RNA–Protein interactions for RNA: ENST00000539409.5

FAM60A-206, Transcript of Protein FAM60A, humanhuman

TSL 1 (best) BASIC

Gene FAM60A, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM60A-206ENST00000539409 TFGQ92734 400 aaPredicted RBP11.14□□□□□ -0.63
FAM60A-206ENST00000539409 FOPNLQ96NB1 174 aa11.14□□□□□ -0.63
FAM60A-206ENST00000539409 ADAM21Q9UKJ8 722 aa11.14□□□□□ -0.63
FAM60A-206ENST00000539409 PCOLCE2Q9UKZ9 415 aa11.14□□□□□ -0.63
FAM60A-206ENST00000539409 CFAP20Q9Y6A4 193 aaKnown RBP11.14□□□□□ -0.63
FAM60A-206ENST00000539409 IFRD1O00458 451 aaPredicted RBP11.14□□□□□ -0.63
FAM60A-206ENST00000539409 SNX2O60749 519 aa11.14□□□□□ -0.63
FAM60A-206ENST00000539409 SMIM24O75264 130 aa11.14□□□□□ -0.63
FAM60A-206ENST00000539409 IPO13O94829 963 aaKnown RBP11.14□□□□□ -0.63
FAM60A-206ENST00000539409 C1orf105O95561 183 aa11.14□□□□□ -0.63
FAM60A-206ENST00000539409 CATP04040 527 aaKnown RBP11.14□□□□□ -0.63
FAM60A-206ENST00000539409 GFAPP14136 432 aa11.14□□□□□ -0.63
FAM60A-206ENST00000539409 CYP2A7P20853 494 aa11.14□□□□□ -0.63
FAM60A-206ENST00000539409 BGNP21810 368 aa11.14□□□□□ -0.63
FAM60A-206ENST00000539409 HOXD12P35452 270 aa11.14□□□□□ -0.63
FAM60A-206ENST00000539409 CTSKP43235 329 aa11.14□□□□□ -0.63
FAM60A-206ENST00000539409 RPIAP49247 311 aa11.14□□□□□ -0.63
FAM60A-206ENST00000539409 PRKAA2P54646 552 aa11.14□□□□□ -0.63
FAM60A-206ENST00000539409 CLCA4Q14CN2 919 aa11.14□□□□□ -0.63
FAM60A-206ENST00000539409 PFKFB4Q16877 469 aa11.14□□□□□ -0.63
FAM60A-206ENST00000539409 KIF19Q2TAC6 998 aa11.14□□□□□ -0.63
FAM60A-206ENST00000539409 CCSMST1Q4G0I0 132 aa11.14□□□□□ -0.63
FAM60A-206ENST00000539409 LIPMQ5VYY2 423 aa11.14□□□□□ -0.63
FAM60A-206ENST00000539409 WASH2PQ6VEQ5 465 aa11.14□□□□□ -0.63
FAM60A-206ENST00000539409 ZCCHC23Q6ZST2 131 aa11.14□□□□□ -0.63
FAM60A-206ENST00000539409 PTGR2Q8N8N7 351 aaPredicted RBP11.14□□□□□ -0.63
FAM60A-206ENST00000539409 PHF21BQ96EK2 531 aa11.14□□□□□ -0.63
FAM60A-206ENST00000539409 MAGEB18Q96M61 343 aa11.14□□□□□ -0.63
FAM60A-206ENST00000539409 TMEM237Q96Q45 408 aa11.14□□□□□ -0.63
FAM60A-206ENST00000539409 GSDMCQ9BYG8 508 aa11.14□□□□□ -0.63
FAM60A-206ENST00000539409 CCDC134Q9H6E4 229 aa11.14□□□□□ -0.63
FAM60A-206ENST00000539409 WASH6PQ9NQA3 447 aa11.14□□□□□ -0.63
FAM60A-206ENST00000539409 CD274Q9NZQ7 290 aa11.14□□□□□ -0.63
FAM60A-206ENST00000539409 SCHIP1Q9P0W5 487 aaPredicted RBP11.14□□□□□ -0.63
FAM60A-206ENST00000539409 ASF1AQ9Y294 204 aa11.14□□□□□ -0.63
FAM60A-206ENST00000539409 TMEM131Q92545 1883 aa11.14□□□□□ -0.63
FAM60A-206ENST00000539409 OR52A4PA6NMU1 304 aa11.13□□□□□ -0.63
FAM60A-206ENST00000539409 GUCA1CO95843 209 aa11.13□□□□□ -0.63
FAM60A-206ENST00000539409 CTSEP14091 401 aa11.13□□□□□ -0.63
FAM60A-206ENST00000539409 CHI3L2Q15782 390 aa11.13□□□□□ -0.63
FAM60A-206ENST00000539409 LPAL2Q16609 132 aa11.13□□□□□ -0.63
FAM60A-206ENST00000539409 PRAMEF14Q5SWL7 426 aa11.13□□□□□ -0.63
FAM60A-206ENST00000539409 DUS1LQ6P1R4 473 aaKnown RBP11.13□□□□□ -0.63
FAM60A-206ENST00000539409 ABRAXAS1Q6UWZ7 409 aa11.13□□□□□ -0.63
FAM60A-206ENST00000539409 SLC22A9Q8IVM8 553 aa11.13□□□□□ -0.63
FAM60A-206ENST00000539409 FBXO39Q8N4B4 442 aa11.13□□□□□ -0.63
FAM60A-206ENST00000539409 FBXO15Q8NCQ5 510 aaPredicted RBP11.13□□□□□ -0.63
FAM60A-206ENST00000539409 OR5AR1Q8NGP9 310 aa11.13□□□□□ -0.63
FAM60A-206ENST00000539409 OR6Y1Q8NGX8 325 aa11.13□□□□□ -0.63
FAM60A-206ENST00000539409 CCDC126Q96EE4 140 aa11.13□□□□□ -0.63
FAM60A-206ENST00000539409 C12orf66Q96MD2 445 aa11.13□□□□□ -0.63
FAM60A-206ENST00000539409 INSM2Q96T92 566 aaPredicted RBP11.13□□□□□ -0.63
FAM60A-206ENST00000539409 CAPS2Q9BXY5 557 aa11.13□□□□□ -0.63
FAM60A-206ENST00000539409 ERVMER34-1Q9H9K5 563 aa11.13□□□□□ -0.63
FAM60A-206ENST00000539409 ARL15Q9NXU5 204 aa11.13□□□□□ -0.63
FAM60A-206ENST00000539409 NCKIPSDQ9NZQ3 722 aa11.13□□□□□ -0.63
FAM60A-206ENST00000539409 TAAR2Q9P1P5 351 aa11.13□□□□□ -0.63
FAM60A-206ENST00000539409 SNX11Q9Y5W9 270 aa11.13□□□□□ -0.63
FAM60A-206ENST00000539409 R4GN57 208 aa11.13□□□□□ -0.63
FAM60A-206ENST00000539409 CUL9Q8IWT3 2517 aa11.13□□□□□ -0.63
FAM60A-206ENST00000539409 TDRD6O60522 2096 aaKnown RBP11.13□□□□□ -0.63
FAM60A-206ENST00000539409 TRIM13O60858 407 aa11.13□□□□□ -0.63
FAM60A-206ENST00000539409 MAP4P27816 1152 aaKnown RBP11.13□□□□□ -0.63
FAM60A-206ENST00000539409 ALDH18A1P54886 795 aaKnown RBP11.13□□□□□ -0.63
FAM60A-206ENST00000539409 AP1S2P56377 157 aa11.13□□□□□ -0.63
FAM60A-206ENST00000539409 DNAJB13P59910 316 aa11.13□□□□□ -0.63
FAM60A-206ENST00000539409 CDKL1Q00532 357 aa11.13□□□□□ -0.63
FAM60A-206ENST00000539409 C1orf61Q13536 156 aa11.13□□□□□ -0.63
FAM60A-206ENST00000539409 OR5K2Q8NHB8 316 aa11.13□□□□□ -0.63
FAM60A-206ENST00000539409 MCOLN3Q8TDD5 553 aa11.13□□□□□ -0.63
FAM60A-206ENST00000539409 ZNF75CPQ92670 426 aaPredicted RBP11.13□□□□□ -0.63
FAM60A-206ENST00000539409 TRIM54Q9BYV2 358 aa11.13□□□□□ -0.63
FAM60A-206ENST00000539409 ACSS2Q9NR19 701 aa11.13□□□□□ -0.63
FAM60A-206ENST00000539409 IMP3Q9NV31 184 aaKnown RBP11.13□□□□□ -0.63
FAM60A-206ENST00000539409 TMCO1Q9UM00 188 aa11.13□□□□□ -0.63
FAM60A-206ENST00000539409 MYO1CO00159 1063 aa11.12□□□□□ -0.63
FAM60A-206ENST00000539409 SIX3O95343 332 aaPredicted RBP11.12□□□□□ -0.63
FAM60A-206ENST00000539409 HIST1H2AGP0C0S8 130 aaPredicted RBP11.12□□□□□ -0.63
FAM60A-206ENST00000539409 F3P13726 295 aa11.12□□□□□ -0.63
FAM60A-206ENST00000539409 HIST1H2ADP20671 130 aa11.12□□□□□ -0.63
FAM60A-206ENST00000539409 AGTR2P50052 363 aa11.12□□□□□ -0.63
FAM60A-206ENST00000539409 HNRNPKP61978 463 aaKnown RBP eCLIP11.12□□□□□ -0.63
FAM60A-206ENST00000539409 HERVK_113P63132 956 aa11.12□□□□□ -0.63
FAM60A-206ENST00000539409 SETDB1Q15047 1291 aa11.12□□□□□ -0.63
FAM60A-206ENST00000539409 ELOCQ15369 112 aa11.12□□□□□ -0.63
FAM60A-206ENST00000539409 RPE65Q16518 533 aa11.12□□□□□ -0.63
FAM60A-206ENST00000539409 FBXO48Q5FWF7 155 aa11.12□□□□□ -0.63
FAM60A-206ENST00000539409 CDKL4Q5MAI5 379 aa11.12□□□□□ -0.63
FAM60A-206ENST00000539409 RGS9BPQ6ZS82 235 aa11.12□□□□□ -0.63
FAM60A-206ENST00000539409 TAF8Q7Z7C8 310 aa11.12□□□□□ -0.63
FAM60A-206ENST00000539409 DCUN1D3Q8IWE4 304 aa11.12□□□□□ -0.63
FAM60A-206ENST00000539409 PHC3Q8NDX5 983 aa11.12□□□□□ -0.63
FAM60A-206ENST00000539409 ZNF548Q8NEK5 533 aaPredicted RBP11.12□□□□□ -0.63
FAM60A-206ENST00000539409 RAB3IL1Q8TBN0 382 aa11.12□□□□□ -0.63
FAM60A-206ENST00000539409 RHBDF1Q96CC6 855 aa11.12□□□□□ -0.63
FAM60A-206ENST00000539409 L3HYPDHQ96EM0 354 aa11.12□□□□□ -0.63
FAM60A-206ENST00000539409 MOCOSQ96EN8 888 aa11.12□□□□□ -0.63
FAM60A-206ENST00000539409 HIST1H2AHQ96KK5 128 aa11.12□□□□□ -0.63
FAM60A-206ENST00000539409 HIST1H2AJQ99878 128 aa11.12□□□□□ -0.63
FAM60A-206ENST00000539409 EGFL8Q99944 293 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms