RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 DET1Q7L5Y6 550 aa7.06□□□□□ -1.28
YBX3-209ENST00000540747 GLT6D1Q7Z4J2 308 aa7.06□□□□□ -1.28
YBX3-209ENST00000540747 ZNF567Q8N184 647 aa7.06□□□□□ -1.28
YBX3-209ENST00000540747 SPC24Q8NBT2 197 aa7.06□□□□□ -1.28
YBX3-209ENST00000540747 CLEC1AQ8NC01 280 aa7.06□□□□□ -1.28
YBX3-209ENST00000540747 OR52E1Q8NGJ3 308 aa7.06□□□□□ -1.28
YBX3-209ENST00000540747 PROKR1Q8TCW9 393 aa7.06□□□□□ -1.28
YBX3-209ENST00000540747 ZNF398Q8TD17 642 aa7.06□□□□□ -1.28
YBX3-209ENST00000540747 BLOC1S5Q8TDH9 187 aa7.06□□□□□ -1.28
YBX3-209ENST00000540747 PPP4R1Q8TF05 950 aa7.06□□□□□ -1.28
YBX3-209ENST00000540747 LCN9Q8WX39 176 aa7.06□□□□□ -1.28
YBX3-209ENST00000540747 MARVELD3Q96A59 401 aa7.06□□□□□ -1.28
YBX3-209ENST00000540747 NACC2Q96BF6 587 aa7.06□□□□□ -1.28
YBX3-209ENST00000540747 C19orf43Q9BQ61 176 aa7.06□□□□□ -1.28
YBX3-209ENST00000540747 SLX1AQ9BQ83 275 aa7.06□□□□□ -1.28
YBX3-209ENST00000540747 WDR77Q9BQA1 342 aaPredicted RBP7.06□□□□□ -1.28
YBX3-209ENST00000540747 C17orf62Q9BQA9 187 aa7.06□□□□□ -1.28
YBX3-209ENST00000540747 TRIM56Q9BRZ2 755 aaKnown RBP7.06□□□□□ -1.28
YBX3-209ENST00000540747 CCM2Q9BSQ5 444 aa7.06□□□□□ -1.28
YBX3-209ENST00000540747 UNKQ9C0B0 810 aaKnown RBP7.06□□□□□ -1.28
YBX3-209ENST00000540747 NAT10Q9H0A0 1025 aaKnown RBP7.06□□□□□ -1.28
YBX3-209ENST00000540747 ILKAPQ9H0C8 392 aaPredicted RBP7.06□□□□□ -1.28
YBX3-209ENST00000540747 KLHL25Q9H0H3 589 aa7.06□□□□□ -1.28
YBX3-209ENST00000540747 SRMSQ9H3Y6 488 aa7.06□□□□□ -1.28
YBX3-209ENST00000540747 COG4Q9H9E3 785 aa7.06□□□□□ -1.28
YBX3-209ENST00000540747 ENAMQ9NRM1 1142 aa7.06□□□□□ -1.28
YBX3-209ENST00000540747 MAP10Q9P2G4 905 aa7.06□□□□□ -1.28
YBX3-209ENST00000540747 SAE1Q9UBE0 346 aaPredicted RBP7.06□□□□□ -1.28
YBX3-209ENST00000540747 SERTAD3Q9UJW9 196 aa7.06□□□□□ -1.28
YBX3-209ENST00000540747 NOVA2Q9UNW9 492 aaKnown RBP7.06□□□□□ -1.28
YBX3-209ENST00000540747 HEBP2Q9Y5Z4 205 aa7.06□□□□□ -1.28
YBX3-209ENST00000540747 ARL5AQ9Y689 179 aa7.06□□□□□ -1.28
YBX3-209ENST00000540747 COLEC10Q9Y6Z7 277 aa7.06□□□□□ -1.28
YBX3-209ENST00000540747 NUP210LQ5VU65 1888 aa7.05□□□□□ -1.28
YBX3-209ENST00000540747 TRBV5-4A0A0C4DH59 114 aa7.05□□□□□ -1.28
YBX3-209ENST00000540747 GSAPA4D1B5 854 aa7.05□□□□□ -1.28
YBX3-209ENST00000540747 SMTNL1A8MU46 457 aa7.05□□□□□ -1.28
YBX3-209ENST00000540747 F5H423 210 aaPredicted RBP7.05□□□□□ -1.28
YBX3-209ENST00000540747 LRRTM2O43300 516 aa7.05□□□□□ -1.28
YBX3-209ENST00000540747 KLHL41O60662 606 aa7.05□□□□□ -1.28
YBX3-209ENST00000540747 SRP72O76094 671 aaKnown RBP7.05□□□□□ -1.28
YBX3-209ENST00000540747 KRT1P04264 644 aa7.05□□□□□ -1.28
YBX3-209ENST00000540747 POLBP06746 335 aa7.05□□□□□ -1.28
YBX3-209ENST00000540747 STSP08842 583 aa7.05□□□□□ -1.28
YBX3-209ENST00000540747 TPBGLP0DKB5 382 aa7.05□□□□□ -1.28
YBX3-209ENST00000540747 EDN3P14138 238 aa7.05□□□□□ -1.28
YBX3-209ENST00000540747 AGXTP21549 392 aa7.05□□□□□ -1.28
YBX3-209ENST00000540747 ITGA3P26006 1051 aa7.05□□□□□ -1.28
YBX3-209ENST00000540747 GRNP28799 593 aaKnown RBP7.05□□□□□ -1.28
YBX3-209ENST00000540747 PDHA2P29803 388 aa7.05□□□□□ -1.28
YBX3-209ENST00000540747 AKT1P31749 480 aa7.05□□□□□ -1.28
YBX3-209ENST00000540747 FOLR3P41439 243 aa7.05□□□□□ -1.28
YBX3-209ENST00000540747 NR2C2P49116 596 aa7.05□□□□□ -1.28
YBX3-209ENST00000540747 ZNF75DP51815 510 aa7.05□□□□□ -1.28
YBX3-209ENST00000540747 ZNF140P52738 457 aaPredicted RBP7.05□□□□□ -1.28
YBX3-209ENST00000540747 PRKAA1Q13131 559 aa7.05□□□□□ -1.28
YBX3-209ENST00000540747 MPP3Q13368 585 aa7.05□□□□□ -1.28
YBX3-209ENST00000540747 TCEAL1Q15170 157 aa7.05□□□□□ -1.28
YBX3-209ENST00000540747 SLC18A3Q16572 532 aa7.05□□□□□ -1.28
YBX3-209ENST00000540747 KYNUQ16719 465 aa7.05□□□□□ -1.28
YBX3-209ENST00000540747 B3GNTL1Q67FW5 361 aaPredicted RBP7.05□□□□□ -1.28
YBX3-209ENST00000540747 ZNF324BQ6AW86 544 aaPredicted RBP7.05□□□□□ -1.28
YBX3-209ENST00000540747 SARM1Q6SZW1 724 aa7.05□□□□□ -1.28
YBX3-209ENST00000540747 RANBP10Q6VN20 620 aa7.05□□□□□ -1.28
YBX3-209ENST00000540747 TRIM73Q86UV7 250 aa7.05□□□□□ -1.28
YBX3-209ENST00000540747 LUZP1Q86V48 1076 aa7.05□□□□□ -1.28
YBX3-209ENST00000540747 KLHDC8BQ8IXV7 354 aa7.05□□□□□ -1.28
YBX3-209ENST00000540747 CFAP206Q8IYR0 622 aa7.05□□□□□ -1.28
YBX3-209ENST00000540747 NXPE1Q8N323 547 aa7.05□□□□□ -1.28
YBX3-209ENST00000540747 ZADH2Q8N4Q0 377 aa7.05□□□□□ -1.28
YBX3-209ENST00000540747 SLC25A41Q8N5S1 370 aa7.05□□□□□ -1.28
YBX3-209ENST00000540747 C19orf47Q8N9M1 422 aaKnown RBP7.05□□□□□ -1.28
YBX3-209ENST00000540747 IPMKQ8NFU5 416 aa7.05□□□□□ -1.28
YBX3-209ENST00000540747 OR4K2Q8NGD2 314 aa7.05□□□□□ -1.28
YBX3-209ENST00000540747 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.05□□□□□ -1.28
YBX3-209ENST00000540747 GRHL3Q8TE85 626 aa7.05□□□□□ -1.28
YBX3-209ENST00000540747 TFB1MQ8WVM0 346 aaKnown RBP7.05□□□□□ -1.28
YBX3-209ENST00000540747 TM9SF4Q92544 642 aa7.05□□□□□ -1.28
YBX3-209ENST00000540747 PTERQ96BW5 349 aa7.05□□□□□ -1.28
YBX3-209ENST00000540747 IQCDQ96DY2 449 aa7.05□□□□□ -1.28
YBX3-209ENST00000540747 QKIQ96PU8 341 aaKnown RBP eCLIP7.05□□□□□ -1.28
YBX3-209ENST00000540747 OR2A14Q96R47 310 aa7.05□□□□□ -1.28
YBX3-209ENST00000540747 SPRTNQ9H040 489 aaPredicted RBP7.05□□□□□ -1.28
YBX3-209ENST00000540747 MVB12BQ9H7P6 319 aa7.05□□□□□ -1.28
YBX3-209ENST00000540747 SLC6A20Q9NP91 592 aa7.05□□□□□ -1.28
YBX3-209ENST00000540747 ACTR10Q9NZ32 417 aa7.05□□□□□ -1.28
YBX3-209ENST00000540747 FKBPLQ9UIM3 349 aa7.05□□□□□ -1.28
YBX3-209ENST00000540747 ICKQ9UPZ9 632 aa7.05□□□□□ -1.28
YBX3-209ENST00000540747 CDYLQ9Y232 598 aa7.05□□□□□ -1.28
YBX3-209ENST00000540747 PTRH2Q9Y3E5 179 aaKnown RBP7.05□□□□□ -1.28
YBX3-209ENST00000540747 PKP3Q9Y446 797 aa7.05□□□□□ -1.28
YBX3-209ENST00000540747 AP1M2Q9Y6Q5 423 aa7.05□□□□□ -1.28
YBX3-209ENST00000540747 CCDC88CQ9P219 2028 aa7.05□□□□□ -1.28
YBX3-209ENST00000540747 SNRNP200O75643 2136 aaKnown RBP7.04□□□□□ -1.28
YBX3-209ENST00000540747 UQCRHLA0A096LP55 91 aa7.04□□□□□ -1.28
YBX3-209ENST00000540747 C2orf74A8MZ97 194 aa7.04□□□□□ -1.28
YBX3-209ENST00000540747 AGPSO00116 658 aa7.04□□□□□ -1.28
YBX3-209ENST00000540747 PEX12O00623 359 aa7.04□□□□□ -1.28
YBX3-209ENST00000540747 SOCS6O14544 535 aa7.04□□□□□ -1.28
YBX3-209ENST00000540747 DYNC1I1O14576 645 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms