RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 SAP25Q8TEE9 199 aa16.85■□□□□ 0.29
CLN6-202ENST00000538696 MRPL57Q9BQC6 102 aaKnown RBP16.85■□□□□ 0.29
CLN6-202ENST00000538696 EDEM2Q9BV94 578 aa16.85■□□□□ 0.29
CLN6-202ENST00000538696 MRPL46Q9H2W6 279 aaKnown RBP16.85■□□□□ 0.29
CLN6-202ENST00000538696 OSGEPL1Q9H4B0 414 aa16.85■□□□□ 0.29
CLN6-202ENST00000538696 SARS2Q9NP81 518 aaKnown RBP16.85■□□□□ 0.29
CLN6-202ENST00000538696 SPATS2LQ9NUQ6 558 aaKnown RBP16.85■□□□□ 0.29
CLN6-202ENST00000538696 SLC5A10A0PJK1 596 aa16.84■□□□□ 0.29
CLN6-202ENST00000538696 KLF11O14901 512 aa16.84■□□□□ 0.29
CLN6-202ENST00000538696 ZBTB14O43829 449 aa16.84■□□□□ 0.29
CLN6-202ENST00000538696 EDF1O60869 148 aaKnown RBP16.84■□□□□ 0.29
CLN6-202ENST00000538696 GIMD1P0DJR0 217 aa16.84■□□□□ 0.29
CLN6-202ENST00000538696 MYL2P10916 166 aa16.84■□□□□ 0.29
CLN6-202ENST00000538696 TFEBP19484 476 aa16.84■□□□□ 0.29
CLN6-202ENST00000538696 BST1Q10588 318 aa16.84■□□□□ 0.29
CLN6-202ENST00000538696 SF3A3Q12874 501 aaKnown RBP eCLIP16.84■□□□□ 0.29
CLN6-202ENST00000538696 SYTL3Q4VX76 610 aa16.84■□□□□ 0.29
CLN6-202ENST00000538696 KLC3Q6P597 504 aa16.84■□□□□ 0.29
CLN6-202ENST00000538696 TAF8Q7Z7C8 310 aa16.84■□□□□ 0.29
CLN6-202ENST00000538696 GKN2Q86XP6 184 aa16.84■□□□□ 0.29
CLN6-202ENST00000538696 GATAD2AQ86YP4 633 aa16.84■□□□□ 0.29
CLN6-202ENST00000538696 CPNE9Q8IYJ1 553 aa16.84■□□□□ 0.29
CLN6-202ENST00000538696 CFAP206Q8IYR0 622 aa16.84■□□□□ 0.29
CLN6-202ENST00000538696 SLC25A45Q8N413 288 aa16.84■□□□□ 0.29
CLN6-202ENST00000538696 ZBTB2Q8N680 514 aa16.84■□□□□ 0.29
CLN6-202ENST00000538696 PTERQ96BW5 349 aa16.84■□□□□ 0.29
CLN6-202ENST00000538696 SYTL2Q9HCH5 934 aa16.84■□□□□ 0.29
CLN6-202ENST00000538696 LATS2Q9NRM7 1088 aa16.84■□□□□ 0.29
CLN6-202ENST00000538696 DNAAF2Q9NVR5 837 aaKnown RBP16.84■□□□□ 0.29
CLN6-202ENST00000538696 TAAR2Q9P1P5 351 aa16.84■□□□□ 0.29
CLN6-202ENST00000538696 IKZF3Q9UKT9 509 aa16.84■□□□□ 0.29
CLN6-202ENST00000538696 CDYLQ9Y232 598 aa16.84■□□□□ 0.29
CLN6-202ENST00000538696 A6NCN8 305 aa16.83■□□□□ 0.28
CLN6-202ENST00000538696 CDX4O14627 284 aaPredicted RBP16.83■□□□□ 0.28
CLN6-202ENST00000538696 LIN7AO14910 233 aaPredicted RBP16.83■□□□□ 0.28
CLN6-202ENST00000538696 DLX3O60479 287 aa16.83■□□□□ 0.28
CLN6-202ENST00000538696 GPC4O75487 556 aa16.83■□□□□ 0.28
CLN6-202ENST00000538696 EML2O95834 649 aa16.83■□□□□ 0.28
CLN6-202ENST00000538696 TSPAN12O95859 305 aa16.83■□□□□ 0.28
CLN6-202ENST00000538696 ZNF883P0CG24 379 aa16.83■□□□□ 0.28
CLN6-202ENST00000538696 GBX1Q14549 363 aa16.83■□□□□ 0.28
CLN6-202ENST00000538696 ACAP2Q15057 778 aa16.83■□□□□ 0.28
CLN6-202ENST00000538696 DEFB133Q30KQ1 61 aa16.83■□□□□ 0.28
CLN6-202ENST00000538696 METRNLQ641Q3 311 aa16.83■□□□□ 0.28
CLN6-202ENST00000538696 OTOAQ7RTW8 1153 aa16.83■□□□□ 0.28
CLN6-202ENST00000538696 VRK3Q8IV63 474 aa16.83■□□□□ 0.28
CLN6-202ENST00000538696 NKAPQ8N5F7 415 aaKnown RBP16.83■□□□□ 0.28
CLN6-202ENST00000538696 PPP1R14CQ8TAE6 165 aa16.83■□□□□ 0.28
CLN6-202ENST00000538696 RAB3IL1Q8TBN0 382 aa16.83■□□□□ 0.28
CLN6-202ENST00000538696 GLMNQ92990 594 aa16.83■□□□□ 0.28
CLN6-202ENST00000538696 LINGO1Q96FE5 620 aa16.83■□□□□ 0.28
CLN6-202ENST00000538696 ELAC2Q9BQ52 826 aaKnown RBP16.83■□□□□ 0.28
CLN6-202ENST00000538696 DERL2Q9GZP9 239 aa16.83■□□□□ 0.28
CLN6-202ENST00000538696 ALG9Q9H6U8 611 aa16.83■□□□□ 0.28
CLN6-202ENST00000538696 ZNF395Q9H8N7 513 aaPredicted RBP16.83■□□□□ 0.28
CLN6-202ENST00000538696 PRDM8Q9NQV8 689 aa16.83■□□□□ 0.28
CLN6-202ENST00000538696 TBC1D29Q9UFV1 150 aa16.83■□□□□ 0.28
CLN6-202ENST00000538696 DHRS7Q9Y394 339 aa16.83■□□□□ 0.28
CLN6-202ENST00000538696 CSNK1G3Q9Y6M4 447 aa16.83■□□□□ 0.28
CLN6-202ENST00000538696 ASCC3Q8N3C0 2202 aaKnown RBP16.82■□□□□ 0.28
CLN6-202ENST00000538696 LMO7DNF2Z398 122 aa16.82■□□□□ 0.28
CLN6-202ENST00000538696 KPNA5O15131 536 aa16.82■□□□□ 0.28
CLN6-202ENST00000538696 YY2O15391 372 aa16.82■□□□□ 0.28
CLN6-202ENST00000538696 FFAR2O15552 330 aa16.82■□□□□ 0.28
CLN6-202ENST00000538696 PCDHGA12O60330 932 aa16.82■□□□□ 0.28
CLN6-202ENST00000538696 SNX2O60749 519 aa16.82■□□□□ 0.28
CLN6-202ENST00000538696 SERPINE1P05121 402 aa16.82■□□□□ 0.28
CLN6-202ENST00000538696 ANXA6P08133 673 aa16.82■□□□□ 0.28
CLN6-202ENST00000538696 RBP1P09455 135 aa16.82■□□□□ 0.28
CLN6-202ENST00000538696 IDSP22304 550 aa16.82■□□□□ 0.28
CLN6-202ENST00000538696 PDHA2P29803 388 aa16.82■□□□□ 0.28
CLN6-202ENST00000538696 HSPA14Q0VDF9 509 aa16.82■□□□□ 0.28
CLN6-202ENST00000538696 STX3Q13277 289 aa16.82■□□□□ 0.28
CLN6-202ENST00000538696 OR4D1Q15615 310 aa16.82■□□□□ 0.28
CLN6-202ENST00000538696 AASDHQ4L235 1098 aaPredicted RBP16.82■□□□□ 0.28
CLN6-202ENST00000538696 ACSBG2Q5FVE4 666 aa16.82■□□□□ 0.28
CLN6-202ENST00000538696 PLEKHS1Q5SXH7 462 aa16.82■□□□□ 0.28
CLN6-202ENST00000538696 ATG16L1Q676U5 607 aa16.82■□□□□ 0.28
CLN6-202ENST00000538696 UGT3A1Q6NUS8 523 aa16.82■□□□□ 0.28
CLN6-202ENST00000538696 ISCA2Q86U28 154 aa16.82■□□□□ 0.28
CLN6-202ENST00000538696 SFTPA2Q8IWL1 248 aa16.82■□□□□ 0.28
CLN6-202ENST00000538696 SDR16C5Q8N3Y7 309 aa16.82■□□□□ 0.28
CLN6-202ENST00000538696 INPP5DQ92835 1189 aa16.82■□□□□ 0.28
CLN6-202ENST00000538696 RMDN2Q96LZ7 410 aa16.82■□□□□ 0.28
CLN6-202ENST00000538696 PITPNM3Q9BZ71 974 aa16.82■□□□□ 0.28
CLN6-202ENST00000538696 WWP1Q9H0M0 922 aa16.82■□□□□ 0.28
CLN6-202ENST00000538696 OR52A5Q9H2C5 316 aa16.82■□□□□ 0.28
CLN6-202ENST00000538696 OXSMQ9NWU1 459 aa16.82■□□□□ 0.28
CLN6-202ENST00000538696 KLHL42Q9P2K6 505 aa16.82■□□□□ 0.28
CLN6-202ENST00000538696 DOLKQ9UPQ8 538 aa16.82■□□□□ 0.28
CLN6-202ENST00000538696 WDR37Q9Y2I8 494 aa16.82■□□□□ 0.28
CLN6-202ENST00000538696 NPEPPSL1A6NEC2 478 aa16.81■□□□□ 0.28
CLN6-202ENST00000538696 NEMP2A6NFY4 417 aa16.81■□□□□ 0.28
CLN6-202ENST00000538696 PDZK1P1A8MUH7 402 aa16.81■□□□□ 0.28
CLN6-202ENST00000538696 SNNO75324 88 aaPredicted RBP16.81■□□□□ 0.28
CLN6-202ENST00000538696 RPL10P27635 214 aaKnown RBP16.81■□□□□ 0.28
CLN6-202ENST00000538696 SKIV2L2P42285 1042 aaKnown RBP16.81■□□□□ 0.28
CLN6-202ENST00000538696 KCNC1P48547 511 aa16.81■□□□□ 0.28
CLN6-202ENST00000538696 RPA4Q13156 261 aa16.81■□□□□ 0.28
CLN6-202ENST00000538696 TTLL9Q3SXZ7 439 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms