RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 RETREG1Q9H6L5 497 aa10.23□□□□□ -0.77
CHFR-219ENST00000541341 GORASP2Q9H8Y8 452 aa10.23□□□□□ -0.77
CHFR-219ENST00000541341 TREX1Q9NSU2 369 aa10.23□□□□□ -0.77
CHFR-219ENST00000541341 SEMA4GQ9NTN9 838 aa10.23□□□□□ -0.77
CHFR-219ENST00000541341 FAM49BQ9NUQ9 324 aa10.23□□□□□ -0.77
CHFR-219ENST00000541341 TMEM30AQ9NV96 361 aa10.23□□□□□ -0.77
CHFR-219ENST00000541341 NPAP1Q9NZP6 1156 aa10.23□□□□□ -0.77
CHFR-219ENST00000541341 SPATA7Q9P0W8 599 aa10.23□□□□□ -0.77
CHFR-219ENST00000541341 ANKMY1Q9P2S6 941 aa10.23□□□□□ -0.77
CHFR-219ENST00000541341 WARS2Q9UGM6 360 aaKnown RBP10.23□□□□□ -0.77
CHFR-219ENST00000541341 ENPP5Q9UJA9 477 aa10.23□□□□□ -0.77
CHFR-219ENST00000541341 IFT52Q9Y366 437 aa10.23□□□□□ -0.77
CHFR-219ENST00000541341 COMMD10Q9Y6G5 202 aa10.23□□□□□ -0.77
CHFR-219ENST00000541341 NCOR2Q9Y618 2525 aa10.23□□□□□ -0.77
CHFR-219ENST00000541341 KMT2BQ9UMN6 2715 aaPredicted RBP10.22□□□□□ -0.77
CHFR-219ENST00000541341 K7ESF4 209 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 KCNK1O00180 336 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 NR5A2O00482 541 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 NME4O00746 187 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 STX16O14662 325 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 EI24O14681 340 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 ACOX3O15254 700 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 INPP4BO15327 924 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 SLC22A3O75751 556 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 SCELO95171 688 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 JCHAINP01591 159 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 ANXA6P08133 673 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 SLC2A3P11169 496 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 OGNP20774 298 aaKnown RBP10.22□□□□□ -0.77
CHFR-219ENST00000541341 ATP6V1B2P21281 511 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 CD9P21926 228 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 ADORA2BP29275 332 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 CTHP32929 405 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 MSX2P35548 267 aaPredicted RBP10.22□□□□□ -0.77
CHFR-219ENST00000541341 TUFMP49411 452 aaKnown RBP10.22□□□□□ -0.77
CHFR-219ENST00000541341 CXCR3P49682 368 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 ST13P50502 369 aaKnown RBP10.22□□□□□ -0.77
CHFR-219ENST00000541341 EPHA5P54756 1037 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 ARSFP54793 590 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 TAS2R39P59534 338 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 NRG1Q02297 640 aaPredicted RBP10.22□□□□□ -0.77
CHFR-219ENST00000541341 EMX2Q04743 252 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 LCP2Q13094 533 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 ATP1A4Q13733 1029 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 RCAN2Q14206 197 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 CSHL1Q14406 222 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 SF3A2Q15428 464 aaKnown RBP10.22□□□□□ -0.77
CHFR-219ENST00000541341 DLG2Q15700 870 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 FGD3Q5JSP0 725 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 RAB41Q5JT25 222 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 BTBD8Q5XKL5 378 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 KANK2Q63ZY3 851 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 ANKS6Q68DC2 871 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 ZNF470Q6ECI4 717 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 PM20D1Q6GTS8 502 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 LAIR1Q6GTX8 287 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 GALNT18Q6P9A2 607 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 CNSTQ6PJW8 725 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 TMEM26Q6ZUK4 368 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 DNAJB7Q7Z6W7 309 aaPredicted RBP10.22□□□□□ -0.77
CHFR-219ENST00000541341 ADCK1Q86TW2 530 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 PIGZQ86VD9 579 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 EID3Q8N140 333 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 ZCCHC7Q8N3Z6 543 aaKnown RBP10.22□□□□□ -0.77
CHFR-219ENST00000541341 CARNMT1Q8N4J0 409 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 FAM160A2Q8N612 972 aaPredicted RBP10.22□□□□□ -0.77
CHFR-219ENST00000541341 ZMIZ2Q8NF64 920 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 ABHD11Q8NFV4 315 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 GPR150Q8NGU9 434 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 BPIFB1Q8TDL5 484 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 IPCEF1Q8WWN9 437 aaPredicted RBP10.22□□□□□ -0.77
CHFR-219ENST00000541341 STARD8Q92502 1023 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 RORBQ92753 470 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 TBC1D20Q96BZ9 403 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 TUBGCP3Q96CW5 907 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 PIWIL1Q96J94 861 aaKnown RBP10.22□□□□□ -0.77
CHFR-219ENST00000541341 SPATA17Q96L03 361 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 NODALQ96S42 347 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 SMOQ99835 787 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 OMDQ99983 421 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 HGH1Q9BTY7 390 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 MLPHQ9BV36 600 aaPredicted RBP10.22□□□□□ -0.77
CHFR-219ENST00000541341 C1QTNF3Q9BXJ4 246 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 BRINP2Q9C0B6 783 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 GSTO2Q9H4Y5 243 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 FANCEQ9HB96 536 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 RXFP3Q9NSD7 469 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 IGSF5Q9NSI5 407 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 PAK1IP1Q9NWT1 392 aaPredicted RBP10.22□□□□□ -0.77
CHFR-219ENST00000541341 TRNAU1APQ9NX07 287 aaKnown RBP10.22□□□□□ -0.77
CHFR-219ENST00000541341 RALYQ9UKM9 306 aaKnown RBP10.22□□□□□ -0.77
CHFR-219ENST00000541341 PCDHGB4Q9UN71 923 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 ERVK-11Q9UQG0 969 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 TDRKHQ9Y2W6 561 aaKnown RBP10.22□□□□□ -0.77
CHFR-219ENST00000541341 PCDHGB5Q9Y5G0 923 aa10.22□□□□□ -0.77
CHFR-219ENST00000541341 FAM92AA1XBS5 289 aa10.21□□□□□ -0.77
CHFR-219ENST00000541341 ZNF99A8MXY4 864 aaPredicted RBP10.21□□□□□ -0.77
CHFR-219ENST00000541341 HHLA1C9JL84 531 aa10.21□□□□□ -0.77
CHFR-219ENST00000541341 G3V2T6 193 aa10.21□□□□□ -0.77
CHFR-219ENST00000541341 BOLA2-SMG1P6H3BVE0 249 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms