RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 ZBTB2Q8N680 514 aa14.03□□□□□ -0.16
USP44-203ENST00000537435 PAF1Q8N7H5 531 aa14.03□□□□□ -0.16
USP44-203ENST00000537435 GLB1L3Q8NCI6 653 aaPredicted RBP14.03□□□□□ -0.16
USP44-203ENST00000537435 FAM162AQ96A26 154 aa14.03□□□□□ -0.16
USP44-203ENST00000537435 AURKBQ96GD4 344 aaPredicted RBP14.03□□□□□ -0.16
USP44-203ENST00000537435 CNDP2Q96KP4 475 aaKnown RBP14.03□□□□□ -0.16
USP44-203ENST00000537435 CLMPQ9H6B4 373 aa14.03□□□□□ -0.16
USP44-203ENST00000537435 ACTR8Q9H981 624 aa14.03□□□□□ -0.16
USP44-203ENST00000537435 LRTM1Q9HBL6 345 aa14.03□□□□□ -0.16
USP44-203ENST00000537435 LTB4R2Q9NPC1 389 aa14.03□□□□□ -0.16
USP44-203ENST00000537435 IL26Q9NPH9 171 aa14.03□□□□□ -0.16
USP44-203ENST00000537435 SH3PXD2BA1X283 911 aa14.03□□□□□ -0.16
USP44-203ENST00000537435 TRIM64BA6NI03 449 aa14.03□□□□□ -0.16
USP44-203ENST00000537435 CXCR6O00574 342 aa14.03□□□□□ -0.16
USP44-203ENST00000537435 GNGT2O14610 69 aa14.03□□□□□ -0.16
USP44-203ENST00000537435 NOBOXO60393 691 aa14.03□□□□□ -0.16
USP44-203ENST00000537435 CLDN7O95471 211 aa14.03□□□□□ -0.16
USP44-203ENST00000537435 ACRV1P26436 265 aa14.03□□□□□ -0.16
USP44-203ENST00000537435 GKP32189 559 aa14.03□□□□□ -0.16
USP44-203ENST00000537435 AP1S1P61966 158 aa14.03□□□□□ -0.16
USP44-203ENST00000537435 CBX2Q14781 532 aaPredicted RBP14.03□□□□□ -0.16
USP44-203ENST00000537435 SMU1Q2TAY7 513 aa14.03□□□□□ -0.16
USP44-203ENST00000537435 RUNDC3AQ59EK9 446 aa14.03□□□□□ -0.16
USP44-203ENST00000537435 MBOAT1Q6ZNC8 495 aa14.03□□□□□ -0.16
USP44-203ENST00000537435 TRIM46Q7Z4K8 759 aa14.03□□□□□ -0.16
USP44-203ENST00000537435 PHACTR4Q8IZ21 702 aa14.03□□□□□ -0.16
USP44-203ENST00000537435 SLC43A3Q8NBI5 491 aa14.03□□□□□ -0.16
USP44-203ENST00000537435 CLHC1Q8NHS4 586 aa14.03□□□□□ -0.16
USP44-203ENST00000537435 TBC1D15Q8TC07 691 aa14.03□□□□□ -0.16
USP44-203ENST00000537435 MIPOL1Q8TD10 442 aa14.03□□□□□ -0.16
USP44-203ENST00000537435 ULK4Q96C45 1275 aa14.03□□□□□ -0.16
USP44-203ENST00000537435 OSBPL10Q9BXB5 764 aa14.03□□□□□ -0.16
USP44-203ENST00000537435 MRPL9Q9BYD2 267 aaKnown RBP14.03□□□□□ -0.16
USP44-203ENST00000537435 HPS4Q9NQG7 708 aa14.03□□□□□ -0.16
USP44-203ENST00000537435 FAM118AQ9NWS6 357 aa14.03□□□□□ -0.16
USP44-203ENST00000537435 TMEM9Q9P0T7 183 aa14.03□□□□□ -0.16
USP44-203ENST00000537435 CRLS1Q9UJA2 301 aa14.03□□□□□ -0.16
USP44-203ENST00000537435 INVSQ9Y283 1065 aa14.03□□□□□ -0.16
USP44-203ENST00000537435 PRKD3O94806 890 aa14.02□□□□□ -0.16
USP44-203ENST00000537435 WDR47O94967 919 aa14.02□□□□□ -0.16
USP44-203ENST00000537435 EBLN1P0CF75 366 aa14.02□□□□□ -0.16
USP44-203ENST00000537435 JUNBP17275 347 aaPredicted RBP14.02□□□□□ -0.16
USP44-203ENST00000537435 CRHBPP24387 322 aa14.02□□□□□ -0.16
USP44-203ENST00000537435 TPD52P55327 224 aaPredicted RBP14.02□□□□□ -0.16
USP44-203ENST00000537435 SMAD3P84022 425 aaKnown RBP14.02□□□□□ -0.16
USP44-203ENST00000537435 CDH18Q13634 790 aa14.02□□□□□ -0.16
USP44-203ENST00000537435 ANKDD1AQ495B1 522 aa14.02□□□□□ -0.16
USP44-203ENST00000537435 GPRC6AQ5T6X5 926 aa14.02□□□□□ -0.16
USP44-203ENST00000537435 TTC23Q5W5X9 447 aa14.02□□□□□ -0.16
USP44-203ENST00000537435 ANKRD34AQ69YU3 496 aa14.02□□□□□ -0.16
USP44-203ENST00000537435 R3HCC1LQ7Z5L2 792 aaKnown RBP14.02□□□□□ -0.16
USP44-203ENST00000537435 GALNT13Q8IUC8 556 aa14.02□□□□□ -0.16
USP44-203ENST00000537435 SGCDQ92629 289 aa14.02□□□□□ -0.16
USP44-203ENST00000537435 MTFMTQ96DP5 389 aaKnown RBP14.02□□□□□ -0.16
USP44-203ENST00000537435 ALG14Q96F25 216 aa14.02□□□□□ -0.16
USP44-203ENST00000537435 RDH12Q96NR8 316 aa14.02□□□□□ -0.16
USP44-203ENST00000537435 OR52E6Q96RD3 313 aa14.02□□□□□ -0.16
USP44-203ENST00000537435 SH3GL1Q99961 368 aa14.02□□□□□ -0.16
USP44-203ENST00000537435 NTMT1Q9BV86 223 aa14.02□□□□□ -0.16
USP44-203ENST00000537435 LATS2Q9NRM7 1088 aa14.02□□□□□ -0.16
USP44-203ENST00000537435 AFF4Q9UHB7 1163 aaKnown RBP14.02□□□□□ -0.16
USP44-203ENST00000537435 TRPS1Q9UHF7 1281 aa14.02□□□□□ -0.16
USP44-203ENST00000537435 PCDHGA8Q9Y5G5 932 aa14.02□□□□□ -0.16
USP44-203ENST00000537435 A8MX80 341 aa14.02□□□□□ -0.17
USP44-203ENST00000537435 MANBAO00462 879 aa14.02□□□□□ -0.17
USP44-203ENST00000537435 SMAD6O43541 496 aaKnown RBP14.02□□□□□ -0.17
USP44-203ENST00000537435 ABCB7O75027 752 aa14.02□□□□□ -0.17
USP44-203ENST00000537435 TRBC1P01850 177 aa14.02□□□□□ -0.17
USP44-203ENST00000537435 EPB42P16452 691 aa14.02□□□□□ -0.17
USP44-203ENST00000537435 BPIP17213 487 aa14.02□□□□□ -0.17
USP44-203ENST00000537435 PIGAP37287 484 aa14.02□□□□□ -0.17
USP44-203ENST00000537435 PPP2R2BQ00005 443 aa14.02□□□□□ -0.17
USP44-203ENST00000537435 BCL2L1Q07817 233 aa14.02□□□□□ -0.17
USP44-203ENST00000537435 PPP1R8Q12972 351 aaKnown RBP14.02□□□□□ -0.17
USP44-203ENST00000537435 BNIP3Q12983 259 aa14.02□□□□□ -0.17
USP44-203ENST00000537435 CHRNA6Q15825 494 aa14.02□□□□□ -0.17
USP44-203ENST00000537435 USP39Q53GS9 565 aaKnown RBP14.02□□□□□ -0.17
USP44-203ENST00000537435 RBM48Q5RL73 367 aaKnown RBP14.02□□□□□ -0.17
USP44-203ENST00000537435 XAF1Q6GPH4 301 aa14.02□□□□□ -0.17
USP44-203ENST00000537435 SPESP1Q6UW49 350 aa14.02□□□□□ -0.17
USP44-203ENST00000537435 XKR5Q6UX68 686 aa14.02□□□□□ -0.17
USP44-203ENST00000537435 GCNT7Q6ZNI0 430 aa14.02□□□□□ -0.17
USP44-203ENST00000537435 RNF165Q6ZSG1 346 aa14.02□□□□□ -0.17
USP44-203ENST00000537435 MICU2Q8IYU8 434 aa14.02□□□□□ -0.17
USP44-203ENST00000537435 UBTD2Q8WUN7 234 aa14.02□□□□□ -0.17
USP44-203ENST00000537435 NCLNQ969V3 563 aa14.02□□□□□ -0.17
USP44-203ENST00000537435 MBOAT4Q96T53 435 aa14.02□□□□□ -0.17
USP44-203ENST00000537435 AMBRA1Q9C0C7 1298 aa14.02□□□□□ -0.17
USP44-203ENST00000537435 PAIP1Q9H074 479 aaKnown RBP14.02□□□□□ -0.17
USP44-203ENST00000537435 DNMT3BQ9UBC3 853 aaKnown RBP14.02□□□□□ -0.17
USP44-203ENST00000537435 STOML2Q9UJZ1 356 aa14.02□□□□□ -0.17
USP44-203ENST00000537435 TRBV5-4A0A0C4DH59 114 aa14.01□□□□□ -0.17
USP44-203ENST00000537435 GLYATL1P3A0A0U1RQE8 302 aa14.01□□□□□ -0.17
USP44-203ENST00000537435 SEC14L2O76054 403 aa14.01□□□□□ -0.17
USP44-203ENST00000537435 SCELO95171 688 aa14.01□□□□□ -0.17
USP44-203ENST00000537435 ZNF182P17025 639 aaPredicted RBP14.01□□□□□ -0.17
USP44-203ENST00000537435 MAP4P27816 1152 aaKnown RBP14.01□□□□□ -0.17
USP44-203ENST00000537435 HNF1BP35680 557 aa14.01□□□□□ -0.17
USP44-203ENST00000537435 NFATC3Q12968 1075 aa14.01□□□□□ -0.17
USP44-203ENST00000537435 ARHGEF7Q14155 803 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms