RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 MYO15AQ9UKN7 3530 aa3.27□□□□□ -1.89
SNHG1-202ENST00000535689 MYH7P12883 1935 aa3.27□□□□□ -1.89
SNHG1-202ENST00000535689 PCSK5Q92824 1860 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 CACNA1IQ9P0X4 2223 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 DENND3A2RUS2 1198 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 TMEM8BA6NDV4 472 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 LACTBL1A8MY62 500 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 A8MZ25 164 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 LDB2O43679 373 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 KLK8O60259 260 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 PTP4A3O75365 173 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 SEC31AO94979 1220 aaKnown RBP3.26□□□□□ -1.89
SNHG1-202ENST00000535689 NKX2-2O95096 273 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 CSH1P0DML2 217 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 CSH2P0DML3 217 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 AKR1B1P15121 316 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 ZNF23P17027 643 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 ITGAXP20702 1163 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 MCM3P25205 808 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 HNRNPH1P31943 449 aaKnown RBP3.26□□□□□ -1.89
SNHG1-202ENST00000535689 THPOP40225 353 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 SLC1A4P43007 532 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 NRIP1P48552 1158 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 ARSEP51690 589 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 CLCNKAP51800 687 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 GALCP54803 685 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 F2RL1P55085 397 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 SEC61BP60468 96 aaKnown RBP3.26□□□□□ -1.89
SNHG1-202ENST00000535689 CREB5Q02930 508 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 CRYZQ08257 329 aaKnown RBP3.26□□□□□ -1.89
SNHG1-202ENST00000535689 GRIK3Q13003 919 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 MYBPC2Q14324 1141 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 NTRK2Q16620 822 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 PNLIPRP3Q17RR3 467 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 SHROOM1Q2M3G4 852 aaPredicted RBP3.26□□□□□ -1.89
SNHG1-202ENST00000535689 ZNF260Q3ZCT1 412 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 AMZ1Q400G9 498 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 ATP13A5Q4VNC0 1218 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 SBK1Q52WX2 424 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 ASPRV1Q53RT3 343 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 SPOUT1Q5T280 376 aaKnown RBP3.26□□□□□ -1.89
SNHG1-202ENST00000535689 UBAP2Q5T6F2 1119 aaKnown RBP3.26□□□□□ -1.89
SNHG1-202ENST00000535689 MFSD4BQ5TF39 518 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 GPR139Q6DWJ6 353 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 CCNI2Q6ZMN8 369 aaPredicted RBP3.26□□□□□ -1.89
SNHG1-202ENST00000535689 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.26□□□□□ -1.89
SNHG1-202ENST00000535689 SEPT14Q6ZU15 432 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 PLEKHM3Q6ZWE6 761 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 CHST9Q7L1S5 443 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 FJX1Q86VR8 437 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 SRBD1Q8N5C6 995 aaKnown RBP3.26□□□□□ -1.89
SNHG1-202ENST00000535689 TMEM105Q8N8V8 129 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 PPFIBP2Q8ND30 876 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 RDM1Q8NG50 284 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 SCARB1Q8WTV0 552 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 SUSD6Q92537 303 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 ATP6V0A1Q93050 837 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 URB1-AS1Q96HZ7 61 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 RSRC1Q96IZ7 334 aaKnown RBP3.26□□□□□ -1.89
SNHG1-202ENST00000535689 C1orf74Q96LT6 269 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 ZNF778Q96MU6 729 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 RIOK1Q9BRS2 568 aaKnown RBP3.26□□□□□ -1.89
SNHG1-202ENST00000535689 ITPAQ9BY32 194 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 PDZD7Q9H5P4 517 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 CLK4Q9HAZ1 481 aaKnown RBP3.26□□□□□ -1.89
SNHG1-202ENST00000535689 LTB4R2Q9NPC1 389 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 MKKSQ9NPJ1 570 aaPredicted RBP3.26□□□□□ -1.89
SNHG1-202ENST00000535689 CNGB3Q9NQW8 809 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 GIMAP4Q9NUV9 329 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 OGFRQ9NZT2 677 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 OR14J1Q9UGF5 321 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 DBNLQ9UJU6 430 aaKnown RBP3.26□□□□□ -1.89
SNHG1-202ENST00000535689 GMEB2Q9UKD1 530 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 ANGPTL2Q9UKU9 493 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 MKLN1Q9UL63 735 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 CCPG1Q9ULG6 757 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 CDC14AQ9UNH5 594 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 VDAC3Q9Y277 283 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 SNX8Q9Y5X2 465 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 PTGDR2Q9Y5Y4 395 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 CAPN7Q9Y6W3 813 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 PIAS3Q9Y6X2 628 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 GVINP1Q7Z2Y8 2422 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 MTCL1Q9Y4B5 1905 aaKnown RBP3.26□□□□□ -1.89
SNHG1-202ENST00000535689 COL4A6Q14031 1691 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 CFAP47Q6ZTR5 3102 aa3.26□□□□□ -1.89
SNHG1-202ENST00000535689 ATG2AQ2TAZ0 1938 aa3.25□□□□□ -1.89
SNHG1-202ENST00000535689 MAP1BP46821 2468 aaKnown RBP3.25□□□□□ -1.89
SNHG1-202ENST00000535689 EIF4E1BA6NMX2 242 aaKnown RBP3.25□□□□□ -1.89
SNHG1-202ENST00000535689 M0QZ92 97 aa3.25□□□□□ -1.89
SNHG1-202ENST00000535689 HSPA12AO43301 675 aa3.25□□□□□ -1.89
SNHG1-202ENST00000535689 ZIC3O60481 467 aa3.25□□□□□ -1.89
SNHG1-202ENST00000535689 TBX10O75333 385 aa3.25□□□□□ -1.89
SNHG1-202ENST00000535689 SURF6O75683 361 aaKnown RBP3.25□□□□□ -1.89
SNHG1-202ENST00000535689 MLYCDO95822 493 aa3.25□□□□□ -1.89
SNHG1-202ENST00000535689 NDUFB10O96000 172 aa3.25□□□□□ -1.89
SNHG1-202ENST00000535689 TOMM40O96008 361 aa3.25□□□□□ -1.89
SNHG1-202ENST00000535689 LCATP04180 440 aa3.25□□□□□ -1.89
SNHG1-202ENST00000535689 ICAM1P05362 532 aa3.25□□□□□ -1.89
SNHG1-202ENST00000535689 TSPY3P0CV98 308 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms