RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 CEP19Q96LK0 163 aa9.37□□□□□ -0.91
TTC39C-203ENST00000540918 TMEM245Q9H330 911 aa9.37□□□□□ -0.91
TTC39C-203ENST00000540918 IL26Q9NPH9 171 aa9.37□□□□□ -0.91
TTC39C-203ENST00000540918 ADGRE2Q9UHX3 823 aa9.37□□□□□ -0.91
TTC39C-203ENST00000540918 CA14Q9ULX7 337 aa9.37□□□□□ -0.91
TTC39C-203ENST00000540918 N6AMT1Q9Y5N5 214 aa9.37□□□□□ -0.91
TTC39C-203ENST00000540918 VPS4BO75351 444 aa9.36□□□□□ -0.91
TTC39C-203ENST00000540918 ACADSP16219 412 aa9.36□□□□□ -0.91
TTC39C-203ENST00000540918 XRCC1P18887 633 aaPredicted RBP9.36□□□□□ -0.91
TTC39C-203ENST00000540918 GNAZP19086 355 aa9.36□□□□□ -0.91
TTC39C-203ENST00000540918 PPP2R1BP30154 601 aa9.36□□□□□ -0.91
TTC39C-203ENST00000540918 RYKP34925 604 aa9.36□□□□□ -0.91
TTC39C-203ENST00000540918 BUD31P41223 144 aaPredicted RBP9.36□□□□□ -0.91
TTC39C-203ENST00000540918 OR4D1Q15615 310 aa9.36□□□□□ -0.91
TTC39C-203ENST00000540918 ITPRIPL2Q3MIP1 535 aa9.36□□□□□ -0.91
TTC39C-203ENST00000540918 IER5LQ5T953 404 aa9.36□□□□□ -0.91
TTC39C-203ENST00000540918 SLC2A7Q6PXP3 512 aa9.36□□□□□ -0.91
TTC39C-203ENST00000540918 GALNT10Q86SR1 603 aa9.36□□□□□ -0.91
TTC39C-203ENST00000540918 PGBD5Q8N414 524 aa9.36□□□□□ -0.91
TTC39C-203ENST00000540918 OR4A15Q8NGL6 344 aa9.36□□□□□ -0.91
TTC39C-203ENST00000540918 MAPK15Q8TD08 544 aa9.36□□□□□ -0.91
TTC39C-203ENST00000540918 FOXJ1Q92949 421 aa9.36□□□□□ -0.91
TTC39C-203ENST00000540918 TOX2Q96NM4 488 aa9.36□□□□□ -0.91
TTC39C-203ENST00000540918 BDH2Q9BUT1 245 aa9.36□□□□□ -0.91
TTC39C-203ENST00000540918 KLF16Q9BXK1 252 aaPredicted RBP9.36□□□□□ -0.91
TTC39C-203ENST00000540918 DGCR6LQ9BY27 220 aa9.36□□□□□ -0.91
TTC39C-203ENST00000540918 NLNQ9BYT8 704 aa9.36□□□□□ -0.91
TTC39C-203ENST00000540918 MICAL3Q7RTP6 2002 aa9.36□□□□□ -0.91
TTC39C-203ENST00000540918 SLC28A1O00337 649 aa9.36□□□□□ -0.91
TTC39C-203ENST00000540918 SGTAO43765 313 aa9.36□□□□□ -0.91
TTC39C-203ENST00000540918 PFDN1O60925 122 aa9.36□□□□□ -0.91
TTC39C-203ENST00000540918 TGDSO95455 350 aa9.36□□□□□ -0.91
TTC39C-203ENST00000540918 G6PDP11413 515 aa9.36□□□□□ -0.91
TTC39C-203ENST00000540918 CKMT2P17540 419 aa9.36□□□□□ -0.91
TTC39C-203ENST00000540918 VIPR1P32241 457 aa9.36□□□□□ -0.91
TTC39C-203ENST00000540918 GRB7Q14451 532 aa9.36□□□□□ -0.91
TTC39C-203ENST00000540918 PON2Q15165 354 aa9.36□□□□□ -0.91
TTC39C-203ENST00000540918 GATAD2AQ86YP4 633 aa9.36□□□□□ -0.91
TTC39C-203ENST00000540918 RAD51AP1Q96B01 352 aa9.36□□□□□ -0.91
TTC39C-203ENST00000540918 PGAP3Q96FM1 320 aaPredicted RBP9.36□□□□□ -0.91
TTC39C-203ENST00000540918 DDX18Q9NVP1 670 aaKnown RBP9.36□□□□□ -0.91
TTC39C-203ENST00000540918 NLE1Q9NVX2 485 aaPredicted RBP9.36□□□□□ -0.91
TTC39C-203ENST00000540918 CYP8B1Q9UNU6 501 aa9.36□□□□□ -0.91
TTC39C-203ENST00000540918 POMPQ9Y244 141 aa9.36□□□□□ -0.91
TTC39C-203ENST00000540918 CACNA1EQ15878 2313 aa9.36□□□□□ -0.91
TTC39C-203ENST00000540918 OR10H2O60403 315 aa9.36□□□□□ -0.91
TTC39C-203ENST00000540918 CST1P01037 141 aa9.36□□□□□ -0.91
TTC39C-203ENST00000540918 OPN1SWP03999 348 aa9.36□□□□□ -0.91
TTC39C-203ENST00000540918 CDH2P19022 906 aaPredicted RBP9.36□□□□□ -0.91
TTC39C-203ENST00000540918 CDH3P22223 829 aa9.36□□□□□ -0.91
TTC39C-203ENST00000540918 PEX2P28328 305 aa9.36□□□□□ -0.91
TTC39C-203ENST00000540918 GCAP28676 217 aa9.36□□□□□ -0.91
TTC39C-203ENST00000540918 LSM3P62310 102 aaKnown RBP9.36□□□□□ -0.91
TTC39C-203ENST00000540918 TJAP1Q5JTD0 557 aa9.36□□□□□ -0.91
TTC39C-203ENST00000540918 SULT1C3Q6IMI6 304 aa9.36□□□□□ -0.91
TTC39C-203ENST00000540918 TMEM214Q6NUQ4 689 aaKnown RBP9.36□□□□□ -0.91
TTC39C-203ENST00000540918 TNFAIP8L2Q6P589 184 aaPredicted RBP9.36□□□□□ -0.91
TTC39C-203ENST00000540918 CRTC1Q6UUV9 634 aa9.36□□□□□ -0.91
TTC39C-203ENST00000540918 CEP68Q76N32 757 aa9.36□□□□□ -0.91
TTC39C-203ENST00000540918 FAM20CQ8IXL6 584 aa9.36□□□□□ -0.91
TTC39C-203ENST00000540918 GPR26Q8NDV2 337 aa9.36□□□□□ -0.91
TTC39C-203ENST00000540918 TNIP2Q8NFZ5 429 aa9.36□□□□□ -0.91
TTC39C-203ENST00000540918 FBXO27Q8NI29 283 aa9.36□□□□□ -0.91
TTC39C-203ENST00000540918 SLC9A6Q92581 669 aa9.36□□□□□ -0.91
TTC39C-203ENST00000540918 KAT2AQ92830 837 aa9.36□□□□□ -0.91
TTC39C-203ENST00000540918 HHIPL1Q96JK4 782 aa9.36□□□□□ -0.91
TTC39C-203ENST00000540918 PRICKLE1Q96MT3 831 aaPredicted RBP9.36□□□□□ -0.91
TTC39C-203ENST00000540918 TFB2MQ9H5Q4 396 aaKnown RBP9.36□□□□□ -0.91
TTC39C-203ENST00000540918 SSU72Q9NP77 194 aaKnown RBP9.36□□□□□ -0.91
TTC39C-203ENST00000540918 NUDT4Q9NZJ9 180 aa9.36□□□□□ -0.91
TTC39C-203ENST00000540918 COL24A1Q17RW2 1714 aa9.36□□□□□ -0.91
TTC39C-203ENST00000540918 DOCK5Q9H7D0 1870 aa9.36□□□□□ -0.91
TTC39C-203ENST00000540918 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.35□□□□□ -0.91
TTC39C-203ENST00000540918 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.35□□□□□ -0.91
TTC39C-203ENST00000540918 H7BY64 318 aa9.35□□□□□ -0.91
TTC39C-203ENST00000540918 hCG_2039718K7EN88 272 aa9.35□□□□□ -0.91
TTC39C-203ENST00000540918 QSOX1O00391 747 aa9.35□□□□□ -0.91
TTC39C-203ENST00000540918 LY75O60449 1722 aa9.35□□□□□ -0.91
TTC39C-203ENST00000540918 KERAO60938 352 aa9.35□□□□□ -0.91
TTC39C-203ENST00000540918 CLPTM1O96005 669 aa9.35□□□□□ -0.91
TTC39C-203ENST00000540918 C8orf89P0DMQ9 161 aa9.35□□□□□ -0.91
TTC39C-203ENST00000540918 PRDX3P30048 256 aaKnown RBP9.35□□□□□ -0.91
TTC39C-203ENST00000540918 CLK1P49759 484 aaKnown RBP9.35□□□□□ -0.91
TTC39C-203ENST00000540918 RUNX3Q13761 415 aa9.35□□□□□ -0.91
TTC39C-203ENST00000540918 SIM2Q14190 667 aaPredicted RBP9.35□□□□□ -0.91
TTC39C-203ENST00000540918 GPR33Q49SQ1 333 aa9.35□□□□□ -0.91
TTC39C-203ENST00000540918 FAM109BQ6ICB4 259 aaPredicted RBP9.35□□□□□ -0.91
TTC39C-203ENST00000540918 DEF8Q6ZN54 512 aa9.35□□□□□ -0.91
TTC39C-203ENST00000540918 CYP4V2Q6ZWL3 525 aaPredicted RBP9.35□□□□□ -0.91
TTC39C-203ENST00000540918 ZNF534Q76KX8 674 aa9.35□□□□□ -0.91
TTC39C-203ENST00000540918 SLC22A15Q8IZD6 547 aa9.35□□□□□ -0.91
TTC39C-203ENST00000540918 C1orf52Q8N6N3 182 aaKnown RBP9.35□□□□□ -0.91
TTC39C-203ENST00000540918 BPIFB6Q8NFQ5 453 aa9.35□□□□□ -0.91
TTC39C-203ENST00000540918 TMEM174Q8WUU8 243 aa9.35□□□□□ -0.91
TTC39C-203ENST00000540918 RERGQ96A58 199 aaPredicted RBP9.35□□□□□ -0.91
TTC39C-203ENST00000540918 ABHD8Q96I13 439 aa9.35□□□□□ -0.91
TTC39C-203ENST00000540918 PRAP1Q96NZ9 151 aa9.35□□□□□ -0.91
TTC39C-203ENST00000540918 UHRF1Q96T88 793 aaPredicted RBP9.35□□□□□ -0.91
TTC39C-203ENST00000540918 BRINP2Q9C0B6 783 aa9.35□□□□□ -0.91
TTC39C-203ENST00000540918 SUFUQ9UMX1 484 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms