.11□□□□□ -0.95
GNE-206ENST00000543356 CCNT2O60583 730 aaKnown RBP9.11□□□□□ -0.95
GNE-206ENST00000543356 STK16O75716 305 aa9.11□□□□□ -0.95
GNE-206ENST00000543356 ATP6V1G2O95670 118 aa9.11□□□□□ -0.95
GNE-206ENST00000543356 PRDX3P30048 256 aaKnown RBP9.11□□□□□ -0.95
GNE-206ENST00000543356 TRIM23P36406 574 aa9.11□□□□□ -0.95
GNE-206ENST00000543356 PREPP48147 710 aa9.11□□□□□ -0.95
GNE-206ENST00000543356 ATP4BP51164 291 aa9.11□□□□□ -0.95
GNE-206ENST00000543356 ERVPABLB-1P60509 514 aa9.11□□□□□ -0.95
GNE-206ENST00000543356 TRAF3Q13114 568 aa9.11□□□□□ -0.95
GNE-206ENST00000543356 FGL2Q14314 439 aa9.11□□□□□ -0.95
GNE-206ENST00000543356 HERC3Q15034 1050 aa9.11□□□□□ -0.95
GNE-206ENST00000543356 SLC44A4Q53GD3 710 aa9.11□□□□□ -0.95
GNE-206ENST00000543356 XKR5Q6UX68 686 aa9.11□□□□□ -0.95
GNE-206ENST00000543356 MBOAT1Q6ZNC8 495 aa9.11□□□□□ -0.95
GNE-206ENST00000543356 RNF165Q6ZSG1 346 aa9.11□□□□□ -0.95
GNE-206ENST00000543356 LARP4Q71RC2 724 aaKnown RBP eCLIP9.11□□□□□ -0.95
GNE-206ENST00000543356 HORMAD1Q86X24 394 aa9.11□□□□□ -0.95
GNE-206ENST00000543356 KLHDC8AQ8IYD2 350 aa9.11□□□□□ -0.95
GNE-206ENST00000543356 KIF2BQ8N4N8 673 aa9.11□□□□□ -0.95
GNE-206ENST00000543356 OXR1Q8N573 874 aa9.11□□□□□ -0.95
GNE-206ENST00000543356 FBXO15Q8NCQ5 510 aaPredicted RBP9.11□□□□□ -0.95
GNE-206ENST00000543356 OR52B6Q8NGF0 335 aa9.11□□□□□ -0.95
GNE-206ENST00000543356 OR2L2Q8NH16 312 aa9.11□□□□□ -0.95
GNE-206ENST00000543356 OR14C36Q8NHC7 312 aa9.11□□□□□ -0.95
GNE-206ENST00000543356 FBXL8Q96CD0 374 aa9.11□□□□□ -0.95
GNE-206ENST00000543356 TUBB1Q9H4B7 451 aa9.11□□□□□ -0.95
GNE-206ENST00000543356 OCEL1Q9H607 264 aa9.11□□□□□ -0.95
GNE-206ENST00000543356 WDR26Q9H7D7 661 aa9.11□□□□□ -0.95
GNE-206ENST00000543356 IPPKQ9H8X2 491 aa9.11□□□□□ -0.95
GNE-206ENST00000543356 PFDN4Q9NQP4 134 aa9.11□□□□□ -0.95
GNE-206ENST00000543356 DNMT3AQ9Y6K1 912 aaPredicted RBP9.11□□□□□ -0.95
GNE-206ENST00000543356 MGAT4DA6NG13 374 aa9.11□□□□□ -0.95
GNE-206ENST00000543356 MAN2B1O00754 1011 aa9.11□□□□□ -0.95
GNE-206ENST00000543356 OR4F21O95013 312 aa9.11□□□□□ -0.95
GNE-206ENST00000543356 CATP04040 527 aaKnown RBP9.11□□□□□ -0.95
GNE-206ENST00000543356 PBLDP30039 288 aaPredicted RBP9.11□□□□□ -0.95
GNE-206ENST00000543356 SGCGQ13326 291 aa9.11□□□□□ -0.95
GNE-206ENST00000543356 SQLEQ14534 574 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms