RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 ILF2Q12905 390 aaKnown RBP12.44□□□□□ -0.42
SPG11-203ENST00000535302 C1orf189Q5VU69 101 aa12.44□□□□□ -0.42
SPG11-203ENST00000535302 CHRDL2Q6WN34 429 aa12.44□□□□□ -0.42
SPG11-203ENST00000535302 METTL3Q86U44 580 aaKnown RBP12.44□□□□□ -0.42
SPG11-203ENST00000535302 RASGRP3Q8IV61 690 aa12.44□□□□□ -0.42
SPG11-203ENST00000535302 HDDC3Q8N4P3 179 aa12.44□□□□□ -0.42
SPG11-203ENST00000535302 Q8N9G6 341 aaPredicted RBP12.44□□□□□ -0.42
SPG11-203ENST00000535302 LCN9Q8WX39 176 aa12.44□□□□□ -0.42
SPG11-203ENST00000535302 EFHD2Q96C19 240 aaPredicted RBP12.44□□□□□ -0.42
SPG11-203ENST00000535302 KXD1Q9BQD3 176 aa12.44□□□□□ -0.42
SPG11-203ENST00000535302 CENPMQ9NSP4 180 aa12.44□□□□□ -0.42
SPG11-203ENST00000535302 CCDC59Q9P031 241 aaKnown RBP12.44□□□□□ -0.42
SPG11-203ENST00000535302 AP3M1Q9Y2T2 418 aa12.44□□□□□ -0.42
SPG11-203ENST00000535302 FAM237AA0A1B0GTK4 181 aa12.44□□□□□ -0.42
SPG11-203ENST00000535302 MYOCOSA0A1B0GUC4 107 aa12.44□□□□□ -0.42
SPG11-203ENST00000535302 CPED1A4D0V7 1026 aa12.44□□□□□ -0.42
SPG11-203ENST00000535302 PIP5K1BO14986 540 aa12.44□□□□□ -0.42
SPG11-203ENST00000535302 SNX4O95219 450 aa12.44□□□□□ -0.42
SPG11-203ENST00000535302 NDST3O95803 873 aa12.44□□□□□ -0.42
SPG11-203ENST00000535302 PSKH1P11801 424 aa12.44□□□□□ -0.42
SPG11-203ENST00000535302 FAUP35544 74 aaKnown RBP12.44□□□□□ -0.42
SPG11-203ENST00000535302 MAPK12P53778 367 aa12.44□□□□□ -0.42
SPG11-203ENST00000535302 CDH12P55289 794 aa12.44□□□□□ -0.42
SPG11-203ENST00000535302 RPL6Q02878 288 aaKnown RBP12.44□□□□□ -0.42
SPG11-203ENST00000535302 CHIT1Q13231 466 aa12.44□□□□□ -0.42
SPG11-203ENST00000535302 ATAT1Q5SQI0 421 aa12.44□□□□□ -0.42
SPG11-203ENST00000535302 GCNT6Q5T4J0 391 aa12.44□□□□□ -0.42
SPG11-203ENST00000535302 SPRYD7Q5W111 196 aa12.44□□□□□ -0.42
SPG11-203ENST00000535302 PPP2R2DQ66LE6 453 aa12.44□□□□□ -0.42
SPG11-203ENST00000535302 ZNF598Q86UK7 904 aaKnown RBP12.44□□□□□ -0.42
SPG11-203ENST00000535302 SMURF1Q9HCE7 757 aa12.44□□□□□ -0.42
SPG11-203ENST00000535302 WRAP73Q9P2S5 460 aaPredicted RBP12.44□□□□□ -0.42
SPG11-203ENST00000535302 COMMD3Q9UBI1 195 aa12.44□□□□□ -0.42
SPG11-203ENST00000535302 PCDHA2Q9Y5H9 948 aa12.44□□□□□ -0.42
SPG11-203ENST00000535302 COMMD3-BMI1R4GMX3 469 aa12.44□□□□□ -0.42
SPG11-203ENST00000535302 DCCP43146 1447 aa12.44□□□□□ -0.42
SPG11-203ENST00000535302 AOC2O75106 756 aa12.44□□□□□ -0.42
SPG11-203ENST00000535302 NFATC1O95644 943 aa12.44□□□□□ -0.42
SPG11-203ENST00000535302 RHOQP17081 205 aa12.44□□□□□ -0.42
SPG11-203ENST00000535302 SMIM11AP58511 58 aa12.44□□□□□ -0.42
SPG11-203ENST00000535302 VBP1P61758 197 aa12.44□□□□□ -0.42
SPG11-203ENST00000535302 ARL13AQ5H913 290 aaPredicted RBP12.44□□□□□ -0.42
SPG11-203ENST00000535302 PHF19Q5T6S3 580 aa12.44□□□□□ -0.42
SPG11-203ENST00000535302 MPP5Q8N3R9 675 aa12.44□□□□□ -0.42
SPG11-203ENST00000535302 GNEQ9Y223 722 aaKnown RBP12.44□□□□□ -0.42
SPG11-203ENST00000535302 TMEM5Q9Y2B1 443 aa12.44□□□□□ -0.42
SPG11-203ENST00000535302 FER1L4A9Z1Z3 1794 aa12.44□□□□□ -0.42
SPG11-203ENST00000535302 GLTPD2A6NH11 291 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 DGKGP49619 791 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 CDH4P55283 916 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 ZNF234Q14588 700 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 HGSNATQ68CP4 663 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 HIST1H2AAQ96QV6 131 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 CLK4Q9HAZ1 481 aaKnown RBP12.43□□□□□ -0.42
SPG11-203ENST00000535302 TMEM51Q9NW97 253 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 VNN3Q9NY84 501 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 AJAP1Q9UKB5 411 aaPredicted RBP12.43□□□□□ -0.42
SPG11-203ENST00000535302 CLUHO75153 1309 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 KDM4FA0A1W2PPD8 638 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 B4DGG1 531 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 STK16O75716 305 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 FABP3P05413 133 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 CWF19L1Q69YN2 538 aaKnown RBP12.43□□□□□ -0.42
SPG11-203ENST00000535302 TMPRSS11AQ6ZMR5 421 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 CROCCP3Q8IVE0 287 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 HEXDCQ8WVB3 486 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 TMEM203Q969S6 136 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 SYT17Q9BSW7 474 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 METTL8Q9H825 291 aaKnown RBP12.43□□□□□ -0.42
SPG11-203ENST00000535302 SEC61A2Q9H9S3 476 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 AURKAO14965 403 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 TBX1O43435 398 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 SSX5O60225 188 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 RTP1P59025 263 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 RALGPS1Q5JS13 557 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 FSTL4Q6MZW2 842 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 TCAIMQ8N3R3 496 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 LRTOMTQ8WZ04 291 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 CDH22Q9UJ99 828 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 HIF3AQ9Y2N7 669 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 TMEM131LA2VDJ0 1609 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 AP2A1O95782 977 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 C8AP07357 584 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 CHRNB2P17787 502 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 MAGEA2P43356 314 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 ASPAP45381 313 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 LIPEQ05469 1076 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 EGFLAMQ63HQ2 1017 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 LBX2Q6XYB7 198 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 ASB18Q6ZVZ8 466 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 DTX3Q8N9I9 347 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 PHC3Q8NDX5 983 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 DBF4BQ8NFT6 615 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 DMTF1Q9Y222 760 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 E2F3O00716 465 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 PCDHGA12O60330 932 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 SNAP91O60641 907 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 LINGO3P0C6S8 592 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 TTKP33981 857 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 KIR3DL1P43629 444 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms