RNA–Protein interactions for RNA: ENST00000543155.5

COPS7A-215, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-215ENST00000543155 ANXA5P08758 320 aa18.24■□□□□ 0.51
COPS7A-215ENST00000543155 CHRM1P11229 460 aaPredicted RBP18.24■□□□□ 0.51
COPS7A-215ENST00000543155 NFKBIAP25963 317 aa18.24■□□□□ 0.51
COPS7A-215ENST00000543155 ATN1P54259 1190 aaPredicted RBP18.24■□□□□ 0.51
COPS7A-215ENST00000543155 PRMT2P55345 433 aa18.24■□□□□ 0.51
COPS7A-215ENST00000543155 SNRPD1P62314 119 aaKnown RBP18.24■□□□□ 0.51
COPS7A-215ENST00000543155 SLC7A9P82251 487 aa18.24■□□□□ 0.51
COPS7A-215ENST00000543155 HMGCS1Q01581 520 aa18.24■□□□□ 0.51
COPS7A-215ENST00000543155 CYP4F3Q08477 520 aa18.24■□□□□ 0.51
COPS7A-215ENST00000543155 MAPKAPK3Q16644 382 aa18.24■□□□□ 0.51
COPS7A-215ENST00000543155 DEFB115Q30KQ5 88 aa18.24■□□□□ 0.51
COPS7A-215ENST00000543155 CDKL4Q5MAI5 379 aa18.24■□□□□ 0.51
COPS7A-215ENST00000543155 TTC23LQ6PF05 361 aa18.24■□□□□ 0.51
COPS7A-215ENST00000543155 EP400NLQ6ZTU2 488 aa18.24■□□□□ 0.51
COPS7A-215ENST00000543155 TPRG1Q6ZUI0 275 aa18.24■□□□□ 0.51
COPS7A-215ENST00000543155 USP51Q70EK9 711 aa18.24■□□□□ 0.51
COPS7A-215ENST00000543155 GPR141Q7Z602 305 aa18.24■□□□□ 0.51
COPS7A-215ENST00000543155 OR2T12Q8NG77 320 aa18.24■□□□□ 0.51
COPS7A-215ENST00000543155 GORASP2Q9H8Y8 452 aa18.24■□□□□ 0.51
COPS7A-215ENST00000543155 SPG21Q9NZD8 308 aa18.24■□□□□ 0.51
COPS7A-215ENST00000543155 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.24■□□□□ 0.51
COPS7A-215ENST00000543155 PIKFYVEQ9Y2I7 2098 aa18.23■□□□□ 0.51
COPS7A-215ENST00000543155 H0YAE9 185 aa18.23■□□□□ 0.51
COPS7A-215ENST00000543155 GSTA4O15217 222 aa18.23■□□□□ 0.51
COPS7A-215ENST00000543155 SEC22BO75396 215 aa18.23■□□□□ 0.51
COPS7A-215ENST00000543155 PRSS23O95084 383 aa18.23■□□□□ 0.51
COPS7A-215ENST00000543155 ADARB1P78563 741 aaKnown RBP18.23■□□□□ 0.51
COPS7A-215ENST00000543155 PLIN5Q00G26 463 aa18.23■□□□□ 0.51
COPS7A-215ENST00000543155 CHRNB3Q05901 458 aa18.23■□□□□ 0.51
COPS7A-215ENST00000543155 ARHGEF7Q14155 803 aa18.23■□□□□ 0.51
COPS7A-215ENST00000543155 ARHGEF6Q15052 776 aa18.23■□□□□ 0.51
COPS7A-215ENST00000543155 SGO1Q5FBB7 561 aa18.23■□□□□ 0.51
COPS7A-215ENST00000543155 LRRC66Q68CR7 880 aa18.23■□□□□ 0.51
COPS7A-215ENST00000543155 MBOAT1Q6ZNC8 495 aa18.23■□□□□ 0.51
COPS7A-215ENST00000543155 USP45Q70EL2 814 aa18.23■□□□□ 0.51
COPS7A-215ENST00000543155 ANKRD33Q7Z3H0 272 aa18.23■□□□□ 0.51
COPS7A-215ENST00000543155 ERI1Q8IV48 349 aaKnown RBP18.23■□□□□ 0.51
COPS7A-215ENST00000543155 RGL4Q8IZJ4 473 aa18.23■□□□□ 0.51
COPS7A-215ENST00000543155 ZNF689Q96CS4 500 aaPredicted RBP18.23■□□□□ 0.51
COPS7A-215ENST00000543155 ASIC4Q96FT7 647 aa18.23■□□□□ 0.51
COPS7A-215ENST00000543155 SH3GL1Q99961 368 aa18.23■□□□□ 0.51
COPS7A-215ENST00000543155 UGT2B28Q9BY64 529 aa18.23■□□□□ 0.51
COPS7A-215ENST00000543155 CLMPQ9H6B4 373 aa18.23■□□□□ 0.51
COPS7A-215ENST00000543155 NTN4Q9HB63 628 aa18.23■□□□□ 0.51
COPS7A-215ENST00000543155 ZFP14Q9HCL3 533 aa18.23■□□□□ 0.51
COPS7A-215ENST00000543155 INTS6Q9UL03 887 aaKnown RBP18.23■□□□□ 0.51
COPS7A-215ENST00000543155 AP3M1Q9Y2T2 418 aa18.23■□□□□ 0.51
COPS7A-215ENST00000543155 CXorf51AA0A1B0GTR3 108 aa18.23■□□□□ 0.51
COPS7A-215ENST00000543155 A0A1B0GVG6 124 aa18.23■□□□□ 0.51
COPS7A-215ENST00000543155 EIF3FO00303 357 aaPredicted RBP18.23■□□□□ 0.51
COPS7A-215ENST00000543155 CLDN9O95484 217 aa18.23■□□□□ 0.51
COPS7A-215ENST00000543155 SNAP29O95721 258 aa18.23■□□□□ 0.51
COPS7A-215ENST00000543155 CLIC3O95833 236 aa18.23■□□□□ 0.51
COPS7A-215ENST00000543155 SRCP12931 536 aa18.23■□□□□ 0.51
COPS7A-215ENST00000543155 LAG3P18627 525 aa18.23■□□□□ 0.51
COPS7A-215ENST00000543155 PLA2G4EQ3MJ16 856 aa18.23■□□□□ 0.51
COPS7A-215ENST00000543155 TBPL2Q6SJ96 375 aa18.23■□□□□ 0.51
COPS7A-215ENST00000543155 OFCC1Q8IZS5 231 aa18.23■□□□□ 0.51
COPS7A-215ENST00000543155 SCRN2Q96FV2 425 aa18.23■□□□□ 0.51
COPS7A-215ENST00000543155 COPS8Q99627 209 aa18.23■□□□□ 0.51
COPS7A-215ENST00000543155 C1orf109Q9NX04 203 aa18.23■□□□□ 0.51
COPS7A-215ENST00000543155 KRT6AP02538 564 aa18.22■□□□□ 0.51
COPS7A-215ENST00000543155 KRT6BP04259 564 aa18.22■□□□□ 0.51
COPS7A-215ENST00000543155 PGRP06401 933 aa18.22■□□□□ 0.51
COPS7A-215ENST00000543155 KRT6CP48668 564 aa18.22■□□□□ 0.51
COPS7A-215ENST00000543155 ZBED5Q49AG3 693 aa18.22■□□□□ 0.51
COPS7A-215ENST00000543155 SPANXN4Q5MJ08 99 aa18.22■□□□□ 0.51
COPS7A-215ENST00000543155 GAREM2Q75VX8 874 aa18.22■□□□□ 0.51
COPS7A-215ENST00000543155 ZNF548Q8NEK5 533 aaPredicted RBP18.22■□□□□ 0.51
COPS7A-215ENST00000543155 FIG4Q92562 907 aa18.22■□□□□ 0.51
COPS7A-215ENST00000543155 ECHDC3Q96DC8 303 aa18.22■□□□□ 0.51
COPS7A-215ENST00000543155 THUMPD3Q9BV44 507 aaKnown RBP18.22■□□□□ 0.51
COPS7A-215ENST00000543155 YTHDF1Q9BYJ9 559 aaKnown RBP18.22■□□□□ 0.51
COPS7A-215ENST00000543155 PPIL1Q9Y3C6 166 aa18.22■□□□□ 0.51
COPS7A-215ENST00000543155 CROCCQ5TZA2 2017 aa18.22■□□□□ 0.51
COPS7A-215ENST00000543155 LTBP2Q14767 1821 aa18.22■□□□□ 0.51
COPS7A-215ENST00000543155 UPK1AO00322 258 aa18.22■□□□□ 0.51
COPS7A-215ENST00000543155 TEX28O15482 410 aa18.22■□□□□ 0.51
COPS7A-215ENST00000543155 ALBP02768 609 aa18.22■□□□□ 0.51
COPS7A-215ENST00000543155 ALDH3A2P51648 485 aa18.22■□□□□ 0.51
COPS7A-215ENST00000543155 SEMG2Q02383 582 aa18.22■□□□□ 0.51
COPS7A-215ENST00000543155 USP39Q53GS9 565 aaKnown RBP18.22■□□□□ 0.51
COPS7A-215ENST00000543155 TMEM214Q6NUQ4 689 aaKnown RBP18.22■□□□□ 0.51
COPS7A-215ENST00000543155 SUSD1Q6UWL2 747 aa18.22■□□□□ 0.51
COPS7A-215ENST00000543155 LRRC70Q7Z2Q7 622 aa18.22■□□□□ 0.51
COPS7A-215ENST00000543155 TMBIM1Q969X1 311 aa18.22■□□□□ 0.51
COPS7A-215ENST00000543155 VOPP1Q96AW1 172 aa18.22■□□□□ 0.51
COPS7A-215ENST00000543155 SLC32A1Q9H598 525 aa18.22■□□□□ 0.51
COPS7A-215ENST00000543155 ACTR8Q9H981 624 aa18.22■□□□□ 0.51
COPS7A-215ENST00000543155 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.22■□□□□ 0.51
COPS7A-215ENST00000543155 ARL15Q9NXU5 204 aa18.22■□□□□ 0.51
COPS7A-215ENST00000543155 PKD2L2Q9NZM6 624 aa18.22■□□□□ 0.51
COPS7A-215ENST00000543155 PCDHGA11Q9Y5H2 935 aa18.22■□□□□ 0.51
COPS7A-215ENST00000543155 OR56A5P0C7T3 313 aa18.21■□□□□ 0.51
COPS7A-215ENST00000543155 GGT5P36269 586 aa18.21■□□□□ 0.51
COPS7A-215ENST00000543155 CTSOP43234 321 aaPredicted RBP18.21■□□□□ 0.51
COPS7A-215ENST00000543155 RPIAP49247 311 aa18.21■□□□□ 0.51
COPS7A-215ENST00000543155 STK19P49842 368 aaPredicted RBP18.21■□□□□ 0.51
COPS7A-215ENST00000543155 ARSFP54793 590 aa18.21■□□□□ 0.51
COPS7A-215ENST00000543155 DAG1Q14118 895 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms