RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 MIER2Q8N344 545 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 CCDC185Q8N715 623 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 CCNYL1Q8N7R7 359 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 TXNDC5Q8NBS9 432 aaKnown RBP7.54□□□□□ -1.2
CCDC60-204ENST00000539847 CCNYQ8ND76 341 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 FAM156AQ8NDB6 213 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 ABHD11Q8NFV4 315 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 NETO1Q8TDF5 533 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 THAP3Q8WTV1 239 aaPredicted RBP7.54□□□□□ -1.2
CCDC60-204ENST00000539847 SNX19Q92543 992 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 MUL1Q969V5 352 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 ZNF566Q969W8 418 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 ELSPBP1Q96BH3 223 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 NXNL1Q96CM4 212 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 CPB2Q96IY4 423 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 UROC1Q96N76 676 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 ALPK1Q96QP1 1244 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 FCRL5Q96RD9 977 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 FEM1AQ9BSK4 669 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 RPP25Q9BUL9 199 aaKnown RBP7.54□□□□□ -1.2
CCDC60-204ENST00000539847 MLPHQ9BV36 600 aaPredicted RBP7.54□□□□□ -1.2
CCDC60-204ENST00000539847 CAB39LQ9H9S4 337 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 PARVBQ9HBI1 364 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 AKIP1Q9NQ31 210 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 SLC52A3Q9NQ40 469 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 TRNAU1APQ9NX07 287 aaKnown RBP7.54□□□□□ -1.2
CCDC60-204ENST00000539847 MTRRQ9UBK8 725 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 SUN2Q9UH99 717 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 GPN3Q9UHW5 284 aaPredicted RBP7.54□□□□□ -1.2
CCDC60-204ENST00000539847 MAGED2Q9UNF1 606 aaPredicted RBP7.54□□□□□ -1.2
CCDC60-204ENST00000539847 ERVK-11Q9UQG0 969 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 TMEM98Q9Y2Y6 226 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 HES2Q9Y543 173 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 PCDHB5Q9Y5E4 795 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 A3GALT2U3KPV4 340 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 USP24Q9UPU5 2620 aa7.54□□□□□ -1.2
CCDC60-204ENST00000539847 ARID2Q68CP9 1835 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 C1orf232A0A0U1RR37 186 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 A0A1W2PP18 115 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 SAGE2PA6NJ88 616 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 EEF2KO00418 725 aaKnown RBP7.53□□□□□ -1.2
CCDC60-204ENST00000539847 NME4O00746 187 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 ZNF197O14709 1029 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 SLC30A4O14863 429 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 RGS13O14921 159 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 ANGPT2O15123 496 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 DEAF1O75398 565 aaPredicted RBP7.53□□□□□ -1.2
CCDC60-204ENST00000539847 WISP3O95389 354 aaPredicted RBP7.53□□□□□ -1.2
CCDC60-204ENST00000539847 JUNP05412 331 aaKnown RBP7.53□□□□□ -1.2
CCDC60-204ENST00000539847 RETP07949 1114 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 ADRB1P08588 477 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 GNAO1P09471 354 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 GSTT2P0CG29 244 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 GSTT2BP0CG30 244 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 CDH1P12830 882 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 TDGF1P13385 188 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 ZNF182P17025 639 aaPredicted RBP7.53□□□□□ -1.2
CCDC60-204ENST00000539847 LBPP18428 481 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 IL1RNP18510 177 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 RPL17P18621 184 aaKnown RBP7.53□□□□□ -1.2
CCDC60-204ENST00000539847 MATN1P21941 496 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 CRHBPP24387 322 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 AKAP5P24588 427 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 CCNCP24863 283 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 ACVR2AP27037 513 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 NMBRP28336 390 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 CD40LGP29965 261 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 HOXA6P31267 233 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 CD68P34810 354 aaPredicted RBP7.53□□□□□ -1.2
CCDC60-204ENST00000539847 RYKP34925 604 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 CNR2P34972 360 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 GSSP48637 474 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 GEMP55040 296 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 CXCR4P61073 352 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 FZD5Q13467 585 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 DAG1Q14118 895 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 SPCS2Q15005 226 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 DGUOKQ16854 277 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 SOWAHAQ2M3V2 549 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 RFX4Q33E94 735 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 DCAF4L1Q3SXM0 396 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 CERCAMQ5T4B2 595 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 XAF1Q6GPH4 301 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 SLC8B1Q6J4K2 584 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 GALNT18Q6P9A2 607 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 PRSS55Q6UWB4 352 aaPredicted RBP7.53□□□□□ -1.2
CCDC60-204ENST00000539847 CYP2R1Q6VVX0 501 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 TPRG1Q6ZUI0 275 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 REC114Q7Z4M0 266 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 LSRQ86X29 649 aaPredicted RBP7.53□□□□□ -1.2
CCDC60-204ENST00000539847 ZC3H7AQ8IWR0 971 aaKnown RBP7.53□□□□□ -1.2
CCDC60-204ENST00000539847 SPARTQ8N0X7 666 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 SVOPLQ8N434 492 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 DPP10Q8N608 796 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 ATP6V0D2Q8N8Y2 350 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 PHF10Q8WUB8 498 aaKnown RBP7.53□□□□□ -1.2
CCDC60-204ENST00000539847 HEXDCQ8WVB3 486 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 CYGBQ8WWM9 190 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 FATE1Q969F0 183 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 TMEM125Q96AQ2 219 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms