RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 RECQL5O94762 991 aaPredicted RBP3.14□□□□□ -1.91
USP28-210ENST00000542033 SLU7O95391 586 aaKnown RBP3.14□□□□□ -1.91
USP28-210ENST00000542033 TSPY4P0CV99 314 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 TSPY10P0CW01 314 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 FDPSP14324 419 aaKnown RBP3.14□□□□□ -1.91
USP28-210ENST00000542033 MMP9P14780 707 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 ERCC2P18074 760 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 S1PR1P21453 382 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 IL4RP24394 825 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 ACADLP28330 430 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 CORO1AP31146 461 aaKnown RBP3.14□□□□□ -1.91
USP28-210ENST00000542033 MATR3P43243 847 aaKnown RBP eCLIP3.14□□□□□ -1.91
USP28-210ENST00000542033 FNTAP49354 379 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 AMPHP49418 695 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 RGS19P49795 217 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 CCR3P51677 355 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 ARSEP51690 589 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 ERVFC1-1P60608 527 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 RELQ04864 619 aaPredicted RBP3.14□□□□□ -1.91
USP28-210ENST00000542033 CXCL9Q07325 125 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 IL11RAQ14626 422 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 SLMAPQ14BN4 828 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 DECR1Q16698 335 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 CCDC14Q49A88 953 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 IGSF11Q5DX21 431 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 LRIF1Q5T3J3 769 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 WBP2NLQ6ICG8 309 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 ERN2Q76MJ5 926 aaKnown RBP3.14□□□□□ -1.91
USP28-210ENST00000542033 NR2C2APQ86WQ0 139 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 KMT5CQ86Y97 462 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 NAGSQ8N159 534 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 TMCO5AQ8N6Q1 288 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 TEX9Q8N6V9 391 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 RBMXL3Q8N7X1 1067 aaKnown RBP3.14□□□□□ -1.91
USP28-210ENST00000542033 ZNF441Q8N8Z8 693 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 TC2NQ8N9U0 490 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 ZBTB8BQ8NAP8 495 aaPredicted RBP3.14□□□□□ -1.91
USP28-210ENST00000542033 XXYLT1Q8NBI6 393 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 POC1AQ8NBT0 407 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 ZNF397Q8NF99 534 aaPredicted RBP3.14□□□□□ -1.91
USP28-210ENST00000542033 CTCFLQ8NI51 663 aaPredicted RBP3.14□□□□□ -1.91
USP28-210ENST00000542033 GDAP1Q8TB36 358 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 HMGCLL1Q8TB92 370 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 SETD6Q8TBK2 473 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 SUN5Q8TC36 379 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 TRPC4APQ8TEL6 797 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 SLC20A1Q8WUM9 679 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 ZFAND2BQ8WV99 257 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 ARHGAP45Q92619 1136 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 ABTB1Q969K4 478 aaPredicted RBP3.14□□□□□ -1.91
USP28-210ENST00000542033 PIGTQ969N2 578 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 PTERQ96BW5 349 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 HDAC11Q96DB2 347 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 ARSGQ96EG1 525 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 FER1L6-AS2Q96M78 137 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 CEP295NLQ96MC4 621 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 GPATCH1Q9BRR8 931 aaKnown RBP3.14□□□□□ -1.91
USP28-210ENST00000542033 NAA11Q9BSU3 229 aaPredicted RBP3.14□□□□□ -1.91
USP28-210ENST00000542033 SLC25A23Q9BV35 468 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 TSGA10Q9BZW7 698 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 SPRY4Q9C004 299 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 XPO4Q9C0E2 1151 aaKnown RBP3.14□□□□□ -1.91
USP28-210ENST00000542033 ANKRD2Q9GZV1 360 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 MMP27Q9H306 513 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 MMADHCQ9H3L0 296 aaPredicted RBP3.14□□□□□ -1.91
USP28-210ENST00000542033 PIGMQ9H3S5 423 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 MAGIXQ9H6Y5 334 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 EVA1AQ9H8M9 152 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 PANK3Q9H999 370 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 EBF2Q9HAK2 575 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 MBNL1Q9NR56 388 aaKnown RBP3.14□□□□□ -1.91
USP28-210ENST00000542033 TBC1D7Q9P0N9 293 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 MTRRQ9UBK8 725 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 PLAGL1Q9UM63 463 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 TRAF3IP3Q9Y228 551 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 TMED5Q9Y3A6 229 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 PTPRCP08575 1304 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 CKAP5Q14008 2032 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 RRBP1Q9P2E9 1410 aaKnown RBP3.13□□□□□ -1.91
USP28-210ENST00000542033 YEATS2Q9ULM3 1422 aa3.13□□□□□ -1.91
USP28-210ENST00000542033 A0A1B0GUV1 79 aa3.13□□□□□ -1.91
USP28-210ENST00000542033 A0A1W2PR77 199 aa3.13□□□□□ -1.91
USP28-210ENST00000542033 GOLGA6L4A6NEF3 574 aa3.13□□□□□ -1.91
USP28-210ENST00000542033 TRIM64A6NGJ6 449 aa3.13□□□□□ -1.91
USP28-210ENST00000542033 TRIM64BA6NI03 449 aa3.13□□□□□ -1.91
USP28-210ENST00000542033 LILRA5A6NI73 299 aa3.13□□□□□ -1.91
USP28-210ENST00000542033 PRAC2D3DTV9 90 aa3.13□□□□□ -1.91
USP28-210ENST00000542033 ZNF587BE7ETH6 402 aa3.13□□□□□ -1.91
USP28-210ENST00000542033 H0YC42 278 aa3.13□□□□□ -1.91
USP28-210ENST00000542033 M0QX08 132 aa3.13□□□□□ -1.91
USP28-210ENST00000542033 KCNN4O15554 427 aa3.13□□□□□ -1.91
USP28-210ENST00000542033 LDB3O75112 727 aa3.13□□□□□ -1.91
USP28-210ENST00000542033 CAMTA2O94983 1202 aa3.13□□□□□ -1.91
USP28-210ENST00000542033 MYOD1P15172 320 aa3.13□□□□□ -1.91
USP28-210ENST00000542033 ANXA7P20073 488 aaKnown RBP3.13□□□□□ -1.91
USP28-210ENST00000542033 CD9P21926 228 aa3.13□□□□□ -1.91
USP28-210ENST00000542033 DGKAP23743 735 aa3.13□□□□□ -1.91
USP28-210ENST00000542033 HOXC8P31273 242 aa3.13□□□□□ -1.91
USP28-210ENST00000542033 KIF5BP33176 963 aa3.13□□□□□ -1.91
USP28-210ENST00000542033 TCF7P36402 384 aaPredicted RBP3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms