RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 AGXTP21549 392 aa11.02□□□□□ -0.65
LINC00346-201ENST00000538077 DRD4P21917 467 aa11.02□□□□□ -0.65
LINC00346-201ENST00000538077 PPIBP23284 216 aaKnown RBP11.02□□□□□ -0.65
LINC00346-201ENST00000538077 BLKP51451 505 aa11.02□□□□□ -0.65
LINC00346-201ENST00000538077 ADARP55265 1226 aaKnown RBP11.02□□□□□ -0.65
LINC00346-201ENST00000538077 VLDLRP98155 873 aa11.02□□□□□ -0.65
LINC00346-201ENST00000538077 C2orf15Q8WU43 125 aaKnown RBP11.02□□□□□ -0.65
LINC00346-201ENST00000538077 CIB1Q99828 191 aa11.02□□□□□ -0.65
LINC00346-201ENST00000538077 IFT27Q9BW83 186 aa11.02□□□□□ -0.65
LINC00346-201ENST00000538077 C1QTNF1Q9BXJ1 281 aa11.02□□□□□ -0.65
LINC00346-201ENST00000538077 ELAC1Q9H777 363 aaKnown RBP11.02□□□□□ -0.65
LINC00346-201ENST00000538077 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.02□□□□□ -0.65
LINC00346-201ENST00000538077 REXO2Q9Y3B8 237 aaKnown RBP11.02□□□□□ -0.65
LINC00346-201ENST00000538077 ZNF142P52746 1687 aaPredicted RBP11.02□□□□□ -0.65
LINC00346-201ENST00000538077 ADAMTS3O15072 1205 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 PGRMC2O15173 223 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 LDB2O43679 373 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 UGT2B11O75310 529 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 SNHG28P0DPA3 235 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 PAX7P23759 505 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 VARSP26640 1264 aaKnown RBP11.01□□□□□ -0.65
LINC00346-201ENST00000538077 ASMTP46597 345 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 AP1S1P61966 158 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 NFKB2Q00653 900 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 ARHGAP1Q07960 439 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 CCINQ13939 588 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 PIGXQ8TBF5 258 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 ANKHQ9HCJ1 492 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 ZDHHC4Q9NPG8 344 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 DNAAF2Q9NVR5 837 aaKnown RBP11.01□□□□□ -0.65
LINC00346-201ENST00000538077 TMA7Q9Y2S6 64 aaKnown RBP11.01□□□□□ -0.65
LINC00346-201ENST00000538077 MRC1P22897 1456 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 ELOVL7A1L3X0 281 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 IFNA6P05013 189 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 JAM2P57087 298 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 MTPNP58546 118 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 PRR5P85299 388 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 LIPEQ05469 1076 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 OLIG2Q13516 323 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 PDGFRLQ15198 375 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 RAB30Q15771 203 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 ARSJQ5FYB0 599 aaPredicted RBP11.01□□□□□ -0.65
LINC00346-201ENST00000538077 TMPRSS11AQ6ZMR5 421 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 CLNKQ7Z7G1 428 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 TRABD2AQ86V40 505 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 OR10H4Q8NGA5 316 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 GORASP1Q9BQQ3 440 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 KCNK6Q9Y257 313 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 MAGEB17A8MXT2 336 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 C8GP07360 202 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 CFHP08603 1231 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 MNDAP41218 407 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 TAS2R50P59544 299 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 CCSAPQ6IQ19 270 aaPredicted RBP11.01□□□□□ -0.65
LINC00346-201ENST00000538077 B3GNT6Q6ZMB0 384 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 AMIGO1Q86WK6 493 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 CPNE8Q86YQ8 564 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 CELF5Q8N6W0 485 aaKnown RBP11.01□□□□□ -0.65
LINC00346-201ENST00000538077 FAM156AQ8NDB6 213 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 FAM13CQ8NE31 585 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 NAT14Q8WUY8 206 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 COQ8BQ96D53 544 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 RBCK1Q9BYM8 510 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 BCO2Q9BYV7 579 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 INTS10Q9NVR2 710 aaKnown RBP11.01□□□□□ -0.65
LINC00346-201ENST00000538077 TRPS1Q9UHF7 1281 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 AP4B1Q9Y6B7 739 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 XRN1Q8IZH2 1706 aaKnown RBP11.01□□□□□ -0.65
LINC00346-201ENST00000538077 C2CD4BA6NLJ0 364 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 GRXCR1A8MXD5 290 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 EIF1AYO14602 144 aaKnown RBP11.01□□□□□ -0.65
LINC00346-201ENST00000538077 TFECO14948 347 aaPredicted RBP11.01□□□□□ -0.65
LINC00346-201ENST00000538077 HOXB2P14652 356 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 CBLP22681 906 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 L1CAMP32004 1257 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 KHKP50053 298 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 GDI2P50395 445 aaKnown RBP11.01□□□□□ -0.65
LINC00346-201ENST00000538077 CLCNKAP51800 687 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 SMCO1Q147U7 214 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 SIRPB2Q5JXA9 342 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 TMCO2Q7Z6W1 182 aaPredicted RBP11.01□□□□□ -0.65
LINC00346-201ENST00000538077 C7orf57Q8NEG2 295 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 PIGUQ9H490 435 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 SUV39H2Q9H5I1 410 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 ADAP2Q9NPF8 381 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 TAC3Q9UHF0 121 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 CLDN7O95471 211 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 ALPPP05187 535 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 ENPEPQ07075 957 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 PTGES3Q15185 160 aaKnown RBP11.01□□□□□ -0.65
LINC00346-201ENST00000538077 LYSMD3Q7Z3D4 306 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 UBE2J2Q8N2K1 259 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 COX4I2Q96KJ9 171 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 TBC1D17Q9HA65 648 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 KLRF1Q9NZS2 232 aa11.01□□□□□ -0.65
LINC00346-201ENST00000538077 CDC7O00311 574 aa11□□□□□ -0.65
LINC00346-201ENST00000538077 B4GALT2O60909 372 aa11□□□□□ -0.65
LINC00346-201ENST00000538077 NIPSNAP2O75323 286 aa11□□□□□ -0.65
LINC00346-201ENST00000538077 ZNF823P16415 610 aa11□□□□□ -0.65
LINC00346-201ENST00000538077 CCNOP22674 350 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms