RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 ACY1Q03154 408 aa16.69■□□□□ 0.26
SFSWAP-205ENST00000537164 BRD3Q15059 726 aa16.69■□□□□ 0.26
SFSWAP-205ENST00000537164 SYTL3Q4VX76 610 aa16.69■□□□□ 0.26
SFSWAP-205ENST00000537164 DNAJC21Q5F1R6 531 aaKnown RBP16.69■□□□□ 0.26
SFSWAP-205ENST00000537164 RNF187Q5TA31 235 aaPredicted RBP16.69■□□□□ 0.26
SFSWAP-205ENST00000537164 CES3Q6UWW8 571 aa16.69■□□□□ 0.26
SFSWAP-205ENST00000537164 NAPRTQ6XQN6 538 aa16.69■□□□□ 0.26
SFSWAP-205ENST00000537164 SDCCAG8Q86SQ7 713 aaPredicted RBP16.69■□□□□ 0.26
SFSWAP-205ENST00000537164 PPP1R3BQ86XI6 285 aa16.69■□□□□ 0.26
SFSWAP-205ENST00000537164 CREG2Q8IUH2 290 aa16.69■□□□□ 0.26
SFSWAP-205ENST00000537164 PPIL6Q8IXY8 311 aa16.69■□□□□ 0.26
SFSWAP-205ENST00000537164 ESX1Q8N693 406 aa16.69■□□□□ 0.26
SFSWAP-205ENST00000537164 ZSCAN1Q8NBB4 408 aa16.69■□□□□ 0.26
SFSWAP-205ENST00000537164 LKAAEAR1Q8TD35 194 aa16.69■□□□□ 0.26
SFSWAP-205ENST00000537164 BIRC8Q96P09 236 aa16.69■□□□□ 0.26
SFSWAP-205ENST00000537164 PANX3Q96QZ0 392 aa16.69■□□□□ 0.26
SFSWAP-205ENST00000537164 ULBP3Q9BZM4 244 aa16.69■□□□□ 0.26
SFSWAP-205ENST00000537164 PDE7BQ9NP56 450 aa16.69■□□□□ 0.26
SFSWAP-205ENST00000537164 GNPTGQ9UJJ9 305 aa16.69■□□□□ 0.26
SFSWAP-205ENST00000537164 PYCARDQ9ULZ3 195 aa16.69■□□□□ 0.26
SFSWAP-205ENST00000537164 ICKQ9UPZ9 632 aa16.69■□□□□ 0.26
SFSWAP-205ENST00000537164 IQCF5A8MTL0 148 aa16.68■□□□□ 0.26
SFSWAP-205ENST00000537164 KPNA5O15131 536 aa16.68■□□□□ 0.26
SFSWAP-205ENST00000537164 NDUFS3O75489 264 aa16.68■□□□□ 0.26
SFSWAP-205ENST00000537164 SPAG6O75602 509 aa16.68■□□□□ 0.26
SFSWAP-205ENST00000537164 APOA4P06727 396 aa16.68■□□□□ 0.26
SFSWAP-205ENST00000537164 LIFP15018 202 aa16.68■□□□□ 0.26
SFSWAP-205ENST00000537164 ZNF28P17035 718 aa16.68■□□□□ 0.26
SFSWAP-205ENST00000537164 PAMP19021 973 aa16.68■□□□□ 0.26
SFSWAP-205ENST00000537164 OGNP20774 298 aaKnown RBP16.68■□□□□ 0.26
SFSWAP-205ENST00000537164 SHMT2P34897 504 aa16.68■□□□□ 0.26
SFSWAP-205ENST00000537164 STAT5AP42229 794 aa16.68■□□□□ 0.26
SFSWAP-205ENST00000537164 GNG11P61952 73 aa16.68■□□□□ 0.26
SFSWAP-205ENST00000537164 HSPA14Q0VDF9 509 aa16.68■□□□□ 0.26
SFSWAP-205ENST00000537164 PRKG2Q13237 762 aa16.68■□□□□ 0.26
SFSWAP-205ENST00000537164 TUBB3Q13509 450 aa16.68■□□□□ 0.26
SFSWAP-205ENST00000537164 ANKRD20A4Q4UJ75 823 aa16.68■□□□□ 0.26
SFSWAP-205ENST00000537164 RNASEH2BQ5TBB1 312 aaKnown RBP16.68■□□□□ 0.26
SFSWAP-205ENST00000537164 KIAA1614Q5VZ46 1190 aa16.68■□□□□ 0.26
SFSWAP-205ENST00000537164 VRK3Q8IV63 474 aa16.68■□□□□ 0.26
SFSWAP-205ENST00000537164 AGGF1Q8N302 714 aaeCLIP16.68■□□□□ 0.26
SFSWAP-205ENST00000537164 OR8K5Q8NH50 307 aa16.68■□□□□ 0.26
SFSWAP-205ENST00000537164 SLC39A7Q92504 469 aa16.68■□□□□ 0.26
SFSWAP-205ENST00000537164 LPGAT1Q92604 370 aa16.68■□□□□ 0.26
SFSWAP-205ENST00000537164 SLC45A3Q96JT2 553 aa16.68■□□□□ 0.26
SFSWAP-205ENST00000537164 SIGLEC10Q96LC7 697 aa16.68■□□□□ 0.26
SFSWAP-205ENST00000537164 NRTNQ99748 197 aa16.68■□□□□ 0.26
SFSWAP-205ENST00000537164 HGH1Q9BTY7 390 aa16.68■□□□□ 0.26
SFSWAP-205ENST00000537164 EFHD1Q9BUP0 239 aa16.68■□□□□ 0.26
SFSWAP-205ENST00000537164 SLC12A9Q9BXP2 914 aa16.68■□□□□ 0.26
SFSWAP-205ENST00000537164 DDX47Q9H0S4 455 aaKnown RBP16.68■□□□□ 0.26
SFSWAP-205ENST00000537164 FGF21Q9NSA1 209 aa16.68■□□□□ 0.26
SFSWAP-205ENST00000537164 KCND1Q9NSA2 647 aa16.68■□□□□ 0.26
SFSWAP-205ENST00000537164 OR6C2Q9NZP2 312 aa16.68■□□□□ 0.26
SFSWAP-205ENST00000537164 SAMD15Q9P1V8 674 aa16.68■□□□□ 0.26
SFSWAP-205ENST00000537164 RARRES3Q9UL19 164 aa16.68■□□□□ 0.26
SFSWAP-205ENST00000537164 SNRNP200O75643 2136 aaKnown RBP16.67■□□□□ 0.26
SFSWAP-205ENST00000537164 LOC101059948A0A1B0GTJ6 334 aa16.67■□□□□ 0.26
SFSWAP-205ENST00000537164 ZCWPW2A0A1B0GU75 182 aa16.67■□□□□ 0.26
SFSWAP-205ENST00000537164 C2orf74A8MZ97 194 aa16.67■□□□□ 0.26
SFSWAP-205ENST00000537164 PFDN6O15212 129 aa16.67■□□□□ 0.26
SFSWAP-205ENST00000537164 EBLN1P0CF75 366 aa16.67■□□□□ 0.26
SFSWAP-205ENST00000537164 IVDP26440 423 aa16.67■□□□□ 0.26
SFSWAP-205ENST00000537164 TERF1P54274 439 aa16.67■□□□□ 0.26
SFSWAP-205ENST00000537164 TUBB4BP68371 445 aa16.67■□□□□ 0.26
SFSWAP-205ENST00000537164 PTK6Q13882 451 aa16.67■□□□□ 0.26
SFSWAP-205ENST00000537164 TUBB2AQ13885 445 aa16.67■□□□□ 0.26
SFSWAP-205ENST00000537164 KCNAB1Q14722 419 aa16.67■□□□□ 0.26
SFSWAP-205ENST00000537164 CRTC2Q53ET0 693 aaPredicted RBP16.67■□□□□ 0.26
SFSWAP-205ENST00000537164 CTSL3PQ5NE16 218 aa16.67■□□□□ 0.26
SFSWAP-205ENST00000537164 PTRHD1Q6GMV3 140 aaKnown RBP16.67■□□□□ 0.26
SFSWAP-205ENST00000537164 UNC5DQ6UXZ4 953 aa16.67■□□□□ 0.26
SFSWAP-205ENST00000537164 CILP2Q8IUL8 1156 aa16.67■□□□□ 0.26
SFSWAP-205ENST00000537164 RASGRP3Q8IV61 690 aa16.67■□□□□ 0.26
SFSWAP-205ENST00000537164 KRT222Q8N1A0 295 aa16.67■□□□□ 0.26
SFSWAP-205ENST00000537164 ZNF501Q96CX3 271 aaPredicted RBP16.67■□□□□ 0.26
SFSWAP-205ENST00000537164 PPM1MQ96MI6 270 aa16.67■□□□□ 0.26
SFSWAP-205ENST00000537164 NAPGQ99747 312 aaPredicted RBP16.67■□□□□ 0.26
SFSWAP-205ENST00000537164 MENTQ9BUN1 341 aa16.67■□□□□ 0.26
SFSWAP-205ENST00000537164 TUBB2BQ9BVA1 445 aa16.67■□□□□ 0.26
SFSWAP-205ENST00000537164 SYTL2Q9HCH5 934 aa16.67■□□□□ 0.26
SFSWAP-205ENST00000537164 LATS2Q9NRM7 1088 aa16.67■□□□□ 0.26
SFSWAP-205ENST00000537164 SAR1BQ9Y6B6 198 aa16.67■□□□□ 0.26
SFSWAP-205ENST00000537164 COL6A6A6NMZ7 2263 aa16.66■□□□□ 0.26
SFSWAP-205ENST00000537164 GOLGA8KD6RF30 607 aa16.66■□□□□ 0.26
SFSWAP-205ENST00000537164 H3BMM5 538 aa16.66■□□□□ 0.26
SFSWAP-205ENST00000537164 GOLGA8TH3BQL2 631 aa16.66■□□□□ 0.26
SFSWAP-205ENST00000537164 GOLGA8MH3BSY2 632 aa16.66■□□□□ 0.26
SFSWAP-205ENST00000537164 DNALI1O14645 258 aaPredicted RBP16.66■□□□□ 0.26
SFSWAP-205ENST00000537164 TERTO14746 1132 aaKnown RBP16.66■□□□□ 0.26
SFSWAP-205ENST00000537164 KDM1AO60341 852 aa16.66■□□□□ 0.26
SFSWAP-205ENST00000537164 USP1O94782 785 aa16.66■□□□□ 0.26
SFSWAP-205ENST00000537164 KIAA0754O94854 1291 aa16.66■□□□□ 0.26
SFSWAP-205ENST00000537164 TIAF1O95411 115 aa16.66■□□□□ 0.26
SFSWAP-205ENST00000537164 ESR1P03372 595 aa16.66■□□□□ 0.26
SFSWAP-205ENST00000537164 MT-ND3P03897 115 aa16.66■□□□□ 0.26
SFSWAP-205ENST00000537164 RPN2P04844 631 aa16.66■□□□□ 0.26
SFSWAP-205ENST00000537164 ITGB6P18564 788 aa16.66■□□□□ 0.26
SFSWAP-205ENST00000537164 CDH3P22223 829 aa16.66■□□□□ 0.26
SFSWAP-205ENST00000537164 PTGIRP43119 386 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms