RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 SFMBT2Q5VUG0 894 aa5.12□□□□□ -1.59
PRKDC-208ENST00000536710 MOXD1Q6UVY6 613 aa5.12□□□□□ -1.59
PRKDC-208ENST00000536710 DGLUCYQ7Z3D6 616 aa5.12□□□□□ -1.59
PRKDC-208ENST00000536710 PIWIL4Q7Z3Z4 852 aaKnown RBP5.12□□□□□ -1.59
PRKDC-208ENST00000536710 ARHGAP22Q7Z5H3 698 aa5.12□□□□□ -1.59
PRKDC-208ENST00000536710 SPATA19Q7Z5L4 167 aa5.12□□□□□ -1.59
PRKDC-208ENST00000536710 TMPRSS11BQ86T26 416 aa5.12□□□□□ -1.59
PRKDC-208ENST00000536710 GDAP1Q8TB36 358 aa5.12□□□□□ -1.59
PRKDC-208ENST00000536710 RNF128Q8TEB7 428 aa5.12□□□□□ -1.59
PRKDC-208ENST00000536710 SCARB1Q8WTV0 552 aa5.12□□□□□ -1.59
PRKDC-208ENST00000536710 SSMEM1Q8WWF3 244 aa5.12□□□□□ -1.59
PRKDC-208ENST00000536710 ZBTB9Q96C00 473 aa5.12□□□□□ -1.59
PRKDC-208ENST00000536710 INTS14Q96SY0 518 aa5.12□□□□□ -1.59
PRKDC-208ENST00000536710 GPATCH1Q9BRR8 931 aaKnown RBP5.12□□□□□ -1.59
PRKDC-208ENST00000536710 RSPH9Q9H1X1 276 aaPredicted RBP5.12□□□□□ -1.59
PRKDC-208ENST00000536710 ACKR4Q9NPB9 350 aa5.12□□□□□ -1.59
PRKDC-208ENST00000536710 SLC38A7Q9NVC3 462 aa5.12□□□□□ -1.59
PRKDC-208ENST00000536710 DNAJB9Q9UBS3 223 aa5.12□□□□□ -1.59
PRKDC-208ENST00000536710 SNX7Q9UNH6 387 aa5.12□□□□□ -1.59
PRKDC-208ENST00000536710 A0A1W2PPQ1 181 aa5.11□□□□□ -1.59
PRKDC-208ENST00000536710 PLSCR5A0PG75 271 aa5.11□□□□□ -1.59
PRKDC-208ENST00000536710 HTR3EA5X5Y0 456 aa5.11□□□□□ -1.59
PRKDC-208ENST00000536710 PTGESO14684 152 aa5.11□□□□□ -1.59
PRKDC-208ENST00000536710 SLC7A4O43246 635 aa5.11□□□□□ -1.59
PRKDC-208ENST00000536710 AP5Z1O43299 807 aa5.11□□□□□ -1.59
PRKDC-208ENST00000536710 SMIM18P0DKX4 95 aa5.11□□□□□ -1.59
PRKDC-208ENST00000536710 T-ENOLP0DO92 83 aa5.11□□□□□ -1.59
PRKDC-208ENST00000536710 CD22P20273 847 aa5.11□□□□□ -1.59
PRKDC-208ENST00000536710 ATP5DP30049 168 aa5.11□□□□□ -1.59
PRKDC-208ENST00000536710 FUT6P51993 359 aa5.11□□□□□ -1.59
PRKDC-208ENST00000536710 ART1P52961 327 aa5.11□□□□□ -1.59
PRKDC-208ENST00000536710 PRKCZQ05513 592 aa5.11□□□□□ -1.59
PRKDC-208ENST00000536710 MBTD1Q05BQ5 628 aa5.11□□□□□ -1.59
PRKDC-208ENST00000536710 KIF5AQ12840 1032 aa5.11□□□□□ -1.59
PRKDC-208ENST00000536710 C6orf136Q5SQH8 315 aa5.11□□□□□ -1.59
PRKDC-208ENST00000536710 PRR27Q6MZM9 219 aa5.11□□□□□ -1.59
PRKDC-208ENST00000536710 KCTD8Q6ZWB6 473 aa5.11□□□□□ -1.59
PRKDC-208ENST00000536710 CCDC91Q7Z6B0 441 aa5.11□□□□□ -1.59
PRKDC-208ENST00000536710 SLC9B2Q86UD5 537 aa5.11□□□□□ -1.59
PRKDC-208ENST00000536710 KLHL7Q8IXQ5 586 aa5.11□□□□□ -1.59
PRKDC-208ENST00000536710 CPSF7Q8N684 471 aaKnown RBP5.11□□□□□ -1.59
PRKDC-208ENST00000536710 TMCO5AQ8N6Q1 288 aa5.11□□□□□ -1.59
PRKDC-208ENST00000536710 SECTM1Q8WVN6 248 aa5.11□□□□□ -1.59
PRKDC-208ENST00000536710 EXOC4Q96A65 974 aa5.11□□□□□ -1.59
PRKDC-208ENST00000536710 THOC1Q96FV9 657 aaKnown RBP5.11□□□□□ -1.59
PRKDC-208ENST00000536710 IGSF21Q96ID5 467 aa5.11□□□□□ -1.59
PRKDC-208ENST00000536710 THOC3Q96J01 351 aaKnown RBP5.11□□□□□ -1.59
PRKDC-208ENST00000536710 LRRC3BQ96PB8 259 aa5.11□□□□□ -1.59
PRKDC-208ENST00000536710 BTBD10Q9BSF8 475 aa5.11□□□□□ -1.59
PRKDC-208ENST00000536710 FN3KQ9H479 309 aa5.11□□□□□ -1.59
PRKDC-208ENST00000536710 COPS7BQ9H9Q2 264 aaPredicted RBP5.11□□□□□ -1.59
PRKDC-208ENST00000536710 FKRPQ9H9S5 495 aa5.11□□□□□ -1.59
PRKDC-208ENST00000536710 OLFML3Q9NRN5 406 aa5.11□□□□□ -1.59
PRKDC-208ENST00000536710 DDX43Q9NXZ2 648 aaKnown RBP5.11□□□□□ -1.59
PRKDC-208ENST00000536710 B3GAT1Q9P2W7 334 aa5.11□□□□□ -1.59
PRKDC-208ENST00000536710 ASPDHA6ND91 283 aa5.1□□□□□ -1.59
PRKDC-208ENST00000536710 C5orf60A6NFR6 353 aa5.1□□□□□ -1.59
PRKDC-208ENST00000536710 NEMP2A6NFY4 417 aa5.1□□□□□ -1.59
PRKDC-208ENST00000536710 H0YAE9 185 aa5.1□□□□□ -1.59
PRKDC-208ENST00000536710 PDE9AO76083 593 aa5.1□□□□□ -1.59
PRKDC-208ENST00000536710 MOCS3O95396 460 aa5.1□□□□□ -1.59
PRKDC-208ENST00000536710 SNHG28P0DPA3 235 aa5.1□□□□□ -1.59
PRKDC-208ENST00000536710 LHX1P48742 406 aa5.1□□□□□ -1.59
PRKDC-208ENST00000536710 DMPKQ09013 629 aa5.1□□□□□ -1.59
PRKDC-208ENST00000536710 MFAP5Q13361 173 aa5.1□□□□□ -1.59
PRKDC-208ENST00000536710 TUBB2AQ13885 445 aa5.1□□□□□ -1.59
PRKDC-208ENST00000536710 IZUMO4Q1ZYL8 232 aa5.1□□□□□ -1.59
PRKDC-208ENST00000536710 SIRPB2Q5JXA9 342 aa5.1□□□□□ -1.59
PRKDC-208ENST00000536710 PDSS1Q5T2R2 415 aa5.1□□□□□ -1.59
PRKDC-208ENST00000536710 FAM91A1Q658Y4 838 aa5.1□□□□□ -1.59
PRKDC-208ENST00000536710 NADSYN1Q6IA69 706 aa5.1□□□□□ -1.59
PRKDC-208ENST00000536710 TUBA1AQ71U36 451 aa5.1□□□□□ -1.59
PRKDC-208ENST00000536710 NUP54Q7Z3B4 507 aa5.1□□□□□ -1.59
PRKDC-208ENST00000536710 ABI3BPQ7Z7G0 1075 aa5.1□□□□□ -1.59
PRKDC-208ENST00000536710 SNX32Q86XE0 403 aa5.1□□□□□ -1.59
PRKDC-208ENST00000536710 FAM219AQ8IW50 185 aa5.1□□□□□ -1.59
PRKDC-208ENST00000536710 DCP1BQ8IZD4 617 aaKnown RBP5.1□□□□□ -1.59
PRKDC-208ENST00000536710 ANKRD13CQ8N6S4 541 aa5.1□□□□□ -1.59
PRKDC-208ENST00000536710 LNX1Q8TBB1 728 aaPredicted RBP5.1□□□□□ -1.59
PRKDC-208ENST00000536710 CCDC107Q8WV48 283 aa5.1□□□□□ -1.59
PRKDC-208ENST00000536710 NUDCD2Q8WVJ2 157 aa5.1□□□□□ -1.59
PRKDC-208ENST00000536710 MR1Q95460 341 aa5.1□□□□□ -1.59
PRKDC-208ENST00000536710 IL17FQ96PD4 163 aa5.1□□□□□ -1.59
PRKDC-208ENST00000536710 TUBA1CQ9BQE3 449 aa5.1□□□□□ -1.59
PRKDC-208ENST00000536710 TUBB2BQ9BVA1 445 aa5.1□□□□□ -1.59
PRKDC-208ENST00000536710 KRTAP4-9Q9BYQ8 210 aa5.1□□□□□ -1.59
PRKDC-208ENST00000536710 KRTAP4-7Q9BYR0 210 aa5.1□□□□□ -1.59
PRKDC-208ENST00000536710 C6orf106Q9H6K1 298 aaPredicted RBP5.1□□□□□ -1.59
PRKDC-208ENST00000536710 Q9N2K0 584 aa5.1□□□□□ -1.59
PRKDC-208ENST00000536710 SERINC1Q9NRX5 453 aa5.1□□□□□ -1.59
PRKDC-208ENST00000536710 KCNK7Q9Y2U2 307 aa5.1□□□□□ -1.59
PRKDC-208ENST00000536710 A0A1W2PRB8 838 aa5.09□□□□□ -1.59
PRKDC-208ENST00000536710 ENO4A6NNW6 628 aa5.09□□□□□ -1.59
PRKDC-208ENST00000536710 IGHV2-70P01814 119 aa5.09□□□□□ -1.59
PRKDC-208ENST00000536710 VIMP08670 466 aaKnown RBP5.09□□□□□ -1.59
PRKDC-208ENST00000536710 FAM58BPP0C7Q3 252 aa5.09□□□□□ -1.59
PRKDC-208ENST00000536710 ACAT1P24752 427 aaKnown RBP5.09□□□□□ -1.59
PRKDC-208ENST00000536710 PSMA3P25788 255 aa5.09□□□□□ -1.59
PRKDC-208ENST00000536710 TNFRSF8P28908 595 aa5.09□□□□□ -1.59
PRKDC-208ENST00000536710 FMO5P49326 533 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms