RNA–Protein interactions for RNA: ENST00000537024.5

SNHG1-203, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 532 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-203ENST00000537024 PTPN2P17706 415 aa4.02□□□□□ -1.77
SNHG1-203ENST00000537024 YWHAQP27348 245 aa4.02□□□□□ -1.77
SNHG1-203ENST00000537024 GCH1P30793 250 aa4.02□□□□□ -1.77
SNHG1-203ENST00000537024 ACSL1P33121 698 aa4.02□□□□□ -1.77
SNHG1-203ENST00000537024 NNMTP40261 264 aa4.02□□□□□ -1.77
SNHG1-203ENST00000537024 GABRB2P47870 512 aa4.02□□□□□ -1.77
SNHG1-203ENST00000537024 CLCN3P51790 818 aa4.02□□□□□ -1.77
SNHG1-203ENST00000537024 EFNA5P52803 228 aa4.02□□□□□ -1.77
SNHG1-203ENST00000537024 SLC12A2P55011 1212 aa4.02□□□□□ -1.77
SNHG1-203ENST00000537024 NLRP11P59045 1033 aaKnown RBP4.02□□□□□ -1.77
SNHG1-203ENST00000537024 POU5F1Q01860 360 aaKnown RBP4.02□□□□□ -1.77
SNHG1-203ENST00000537024 ZNF33AQ06730 810 aa4.02□□□□□ -1.77
SNHG1-203ENST00000537024 CSTF3Q12996 717 aaKnown RBP4.02□□□□□ -1.77
SNHG1-203ENST00000537024 BECN1Q14457 450 aa4.02□□□□□ -1.77
SNHG1-203ENST00000537024 HIST2H2ACQ16777 129 aaPredicted RBP4.02□□□□□ -1.77
SNHG1-203ENST00000537024 PLEKHS1Q5SXH7 462 aa4.02□□□□□ -1.77
SNHG1-203ENST00000537024 HES3Q5TGS1 186 aa4.02□□□□□ -1.77
SNHG1-203ENST00000537024 PRAMEF17Q5VTA0 474 aa4.02□□□□□ -1.77
SNHG1-203ENST00000537024 IGFL4Q6B9Z1 124 aa4.02□□□□□ -1.77
SNHG1-203ENST00000537024 TWF2Q6IBS0 349 aaKnown RBP4.02□□□□□ -1.77
SNHG1-203ENST00000537024 CPLX2Q6PUV4 134 aaKnown RBP4.02□□□□□ -1.77
SNHG1-203ENST00000537024 PLPPR4Q7Z2D5 763 aa4.02□□□□□ -1.77
SNHG1-203ENST00000537024 HAUS6Q7Z4H7 955 aa4.02□□□□□ -1.77
SNHG1-203ENST00000537024 AACSQ86V21 672 aa4.02□□□□□ -1.77
SNHG1-203ENST00000537024 IGFN1Q86VF2 1251 aa4.02□□□□□ -1.77
SNHG1-203ENST00000537024 CHSY1Q86X52 802 aa4.02□□□□□ -1.77
SNHG1-203ENST00000537024 ARHGAP12Q8IWW6 846 aa4.02□□□□□ -1.77
SNHG1-203ENST00000537024 ADGRF4Q8IZF3 695 aa4.02□□□□□ -1.77
SNHG1-203ENST00000537024 ARL14EPQ8N8R7 260 aaPredicted RBP4.02□□□□□ -1.77
SNHG1-203ENST00000537024 LNX1Q8TBB1 728 aaPredicted RBP4.02□□□□□ -1.77
SNHG1-203ENST00000537024 SSC4DQ8WTU2 575 aa4.02□□□□□ -1.77
SNHG1-203ENST00000537024 ZNF578Q96N58 590 aaPredicted RBP4.02□□□□□ -1.77
SNHG1-203ENST00000537024 WDFY2Q96P53 400 aa4.02□□□□□ -1.77
SNHG1-203ENST00000537024 LRRC3BQ96PB8 259 aa4.02□□□□□ -1.77
SNHG1-203ENST00000537024 EFHD1Q9BUP0 239 aa4.02□□□□□ -1.77
SNHG1-203ENST00000537024 ZNF747Q9BV97 191 aa4.02□□□□□ -1.77
SNHG1-203ENST00000537024 STRA6Q9BX79 667 aa4.02□□□□□ -1.77
SNHG1-203ENST00000537024 LRRCC1Q9C099 1032 aa4.02□□□□□ -1.77
SNHG1-203ENST00000537024 AZI2Q9H6S1 392 aa4.02□□□□□ -1.77
SNHG1-203ENST00000537024 ACTR5Q9H9F9 607 aaPredicted RBP4.02□□□□□ -1.77
SNHG1-203ENST00000537024 SCPEP1Q9HB40 452 aa4.02□□□□□ -1.77
SNHG1-203ENST00000537024 PAG1Q9NWQ8 432 aa4.02□□□□□ -1.77
SNHG1-203ENST00000537024 CTNNAL1Q9UBT7 734 aa4.02□□□□□ -1.77
SNHG1-203ENST00000537024 SERGEFQ9UGK8 458 aa4.02□□□□□ -1.77
SNHG1-203ENST00000537024 CHORDC1Q9UHD1 332 aaPredicted RBP4.02□□□□□ -1.77
SNHG1-203ENST00000537024 ADAM28Q9UKQ2 775 aa4.02□□□□□ -1.77
SNHG1-203ENST00000537024 ADAM18Q9Y3Q7 739 aa4.02□□□□□ -1.77
SNHG1-203ENST00000537024 PCDHGA1Q9Y5H4 931 aa4.02□□□□□ -1.77
SNHG1-203ENST00000537024 CCDC168Q8NDH2 2452 aa4.02□□□□□ -1.77
SNHG1-203ENST00000537024 SF3B1O75533 1304 aaKnown RBP eCLIP4.01□□□□□ -1.772e-7■■■■□ 23.8
SNHG1-203ENST00000537024 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.01□□□□□ -1.77
SNHG1-203ENST00000537024 FRMD3A2A2Y4 597 aa4.01□□□□□ -1.77
SNHG1-203ENST00000537024 USP17L23D6RBM5 183 aa4.01□□□□□ -1.77
SNHG1-203ENST00000537024 SURF6O75683 361 aaKnown RBP4.01□□□□□ -1.77
SNHG1-203ENST00000537024 IPO7O95373 1038 aaKnown RBP4.01□□□□□ -1.77
SNHG1-203ENST00000537024 LCKP06239 509 aa4.01□□□□□ -1.77
SNHG1-203ENST00000537024 HEXAP06865 529 aa4.01□□□□□ -1.77
SNHG1-203ENST00000537024 POLR2MP0CAP2 368 aa4.01□□□□□ -1.77
SNHG1-203ENST00000537024 GJA1P17302 382 aa4.01□□□□□ -1.77
SNHG1-203ENST00000537024 TNFRSF1AP19438 455 aa4.01□□□□□ -1.77
SNHG1-203ENST00000537024 MCM3P25205 808 aa4.01□□□□□ -1.77
SNHG1-203ENST00000537024 CIITAP33076 1130 aa4.01□□□□□ -1.77
SNHG1-203ENST00000537024 PTGER1P34995 402 aa4.01□□□□□ -1.77
SNHG1-203ENST00000537024 EIF2DP41214 584 aaKnown RBP4.01□□□□□ -1.77
SNHG1-203ENST00000537024 GARSP41250 739 aaKnown RBP4.01□□□□□ -1.77
SNHG1-203ENST00000537024 SLC26A2P50443 739 aa4.01□□□□□ -1.77
SNHG1-203ENST00000537024 GPC3P51654 580 aa4.01□□□□□ -1.77
SNHG1-203ENST00000537024 CLCNKBP51801 687 aa4.01□□□□□ -1.77
SNHG1-203ENST00000537024 CDH8P55286 799 aa4.01□□□□□ -1.77
SNHG1-203ENST00000537024 YPEL5P62699 121 aa4.01□□□□□ -1.77
SNHG1-203ENST00000537024 IFI35P80217 286 aaPredicted RBP4.01□□□□□ -1.77
SNHG1-203ENST00000537024 NIPAL4Q0D2K0 466 aa4.01□□□□□ -1.77
SNHG1-203ENST00000537024 PMPCAQ10713 525 aa4.01□□□□□ -1.77
SNHG1-203ENST00000537024 LRMPQ12912 555 aa4.01□□□□□ -1.77
SNHG1-203ENST00000537024 AIMP2Q13155 320 aaKnown RBP4.01□□□□□ -1.77
SNHG1-203ENST00000537024 RUNX2Q13950 521 aa4.01□□□□□ -1.77
SNHG1-203ENST00000537024 RNPS1Q15287 305 aaKnown RBP4.01□□□□□ -1.77
SNHG1-203ENST00000537024 TEAD2Q15562 447 aa4.01□□□□□ -1.77
SNHG1-203ENST00000537024 TXNDC8Q6A555 127 aa4.01□□□□□ -1.77
SNHG1-203ENST00000537024 GPR139Q6DWJ6 353 aa4.01□□□□□ -1.77
SNHG1-203ENST00000537024 SLC30A6Q6NXT4 461 aa4.01□□□□□ -1.77
SNHG1-203ENST00000537024 CHST9Q7L1S5 443 aa4.01□□□□□ -1.77
SNHG1-203ENST00000537024 ZNF627Q7L945 461 aa4.01□□□□□ -1.77
SNHG1-203ENST00000537024 DEFB119Q8N690 84 aa4.01□□□□□ -1.77
SNHG1-203ENST00000537024 OSR1Q8TAX0 266 aaPredicted RBP4.01□□□□□ -1.77
SNHG1-203ENST00000537024 TMEM170AQ8WVE7 144 aa4.01□□□□□ -1.77
SNHG1-203ENST00000537024 PSPC1Q8WXF1 523 aaKnown RBP4.01□□□□□ -1.77
SNHG1-203ENST00000537024 KAT2AQ92830 837 aa4.01□□□□□ -1.77
SNHG1-203ENST00000537024 SARAFQ96BY9 339 aa4.01□□□□□ -1.77
SNHG1-203ENST00000537024 BBS4Q96RK4 519 aa4.01□□□□□ -1.77
SNHG1-203ENST00000537024 NCAPGQ9BPX3 1015 aa4.01□□□□□ -1.77
SNHG1-203ENST00000537024 AP1M1Q9BXS5 423 aa4.01□□□□□ -1.77
SNHG1-203ENST00000537024 NUF2Q9BZD4 464 aa4.01□□□□□ -1.77
SNHG1-203ENST00000537024 KLK15Q9H2R5 256 aa4.01□□□□□ -1.77
SNHG1-203ENST00000537024 POLR1BQ9H9Y6 1135 aa4.01□□□□□ -1.77
SNHG1-203ENST00000537024 ZNF304Q9HCX3 659 aa4.01□□□□□ -1.77
SNHG1-203ENST00000537024 MLXIPLQ9NP71 852 aa4.01□□□□□ -1.77
SNHG1-203ENST00000537024 HPS4Q9NQG7 708 aa4.01□□□□□ -1.77
SNHG1-203ENST00000537024 NFKBIL1Q9UBC1 381 aaPredicted RBP4.01□□□□□ -1.77
SNHG1-203ENST00000537024 MMP17Q9ULZ9 603 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms